RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 CCDC144NLQ6NUI1 221 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 TMED4Q7Z7H5 227 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 CENPSQ8N2Z9 138 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 CHPT1Q8WUD6 406 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 TCTEX1D2Q8WW35 142 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 ADTRPQ96IZ2 230 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 SCGB3A2Q96PL1 93 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 NAA60Q9H7X0 242 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 BEX1Q9HBH7 125 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 SLC35D1Q9NTN3 355 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 COPZ2Q9P299 210 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 C14orf166Q9Y224 244 aaKnown RBP7.57□□□□□ -1.2
RFX3-201ENST00000302303 NF1P21359 2839 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 TEX13DA0A0J9YY54 714 aaPredicted RBP7.57□□□□□ -1.2
RFX3-201ENST00000302303 C9orf170A2RU37 121 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 H0Y980 276 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 RBFOX2O43251 390 aaKnown RBP eCLIP7.57□□□□□ -1.2
RFX3-201ENST00000302303 CHST1O43916 411 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 FCGR3BO75015 233 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 PEX14O75381 377 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 SFT2D2O95562 160 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 CDS2O95674 445 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 CRYGBP07316 175 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 P0C879 139 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 MC5RP33032 325 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 DHRS2Q13268 280 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 SLC9A3R2Q15599 337 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 RGS21Q2M5E4 152 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 ANKRD55Q3KP44 614 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 ABCA11PQ4W5N1 156 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 PDPNQ86YL7 162 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 SPAG16Q8N0X2 631 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 OR52B4Q8NGK2 314 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 ENKURQ8TC29 256 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 TMEM222Q9H0R3 208 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 FAM212BQ9NTI7 297 aaPredicted RBP7.57□□□□□ -1.2
RFX3-201ENST00000302303 TCF19Q9Y242 345 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 WASHC3Q9Y3C0 194 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 A0A0G2JRQ6 117 aa7.56□□□□□ -1.2
RFX3-201ENST00000302303 INMT-MINDY4F8WBC2 141 aa7.56□□□□□ -1.2
RFX3-201ENST00000302303 S1PR2O95136 353 aa7.56□□□□□ -1.2
RFX3-201ENST00000302303 NDUFA3O95167 84 aa7.56□□□□□ -1.2
RFX3-201ENST00000302303 CRYZL1O95825 349 aa7.56□□□□□ -1.2
RFX3-201ENST00000302303 IL5P05113 134 aa7.56□□□□□ -1.2
RFX3-201ENST00000302303 LPAR6P43657 344 aa7.56□□□□□ -1.2
RFX3-201ENST00000302303 UBE2MP61081 183 aaKnown RBP7.56□□□□□ -1.2
RFX3-201ENST00000302303 SSBP2P81877 361 aaPredicted RBP7.56□□□□□ -1.2
RFX3-201ENST00000302303 TAGLNQ01995 201 aaKnown RBP7.56□□□□□ -1.2
RFX3-201ENST00000302303 HNF4GQ14541 408 aa7.56□□□□□ -1.2
RFX3-201ENST00000302303 POU2AF1Q16633 256 aa7.56□□□□□ -1.2
RFX3-201ENST00000302303 PLET1Q6UQ28 207 aa7.56□□□□□ -1.2
RFX3-201ENST00000302303 TMEM219Q86XT9 240 aa7.56□□□□□ -1.2
RFX3-201ENST00000302303 VKORC1L1Q8N0U8 176 aa7.56□□□□□ -1.2
RFX3-201ENST00000302303 TCTEX1D1Q8N7M0 179 aa7.56□□□□□ -1.2
RFX3-201ENST00000302303 Q8N9W7 124 aa7.56□□□□□ -1.2
RFX3-201ENST00000302303 CCDC71LQ8N9Z2 235 aa7.56□□□□□ -1.2
RFX3-201ENST00000302303 NPBQ8NG41 125 aa7.56□□□□□ -1.2
RFX3-201ENST00000302303 SEC22AQ96IW7 307 aa7.56□□□□□ -1.2
RFX3-201ENST00000302303 TMEM56Q96MV1 263 aa7.56□□□□□ -1.2
RFX3-201ENST00000302303 DUX5Q96PT3 197 aa7.56□□□□□ -1.2
RFX3-201ENST00000302303 SEC22CQ9BRL7 303 aa7.56□□□□□ -1.2
RFX3-201ENST00000302303 CHIAQ9BZP6 476 aa7.56□□□□□ -1.2
RFX3-201ENST00000302303 PLEKHA2Q9HB19 425 aa7.56□□□□□ -1.2
RFX3-201ENST00000302303 TMEM56-RWDD3S4R434 201 aa7.56□□□□□ -1.2
RFX3-201ENST00000302303 MOSP00540 346 aa7.55□□□□□ -1.2
RFX3-201ENST00000302303 IGKV1-5P01602 117 aa7.55□□□□□ -1.2
RFX3-201ENST00000302303 FAM106CPP0CH98 169 aa7.55□□□□□ -1.2
RFX3-201ENST00000302303 BRS3P32247 399 aa7.55□□□□□ -1.2
RFX3-201ENST00000302303 HILS1P60008 231 aa7.55□□□□□ -1.2
RFX3-201ENST00000302303 CATR1Q13166 79 aa7.55□□□□□ -1.2
RFX3-201ENST00000302303 LY6EQ16553 131 aa7.55□□□□□ -1.2
RFX3-201ENST00000302303 Q6ZS46 218 aa7.55□□□□□ -1.2
RFX3-201ENST00000302303 LYG2Q86SG7 212 aa7.55□□□□□ -1.2
RFX3-201ENST00000302303 SGPP2Q8IWX5 399 aa7.55□□□□□ -1.2
RFX3-201ENST00000302303 SELENOHQ8IZQ5 122 aaKnown RBP7.55□□□□□ -1.2
RFX3-201ENST00000302303 FAM71E2Q8N5Q1 922 aa7.55□□□□□ -1.2
RFX3-201ENST00000302303 LRTM2Q8N967 370 aa7.55□□□□□ -1.2
RFX3-201ENST00000302303 OR4C13Q8NGP0 309 aa7.55□□□□□ -1.2
RFX3-201ENST00000302303 OR2T10Q8NGZ9 312 aa7.55□□□□□ -1.2
RFX3-201ENST00000302303 SSMEM1Q8WWF3 244 aa7.55□□□□□ -1.2
RFX3-201ENST00000302303 FLYWCH2Q96CP2 140 aaKnown RBP7.55□□□□□ -1.2
RFX3-201ENST00000302303 RBM14Q96PK6 669 aaKnown RBP7.55□□□□□ -1.2
RFX3-201ENST00000302303 RNF5Q99942 180 aa7.55□□□□□ -1.2
RFX3-201ENST00000302303 TPSG1Q9NRR2 321 aa7.55□□□□□ -1.2
RFX3-201ENST00000302303 PRELID3BQ9Y3B1 194 aa7.55□□□□□ -1.2
RFX3-201ENST00000302303 TRAV3A0A0B4J244 114 aa7.54□□□□□ -1.2
RFX3-201ENST00000302303 C7orf66A4D0T2 115 aa7.54□□□□□ -1.2
RFX3-201ENST00000302303 DNAJC9-AS1A6NH13 148 aa7.54□□□□□ -1.2
RFX3-201ENST00000302303 DBX1A6NMT0 343 aa7.54□□□□□ -1.2
RFX3-201ENST00000302303 RNF212BA8MTL3 300 aa7.54□□□□□ -1.2
RFX3-201ENST00000302303 CLDN34H7C241 214 aa7.54□□□□□ -1.2
RFX3-201ENST00000302303 H7C2Y5 167 aa7.54□□□□□ -1.2
RFX3-201ENST00000302303 FCN1O00602 326 aa7.54□□□□□ -1.2
RFX3-201ENST00000302303 DUS4LO95620 317 aaKnown RBP7.54□□□□□ -1.2
RFX3-201ENST00000302303 HPRT1P00492 218 aa7.54□□□□□ -1.2
RFX3-201ENST00000302303 IFNA2P01563 188 aa7.54□□□□□ -1.2
RFX3-201ENST00000302303 APOA2P02652 100 aa7.54□□□□□ -1.2
RFX3-201ENST00000302303 RRASP10301 218 aa7.54□□□□□ -1.2
RFX3-201ENST00000302303 KIR2DS2P43631 304 aa7.54□□□□□ -1.2
RFX3-201ENST00000302303 TAS2R31P59538 309 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms