RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 BCL6BQ8N143 479 aaPredicted RBP12.27□□□□□ -0.45
CCDC140-201ENST00000295226 DYNAPQ8N1N2 210 aa12.27□□□□□ -0.45
CCDC140-201ENST00000295226 C8orf31Q8N9H6 132 aa12.27□□□□□ -0.45
CCDC140-201ENST00000295226 NANPQ8TBE9 248 aa12.27□□□□□ -0.45
CCDC140-201ENST00000295226 TMEM230Q96A57 120 aa12.27□□□□□ -0.45
CCDC140-201ENST00000295226 AJUBAQ96IF1 538 aa12.27□□□□□ -0.45
CCDC140-201ENST00000295226 SDHAF2Q9NX18 166 aa12.27□□□□□ -0.45
CCDC140-201ENST00000295226 ITGB1BP1O14713 200 aa12.26□□□□□ -0.45
CCDC140-201ENST00000295226 HTR1DP28221 377 aa12.26□□□□□ -0.45
CCDC140-201ENST00000295226 RAB7AP51149 207 aa12.26□□□□□ -0.45
CCDC140-201ENST00000295226 AP2S1P53680 142 aaPredicted RBP12.26□□□□□ -0.45
CCDC140-201ENST00000295226 UBA52P62987 128 aaKnown RBP12.26□□□□□ -0.45
CCDC140-201ENST00000295226 ACOT7LQ6ZUV0 252 aa12.26□□□□□ -0.45
CCDC140-201ENST00000295226 KCTD9Q7L273 389 aa12.26□□□□□ -0.45
CCDC140-201ENST00000295226 KCNRGQ8N5I3 272 aa12.26□□□□□ -0.45
CCDC140-201ENST00000295226 DRAM1Q8N682 238 aa12.26□□□□□ -0.45
CCDC140-201ENST00000295226 SCARB1Q8WTV0 552 aa12.26□□□□□ -0.45
CCDC140-201ENST00000295226 PPP1R1CQ8WVI7 109 aa12.26□□□□□ -0.45
CCDC140-201ENST00000295226 ZNF251Q9BRH9 671 aa12.26□□□□□ -0.45
CCDC140-201ENST00000295226 TNFSF18Q9UNG2 199 aa12.26□□□□□ -0.45
CCDC140-201ENST00000295226 RPS10-NUDT3A0A1W2PQS6 291 aa12.26□□□□□ -0.45
CCDC140-201ENST00000295226 C5orf51A6NDU8 294 aa12.26□□□□□ -0.45
CCDC140-201ENST00000295226 LY6LH3BQJ8 138 aa12.26□□□□□ -0.45
CCDC140-201ENST00000295226 RAB29O14966 203 aa12.26□□□□□ -0.45
CCDC140-201ENST00000295226 FSHBP01225 129 aa12.26□□□□□ -0.45
CCDC140-201ENST00000295226 EPHA1P21709 976 aa12.26□□□□□ -0.45
CCDC140-201ENST00000295226 SSX2Q16385 188 aa12.26□□□□□ -0.45
CCDC140-201ENST00000295226 SGPP2Q8IWX5 399 aa12.26□□□□□ -0.45
CCDC140-201ENST00000295226 ZNF645Q8N7E2 425 aa12.26□□□□□ -0.45
CCDC140-201ENST00000295226 ST6GALNAC6Q969X2 333 aa12.26□□□□□ -0.45
CCDC140-201ENST00000295226 DPM3Q9P2X0 92 aa12.26□□□□□ -0.45
CCDC140-201ENST00000295226 HIVEP2P31629 2446 aa12.25□□□□□ -0.45
CCDC140-201ENST00000295226 A0A0U1RQK1 487 aa12.25□□□□□ -0.45
CCDC140-201ENST00000295226 KANTRA0A1W2PQU2 76 aa12.25□□□□□ -0.45
CCDC140-201ENST00000295226 FAM25EA8MYX2 175 aa12.25□□□□□ -0.45
CCDC140-201ENST00000295226 M0R1X1 148 aa12.25□□□□□ -0.45
CCDC140-201ENST00000295226 PET100P0DJ07 73 aa12.25□□□□□ -0.45
CCDC140-201ENST00000295226 PSMB6P28072 239 aa12.25□□□□□ -0.45
CCDC140-201ENST00000295226 UCP3P55916 312 aa12.25□□□□□ -0.45
CCDC140-201ENST00000295226 INO80EQ8NBZ0 244 aaPredicted RBP12.25□□□□□ -0.45
CCDC140-201ENST00000295226 RSRP1Q9BUV0 290 aa12.25□□□□□ -0.45
CCDC140-201ENST00000295226 MED9Q9NWA0 146 aa12.25□□□□□ -0.45
CCDC140-201ENST00000295226 NUP50Q9UKX7 468 aa12.25□□□□□ -0.45
CCDC140-201ENST00000295226 MTORP42345 2549 aa12.24□□□□□ -0.45
CCDC140-201ENST00000295226 MDFIC2A0A1B0GVS7 189 aa12.24□□□□□ -0.45
CCDC140-201ENST00000295226 LEUTXA8MZ59 168 aa12.24□□□□□ -0.45
CCDC140-201ENST00000295226 CFDP00746 253 aaPredicted RBP12.24□□□□□ -0.45
CCDC140-201ENST00000295226 IFNA2P01563 188 aa12.24□□□□□ -0.45
CCDC140-201ENST00000295226 SUPT4H1P63272 117 aaKnown RBP12.24□□□□□ -0.45
CCDC140-201ENST00000295226 TPTE2P1Q5T6R2 138 aa12.24□□□□□ -0.45
CCDC140-201ENST00000295226 RPEQ96AT9 228 aa12.24□□□□□ -0.45
CCDC140-201ENST00000295226 MRPL20Q9BYC9 149 aaKnown RBP12.24□□□□□ -0.45
CCDC140-201ENST00000295226 KCNIP3Q9Y2W7 256 aa12.24□□□□□ -0.45
CCDC140-201ENST00000295226 AMMECR1Q9Y4X0 333 aaPredicted RBP12.24□□□□□ -0.45
CCDC140-201ENST00000295226 IGHV3-72A0A0B4J1Y9 119 aa12.23□□□□□ -0.45
CCDC140-201ENST00000295226 CCSO14618 274 aa12.23□□□□□ -0.45
CCDC140-201ENST00000295226 SRP14P37108 136 aaKnown RBP12.23□□□□□ -0.45
CCDC140-201ENST00000295226 RPL30P62888 115 aaKnown RBP12.23□□□□□ -0.45
CCDC140-201ENST00000295226 MIDNQ504T8 468 aa12.23□□□□□ -0.45
CCDC140-201ENST00000295226 ZNF833PQ6ZTB9 187 aa12.23□□□□□ -0.45
CCDC140-201ENST00000295226 SLC38A6Q8IZM9 456 aa12.23□□□□□ -0.45
CCDC140-201ENST00000295226 RTN4IP1Q8WWV3 396 aaPredicted RBP12.23□□□□□ -0.45
CCDC140-201ENST00000295226 SEC22AQ96IW7 307 aa12.23□□□□□ -0.45
CCDC140-201ENST00000295226 C2orf50Q96LR7 162 aa12.23□□□□□ -0.45
CCDC140-201ENST00000295226 MS4A7Q9GZW8 240 aaPredicted RBP12.23□□□□□ -0.45
CCDC140-201ENST00000295226 NAV3Q8IVL0 2385 aa12.23□□□□□ -0.45
CCDC140-201ENST00000295226 LINC00473A8K010 186 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 GPR31O00270 319 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 BCL2L11O43521 198 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 PGLYRP1O75594 196 aaPredicted RBP12.22□□□□□ -0.45
CCDC140-201ENST00000295226 CT45A6P0DMU7 189 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 CT45A5P0DMU8 189 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 CT45A7P0DMV0 189 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 CD24P25063 80 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 IL3RAP26951 378 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 NUP62P37198 522 aaPredicted RBP12.22□□□□□ -0.45
CCDC140-201ENST00000295226 RAB13P51153 203 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 ZNF137PP52743 207 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 PIGPP57054 158 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 SLC9A3R2Q15599 337 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 OR2B11Q5JQS5 317 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 MINOS1Q5TGZ0 78 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 BVESQ8NE79 360 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 PHYHIPLQ96FC7 376 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 CITED4Q96RK1 184 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 S1PR3Q99500 378 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 TBL2Q9Y4P3 447 aaKnown RBP12.22□□□□□ -0.45
CCDC140-201ENST00000295226 MINOS1-NBL1R4GNA1 71 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 C13orf42A0A1B0GVH6 325 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 CRYM-AS1A6NIL9 109 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 INAFM1C9JVW0 142 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 RRASP10301 218 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 EIF4EBP1Q13541 118 aaPredicted RBP12.22□□□□□ -0.45
CCDC140-201ENST00000295226 ABCA11PQ4W5N1 156 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 MOB3BQ86TA1 216 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 TGIF2LXQ8IUE1 241 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 CCDC71LQ8N9Z2 235 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 OR51H1Q8NH63 302 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 GALNT14Q96FL9 552 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 SLC2A9Q9NRM0 540 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms