RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 C3orf85A0A1B0GTC6 90 aa12.17□□□□□ -0.46
UBXN1-202ENST00000301935 H0Y980 276 aa12.17□□□□□ -0.46
UBXN1-202ENST00000301935 RBFOX2O43251 390 aaKnown RBP eCLIP12.17□□□□□ -0.46
UBXN1-202ENST00000301935 PROP1O75360 226 aa12.17□□□□□ -0.46
UBXN1-202ENST00000301935 APOA2P02652 100 aa12.17□□□□□ -0.46
UBXN1-202ENST00000301935 RPA2P15927 270 aa12.17□□□□□ -0.46
UBXN1-202ENST00000301935 ANXA7P20073 488 aaKnown RBP12.17□□□□□ -0.46
UBXN1-202ENST00000301935 DLX1P56177 255 aa12.17□□□□□ -0.46
UBXN1-202ENST00000301935 RPL39P5Q59GN2 51 aa12.17□□□□□ -0.46
UBXN1-202ENST00000301935 GLDNQ6ZMI3 551 aaPredicted RBP12.17□□□□□ -0.46
UBXN1-202ENST00000301935 LYG2Q86SG7 212 aa12.17□□□□□ -0.46
UBXN1-202ENST00000301935 TMEM230Q96A57 120 aa12.17□□□□□ -0.46
UBXN1-202ENST00000301935 AIFM2Q9BRQ8 373 aa12.17□□□□□ -0.46
UBXN1-202ENST00000301935 PRDM13Q9H4Q3 707 aa12.17□□□□□ -0.46
UBXN1-202ENST00000301935 A0A1B0GUS0 222 aa12.16□□□□□ -0.46
UBXN1-202ENST00000301935 FAM181BA6NEQ2 426 aa12.16□□□□□ -0.46
UBXN1-202ENST00000301935 CREBL2O60519 120 aaPredicted RBP12.16□□□□□ -0.46
UBXN1-202ENST00000301935 ATG12O94817 140 aa12.16□□□□□ -0.46
UBXN1-202ENST00000301935 SFT2D2O95562 160 aa12.16□□□□□ -0.46
UBXN1-202ENST00000301935 DUS4LO95620 317 aaKnown RBP12.16□□□□□ -0.46
UBXN1-202ENST00000301935 SAA4P35542 130 aa12.16□□□□□ -0.46
UBXN1-202ENST00000301935 RAB13P51153 203 aa12.16□□□□□ -0.46
UBXN1-202ENST00000301935 SRSF4Q08170 494 aaKnown RBP12.16□□□□□ -0.46
UBXN1-202ENST00000301935 RTL8BQ17RB0 113 aa12.16□□□□□ -0.46
UBXN1-202ENST00000301935 DEFB112Q30KQ8 113 aa12.16□□□□□ -0.46
UBXN1-202ENST00000301935 DHRS7BQ6IAN0 325 aaPredicted RBP12.16□□□□□ -0.46
UBXN1-202ENST00000301935 BRD3OSQ6XYD6 125 aa12.16□□□□□ -0.46
UBXN1-202ENST00000301935 Q6ZNX1 250 aa12.16□□□□□ -0.46
UBXN1-202ENST00000301935 OR5AN1Q8NGI8 311 aa12.16□□□□□ -0.46
UBXN1-202ENST00000301935 TCTEX1D2Q8WW35 142 aa12.16□□□□□ -0.46
UBXN1-202ENST00000301935 ZNRD1Q9P1U0 126 aa12.16□□□□□ -0.46
UBXN1-202ENST00000301935 FAM96BQ9Y3D0 163 aa12.16□□□□□ -0.46
UBXN1-202ENST00000301935 VWFP04275 2813 aa12.16□□□□□ -0.46
UBXN1-202ENST00000301935 A0A0B4J2A0 478 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 IGHV1-3A0A0C4DH29 117 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 C9orf170A2RU37 121 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 TNFSF12O43508 249 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 HLA-AP01891 365 aaKnown RBP12.15□□□□□ -0.46
UBXN1-202ENST00000301935 SERPINE2P07093 398 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 CT45A6P0DMU7 189 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 CT45A5P0DMU8 189 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 CT45A7P0DMV0 189 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 VSIG10L2P0DP72 767 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 VAMP1P23763 118 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 CD1BP29016 333 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 BRS3P32247 399 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 RAB25P57735 213 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 PRB3Q04118 309 aaPredicted RBP12.15□□□□□ -0.46
UBXN1-202ENST00000301935 DHRS2Q13268 280 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 PPP1R1AQ13522 171 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 TATDN3Q17R31 274 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 PDZD9Q8IXQ8 264 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 OR4F5Q8NH21 305 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 OR51H1Q8NH63 302 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 COQ8AQ8NI60 647 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 ZNF431Q8TF32 576 aaPredicted RBP12.15□□□□□ -0.46
UBXN1-202ENST00000301935 IL22RA2Q969J5 263 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 ZDHHC16Q969W1 377 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 C5orf30Q96GV9 206 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 PHB2Q99623 299 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 NABP2Q9BQ15 211 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 TMEM222Q9H0R3 208 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 MEGF9Q9H1U4 602 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 BEX1Q9HBH7 125 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 SHPKQ9UHJ6 478 aa12.15□□□□□ -0.46
UBXN1-202ENST00000301935 A0A1W2PRD5 423 aa12.14□□□□□ -0.47
UBXN1-202ENST00000301935 A0A1W2PRF3 423 aa12.14□□□□□ -0.47
UBXN1-202ENST00000301935 A0A1W2PRM7 423 aa12.14□□□□□ -0.47
UBXN1-202ENST00000301935 C7orf66A4D0T2 115 aa12.14□□□□□ -0.47
UBXN1-202ENST00000301935 FBP1P09467 338 aa12.14□□□□□ -0.47
UBXN1-202ENST00000301935 UCP1P25874 307 aa12.14□□□□□ -0.47
UBXN1-202ENST00000301935 DYNLT3P51808 116 aa12.14□□□□□ -0.47
UBXN1-202ENST00000301935 SUPT4H1P63272 117 aaKnown RBP12.14□□□□□ -0.47
UBXN1-202ENST00000301935 HABP2Q14520 560 aaPredicted RBP12.14□□□□□ -0.47
UBXN1-202ENST00000301935 SSX2Q16385 188 aa12.14□□□□□ -0.47
UBXN1-202ENST00000301935 AANATQ16613 207 aa12.14□□□□□ -0.47
UBXN1-202ENST00000301935 LHFPL4Q7Z7J7 247 aa12.14□□□□□ -0.47
UBXN1-202ENST00000301935 MOB3BQ86TA1 216 aa12.14□□□□□ -0.47
UBXN1-202ENST00000301935 PDPNQ86YL7 162 aa12.14□□□□□ -0.47
UBXN1-202ENST00000301935 ZNF383Q8NA42 475 aa12.14□□□□□ -0.47
UBXN1-202ENST00000301935 OR4S2Q8NH73 311 aa12.14□□□□□ -0.47
UBXN1-202ENST00000301935 CAPSLQ8WWF8 208 aa12.14□□□□□ -0.47
UBXN1-202ENST00000301935 DDB2Q92466 427 aa12.14□□□□□ -0.47
UBXN1-202ENST00000301935 RNF5Q99942 180 aa12.14□□□□□ -0.47
UBXN1-202ENST00000301935 CITED1Q99966 193 aa12.14□□□□□ -0.47
UBXN1-202ENST00000301935 MRPL20Q9BYC9 149 aaKnown RBP12.14□□□□□ -0.47
UBXN1-202ENST00000301935 WASHC3Q9Y3C0 194 aa12.14□□□□□ -0.47
UBXN1-202ENST00000301935 HILPDAQ9Y5L2 63 aa12.14□□□□□ -0.47
UBXN1-202ENST00000301935 DUXBA0A1W2PPF3 345 aa12.13□□□□□ -0.47
UBXN1-202ENST00000301935 LINC00473A8K010 186 aa12.13□□□□□ -0.47
UBXN1-202ENST00000301935 H0YJW9 148 aa12.13□□□□□ -0.47
UBXN1-202ENST00000301935 HPRT1P00492 218 aa12.13□□□□□ -0.47
UBXN1-202ENST00000301935 OR5AC1P0C628 307 aa12.13□□□□□ -0.47
UBXN1-202ENST00000301935 RPL30P62888 115 aaKnown RBP12.13□□□□□ -0.47
UBXN1-202ENST00000301935 RELBQ01201 579 aa12.13□□□□□ -0.47
UBXN1-202ENST00000301935 TMEM187Q14656 261 aa12.13□□□□□ -0.47
UBXN1-202ENST00000301935 LIAT1Q6ZQX7 453 aa12.13□□□□□ -0.47
UBXN1-202ENST00000301935 THNSL2Q86YJ6 484 aa12.13□□□□□ -0.47
UBXN1-202ENST00000301935 SPAG16Q8N0X2 631 aa12.13□□□□□ -0.47
UBXN1-202ENST00000301935 LGI3Q8N145 548 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms