RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 TECTBQ96PL2 329 aa13.13□□□□□ -0.31
UBAP1-201ENST00000297661 FAM173AQ9BQD7 235 aa13.13□□□□□ -0.31
UBAP1-201ENST00000297661 VAMP8Q9BV40 100 aa13.13□□□□□ -0.31
UBAP1-201ENST00000297661 ERRFI1Q9UJM3 462 aaPredicted RBP13.13□□□□□ -0.31
UBAP1-201ENST00000297661 PXMP4Q9Y6I8 212 aa13.13□□□□□ -0.31
UBAP1-201ENST00000297661 TRAV24A0A0B4J272 114 aa13.13□□□□□ -0.31
UBAP1-201ENST00000297661 IGKV1D-33P01593 117 aa13.13□□□□□ -0.31
UBAP1-201ENST00000297661 IGKV1-33P01594 117 aa13.13□□□□□ -0.31
UBAP1-201ENST00000297661 IAPPP10997 89 aa13.13□□□□□ -0.31
UBAP1-201ENST00000297661 PSG2P11465 335 aa13.13□□□□□ -0.31
UBAP1-201ENST00000297661 UBE2NP61088 152 aaKnown RBP13.13□□□□□ -0.31
UBAP1-201ENST00000297661 PCSK4Q6UW60 755 aa13.13□□□□□ -0.31
UBAP1-201ENST00000297661 TMEM251Q8N6I4 163 aa13.13□□□□□ -0.31
UBAP1-201ENST00000297661 GPR146Q96CH1 333 aa13.13□□□□□ -0.31
UBAP1-201ENST00000297661 WDYHV1Q96HA8 205 aa13.13□□□□□ -0.31
UBAP1-201ENST00000297661 GTF3C1Q12789 2109 aa13.13□□□□□ -0.31
UBAP1-201ENST00000297661 IGKV3D-15A0A087WSY6 115 aa13.12□□□□□ -0.31
UBAP1-201ENST00000297661 KIAA1324LA8MWY0 1029 aaPredicted RBP13.12□□□□□ -0.31
UBAP1-201ENST00000297661 HAPLN4Q86UW8 402 aa13.12□□□□□ -0.31
UBAP1-201ENST00000297661 OR5D13Q8NGL4 314 aa13.12□□□□□ -0.31
UBAP1-201ENST00000297661 POM121L2Q96KW2 1035 aa13.12□□□□□ -0.31
UBAP1-201ENST00000297661 AURKAIP1Q9NWT8 199 aaPredicted RBP13.12□□□□□ -0.31
UBAP1-201ENST00000297661 ATP23Q9Y6H3 246 aa13.12□□□□□ -0.31
UBAP1-201ENST00000297661 GRIFINA4D1Z8 144 aa13.12□□□□□ -0.31
UBAP1-201ENST00000297661 ZNF16P17020 682 aaPredicted RBP13.12□□□□□ -0.31
UBAP1-201ENST00000297661 CDKN1AP38936 164 aa13.12□□□□□ -0.31
UBAP1-201ENST00000297661 SRSF6Q13247 344 aaKnown RBP13.12□□□□□ -0.31
UBAP1-201ENST00000297661 VN1R17PQ8TDU5 208 aa13.12□□□□□ -0.31
UBAP1-201ENST00000297661 MSL2Q9HCI7 577 aa13.12□□□□□ -0.31
UBAP1-201ENST00000297661 TUSC2O75896 110 aa13.12□□□□□ -0.31
UBAP1-201ENST00000297661 Q6ZRM9 215 aa13.12□□□□□ -0.31
UBAP1-201ENST00000297661 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.12□□□□□ -0.31
UBAP1-201ENST00000297661 Q8NFD4 153 aa13.12□□□□□ -0.31
UBAP1-201ENST00000297661 C22orf15Q8WYQ4 148 aa13.12□□□□□ -0.31
UBAP1-201ENST00000297661 WDR61Q9GZS3 305 aaKnown RBP13.12□□□□□ -0.31
UBAP1-201ENST00000297661 PPP1R3CQ9UQK1 317 aa13.12□□□□□ -0.31
UBAP1-201ENST00000297661 PPIAL4AQ9Y536 164 aa13.12□□□□□ -0.31
UBAP1-201ENST00000297661 CACNA1GO43497 2377 aa13.11□□□□□ -0.31
UBAP1-201ENST00000297661 CACNA1DQ01668 2161 aa13.11□□□□□ -0.31
UBAP1-201ENST00000297661 PPP1CBP62140 327 aa13.11□□□□□ -0.31
UBAP1-201ENST00000297661 RNPS1Q15287 305 aaKnown RBP13.11□□□□□ -0.31
UBAP1-201ENST00000297661 OR5P3Q8WZ94 311 aa13.11□□□□□ -0.31
UBAP1-201ENST00000297661 SLC35E1Q96K37 410 aa13.11□□□□□ -0.31
UBAP1-201ENST00000297661 OR4C12Q96R67 309 aa13.11□□□□□ -0.31
UBAP1-201ENST00000297661 SLC25A22Q9H936 323 aa13.11□□□□□ -0.31
UBAP1-201ENST00000297661 PSENENQ9NZ42 101 aa13.11□□□□□ -0.31
UBAP1-201ENST00000297661 B4GALT7Q9UBV7 327 aa13.11□□□□□ -0.31
UBAP1-201ENST00000297661 YLPM1P49750 1951 aaKnown RBP13.11□□□□□ -0.31
UBAP1-201ENST00000297661 KIR2DS1A0A191URI9 304 aa13.11□□□□□ -0.31
UBAP1-201ENST00000297661 C20orf202A1L168 122 aa13.11□□□□□ -0.31
UBAP1-201ENST00000297661 H0Y980 276 aa13.11□□□□□ -0.31
UBAP1-201ENST00000297661 SIRPB1O00241 398 aa13.11□□□□□ -0.31
UBAP1-201ENST00000297661 KIR2DS4P43632 304 aa13.11□□□□□ -0.31
UBAP1-201ENST00000297661 TPPP2P59282 170 aa13.11□□□□□ -0.31
UBAP1-201ENST00000297661 KIR2DS1Q14954 304 aa13.11□□□□□ -0.31
UBAP1-201ENST00000297661 ATP1A1-AS1Q5TC04 95 aa13.11□□□□□ -0.31
UBAP1-201ENST00000297661 TCF23Q7RTU1 214 aa13.11□□□□□ -0.31
UBAP1-201ENST00000297661 HSPB9Q9BQS6 159 aa13.11□□□□□ -0.31
UBAP1-201ENST00000297661 DEFB127Q9H1M4 99 aa13.11□□□□□ -0.31
UBAP1-201ENST00000297661 PATZ1Q9HBE1 687 aaKnown RBP13.11□□□□□ -0.31
UBAP1-201ENST00000297661 MAP1BP46821 2468 aaKnown RBP13.1□□□□□ -0.31
UBAP1-201ENST00000297661 DOCK11Q5JSL3 2073 aa13.1□□□□□ -0.31
UBAP1-201ENST00000297661 ADMP35318 185 aa13.1□□□□□ -0.31
UBAP1-201ENST00000297661 HBG1P69891 147 aa13.1□□□□□ -0.31
UBAP1-201ENST00000297661 HBG2P69892 147 aa13.1□□□□□ -0.31
UBAP1-201ENST00000297661 TMEM144Q7Z5S9 345 aa13.1□□□□□ -0.31
UBAP1-201ENST00000297661 MCEMP1Q8IX19 187 aa13.1□□□□□ -0.31
UBAP1-201ENST00000297661 UBE2L5PA0A1B0GUS4 154 aa13.1□□□□□ -0.31
UBAP1-201ENST00000297661 ANKRD30BLA7E2S9 258 aa13.1□□□□□ -0.31
UBAP1-201ENST00000297661 SYNGR2O43760 224 aa13.1□□□□□ -0.31
UBAP1-201ENST00000297661 VENTXO95231 258 aa13.1□□□□□ -0.31
UBAP1-201ENST00000297661 SERPINE2P07093 398 aa13.1□□□□□ -0.31
UBAP1-201ENST00000297661 CELA3BP08861 270 aa13.1□□□□□ -0.31
UBAP1-201ENST00000297661 F2RP25116 425 aa13.1□□□□□ -0.31
UBAP1-201ENST00000297661 SOX8P57073 446 aa13.1□□□□□ -0.31
UBAP1-201ENST00000297661 PLP2Q04941 152 aa13.1□□□□□ -0.31
UBAP1-201ENST00000297661 MMDQ15546 238 aa13.1□□□□□ -0.31
UBAP1-201ENST00000297661 FAM53AQ6NSI3 398 aaPredicted RBP13.1□□□□□ -0.31
UBAP1-201ENST00000297661 FAM58AQ8N1B3 248 aa13.1□□□□□ -0.31
UBAP1-201ENST00000297661 TAF15Q92804 592 aaKnown RBP eCLIP13.1□□□□□ -0.31
UBAP1-201ENST00000297661 CIB3Q96Q77 187 aaPredicted RBP13.1□□□□□ -0.31
UBAP1-201ENST00000297661 LINC00470Q9BZP3 86 aa13.1□□□□□ -0.31
UBAP1-201ENST00000297661 C1QTNF9BB2RNN3 333 aa13.09□□□□□ -0.31
UBAP1-201ENST00000297661 ZNF324BQ6AW86 544 aaPredicted RBP13.09□□□□□ -0.31
UBAP1-201ENST00000297661 OR5A2Q8NGI9 324 aa13.09□□□□□ -0.31
UBAP1-201ENST00000297661 OR1K1Q8NGR3 316 aa13.09□□□□□ -0.31
UBAP1-201ENST00000297661 GAL3ST2Q9H3Q3 398 aa13.09□□□□□ -0.31
UBAP1-201ENST00000297661 TP53TG3Q9ULZ0 132 aa13.09□□□□□ -0.31
UBAP1-201ENST00000297661 RBM7Q9Y580 266 aaKnown RBP13.09□□□□□ -0.31
UBAP1-201ENST00000297661 FAM90A10PA6NDY2 464 aa13.09□□□□□ -0.31
UBAP1-201ENST00000297661 FAM90A18PA6NE21 464 aa13.09□□□□□ -0.31
UBAP1-201ENST00000297661 FAM90A16PA6NEW6 464 aa13.09□□□□□ -0.31
UBAP1-201ENST00000297661 FAM90A20PA6NIJ5 464 aa13.09□□□□□ -0.31
UBAP1-201ENST00000297661 FAM90A8PA6NJQ4 464 aa13.09□□□□□ -0.31
UBAP1-201ENST00000297661 FAM90A7PA6NKC0 464 aa13.09□□□□□ -0.31
UBAP1-201ENST00000297661 FAM90A22PA8MWA6 464 aa13.09□□□□□ -0.31
UBAP1-201ENST00000297661 FAM90A12PA8MX19 464 aa13.09□□□□□ -0.31
UBAP1-201ENST00000297661 FAM90A5PA8MXJ8 464 aa13.09□□□□□ -0.31
UBAP1-201ENST00000297661 FAM90A23PA8MXZ1 464 aa13.09□□□□□ -0.31
UBAP1-201ENST00000297661 FAM90A15PP0C7V4 464 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms