RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 RTL8BQ17RB0 113 aa10.57□□□□□ -0.72
CCDC7-202ENST00000302316 CLEC12BQ2HXU8 276 aa10.57□□□□□ -0.72
CCDC7-202ENST00000302316 CXorf66Q5JRM2 361 aaPredicted RBP10.57□□□□□ -0.72
CCDC7-202ENST00000302316 H2BFWTQ7Z2G1 175 aa10.57□□□□□ -0.72
CCDC7-202ENST00000302316 TGIF2LXQ8IUE1 241 aa10.57□□□□□ -0.72
CCDC7-202ENST00000302316 DMBX1Q8NFW5 382 aa10.57□□□□□ -0.72
CCDC7-202ENST00000302316 ST6GALNAC6Q969X2 333 aa10.57□□□□□ -0.72
CCDC7-202ENST00000302316 LPAR2Q9HBW0 351 aa10.57□□□□□ -0.72
CCDC7-202ENST00000302316 ASH1LQ9NR48 2969 aaKnown RBP10.57□□□□□ -0.72
CCDC7-202ENST00000302316 MMP26Q9NRE1 261 aa10.57□□□□□ -0.72
CCDC7-202ENST00000302316 SLC35D1Q9NTN3 355 aa10.57□□□□□ -0.72
CCDC7-202ENST00000302316 AMMECR1Q9Y4X0 333 aaPredicted RBP10.57□□□□□ -0.72
CCDC7-202ENST00000302316 KPTNQ9Y664 436 aa10.57□□□□□ -0.72
CCDC7-202ENST00000302316 ARHGAP32A7KAX9 2087 aa10.56□□□□□ -0.72
CCDC7-202ENST00000302316 RNF222A6NCQ9 220 aa10.56□□□□□ -0.72
CCDC7-202ENST00000302316 FAM157AC9JC47 383 aa10.56□□□□□ -0.72
CCDC7-202ENST00000302316 APOA2P02652 100 aa10.56□□□□□ -0.72
CCDC7-202ENST00000302316 P0C879 139 aa10.56□□□□□ -0.72
CCDC7-202ENST00000302316 C4BPBP20851 252 aa10.56□□□□□ -0.72
CCDC7-202ENST00000302316 KLRD1Q13241 179 aa10.56□□□□□ -0.72
CCDC7-202ENST00000302316 HIST2H2BCQ6DN03 193 aa10.56□□□□□ -0.72
CCDC7-202ENST00000302316 C1orf122Q6ZSJ8 110 aa10.56□□□□□ -0.72
CCDC7-202ENST00000302316 TMUB2Q71RG4 321 aa10.56□□□□□ -0.72
CCDC7-202ENST00000302316 VMO1Q7Z5L0 202 aa10.56□□□□□ -0.72
CCDC7-202ENST00000302316 ARL6Q9H0F7 186 aa10.56□□□□□ -0.72
CCDC7-202ENST00000302316 RCL1Q9Y2P8 373 aaKnown RBP10.56□□□□□ -0.72
CCDC7-202ENST00000302316 PITX3O75364 302 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 OR2F2O95006 317 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 NQO2P16083 231 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 S100A11P31949 105 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 NUP62P37198 522 aaPredicted RBP10.55□□□□□ -0.72
CCDC7-202ENST00000302316 POLR2GP62487 172 aaKnown RBP eCLIP10.55□□□□□ -0.72
CCDC7-202ENST00000302316 OR2F1Q13607 317 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 ZNF345Q14585 488 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 ACOT7LQ6ZUV0 252 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 SSX9Q7RTT3 188 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 OR4P4Q8NGL7 312 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 NABP2Q9BQ15 211 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 MAGT1Q9H0U3 335 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 HEXA-AS1Q9H8Q6 139 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 E5RGE8 158 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 H0YJW9 148 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 BUB1B-PAK6H3BSN5 160 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 H7C2Y5 167 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 WRBO00258 174 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 SSSCA1O60232 199 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 ARG1P05089 322 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 SLC25A16P16260 332 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 OPCMLQ14982 345 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 DHRS7BQ6IAN0 325 aaPredicted RBP10.55□□□□□ -0.72
CCDC7-202ENST00000302316 VKORC1L1Q8N0U8 176 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 OR11H6Q8NGC7 330 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 SIRPDQ9H106 197 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 BEX4Q9NWD9 120 aaPredicted RBP10.55□□□□□ -0.72
CCDC7-202ENST00000302316 COA4Q9NYJ1 87 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 NSG2Q9Y328 171 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 PTPN13Q12923 2485 aa10.55□□□□□ -0.72
CCDC7-202ENST00000302316 A0A0D9SG52 128 aa10.54□□□□□ -0.72
CCDC7-202ENST00000302316 MSGN1A6NI15 193 aa10.54□□□□□ -0.72
CCDC7-202ENST00000302316 RRASP10301 218 aa10.54□□□□□ -0.72
CCDC7-202ENST00000302316 DVL1P1P54792 670 aaPredicted RBP10.54□□□□□ -0.72
CCDC7-202ENST00000302316 IFITM2Q01629 132 aa10.54□□□□□ -0.72
CCDC7-202ENST00000302316 TAGLNQ01995 201 aaKnown RBP10.54□□□□□ -0.72
CCDC7-202ENST00000302316 ID3Q02535 119 aa10.54□□□□□ -0.72
CCDC7-202ENST00000302316 DEFB113Q30KQ7 82 aa10.54□□□□□ -0.72
CCDC7-202ENST00000302316 MIDNQ504T8 468 aa10.54□□□□□ -0.72
CCDC7-202ENST00000302316 PDZD9Q8IXQ8 264 aa10.54□□□□□ -0.72
CCDC7-202ENST00000302316 KCNRGQ8N5I3 272 aa10.54□□□□□ -0.72
CCDC7-202ENST00000302316 OR5AN1Q8NGI8 311 aa10.54□□□□□ -0.72
CCDC7-202ENST00000302316 RBMXL1Q96E39 390 aaKnown RBP10.54□□□□□ -0.72
CCDC7-202ENST00000302316 PCGF1Q9BSM1 259 aa10.54□□□□□ -0.72
CCDC7-202ENST00000302316 GON7Q9BXV9 100 aa10.54□□□□□ -0.72
CCDC7-202ENST00000302316 UNKLQ9H9P5 680 aaKnown RBP10.54□□□□□ -0.72
CCDC7-202ENST00000302316 CSMD2Q7Z408 3487 aa10.54□□□□□ -0.72
CCDC7-202ENST00000302316 ANKRD17O75179 2603 aaKnown RBP10.54□□□□□ -0.72
CCDC7-202ENST00000302316 RBMXL2O75526 392 aaKnown RBP10.54□□□□□ -0.72
CCDC7-202ENST00000302316 TOX4O94842 621 aa10.54□□□□□ -0.72
CCDC7-202ENST00000302316 IGKV1-16P04430 117 aa10.54□□□□□ -0.72
CCDC7-202ENST00000302316 PVALBP20472 110 aaPredicted RBP10.54□□□□□ -0.72
CCDC7-202ENST00000302316 RPEQ96AT9 228 aa10.54□□□□□ -0.72
CCDC7-202ENST00000302316 SLA2Q9H6Q3 261 aa10.54□□□□□ -0.72
CCDC7-202ENST00000302316 TMEM140Q9NV12 185 aa10.54□□□□□ -0.72
CCDC7-202ENST00000302316 POLR3KQ9Y2Y1 108 aaPredicted RBP10.54□□□□□ -0.72
CCDC7-202ENST00000302316 TXNL1O43396 289 aa10.53□□□□□ -0.72
CCDC7-202ENST00000302316 HRASP01112 189 aa10.53□□□□□ -0.72
CCDC7-202ENST00000302316 HOXB4P17483 251 aaPredicted RBP10.53□□□□□ -0.72
CCDC7-202ENST00000302316 VAMP2P63027 116 aa10.53□□□□□ -0.72
CCDC7-202ENST00000302316 HCP5Q6MZN7 132 aa10.53□□□□□ -0.72
CCDC7-202ENST00000302316 RHOVQ96L33 236 aa10.53□□□□□ -0.72
CCDC7-202ENST00000302316 AQP10Q96PS8 301 aa10.53□□□□□ -0.72
CCDC7-202ENST00000302316 ZC4H2Q9NQZ6 224 aa10.53□□□□□ -0.72
CCDC7-202ENST00000302316 POLQO75417 2590 aa10.53□□□□□ -0.72
CCDC7-202ENST00000302316 KANTRA0A1W2PQU2 76 aa10.52□□□□□ -0.72
CCDC7-202ENST00000302316 A0A1W2PRD5 423 aa10.52□□□□□ -0.72
CCDC7-202ENST00000302316 A0A1W2PRF3 423 aa10.52□□□□□ -0.72
CCDC7-202ENST00000302316 A0A1W2PRM7 423 aa10.52□□□□□ -0.72
CCDC7-202ENST00000302316 ODF3BA8MYP8 253 aa10.52□□□□□ -0.72
CCDC7-202ENST00000302316 RNASEK-C17orf49H0YIS7 233 aa10.52□□□□□ -0.72
CCDC7-202ENST00000302316 GAPDHP04406 335 aaKnown RBP10.52□□□□□ -0.72
CCDC7-202ENST00000302316 OR9G9P0C7N8 305 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms