RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 ZNF114Q8NC26 417 aa12.36□□□□□ -0.43
CCNF-201ENST00000293968 TMEM45BQ96B21 275 aa12.36□□□□□ -0.43
CCNF-201ENST00000293968 WDYHV1Q96HA8 205 aa12.36□□□□□ -0.43
CCNF-201ENST00000293968 ZDBF2Q9HCK1 2354 aa12.36□□□□□ -0.43
CCNF-201ENST00000293968 C12orf77C9JDV5 145 aa12.36□□□□□ -0.43
CCNF-201ENST00000293968 CYC1P08574 325 aa12.36□□□□□ -0.43
CCNF-201ENST00000293968 NPPCP23582 126 aa12.36□□□□□ -0.43
CCNF-201ENST00000293968 UBE2NP61088 152 aaKnown RBP12.36□□□□□ -0.43
CCNF-201ENST00000293968 TBC1D28Q2M2D7 210 aa12.36□□□□□ -0.43
CCNF-201ENST00000293968 PRAMEF5Q5TYX0 476 aa12.36□□□□□ -0.43
CCNF-201ENST00000293968 PRAMEF6Q5VXH4 476 aa12.36□□□□□ -0.43
CCNF-201ENST00000293968 LINC01551Q86U37 167 aa12.36□□□□□ -0.43
CCNF-201ENST00000293968 VKORC1L1Q8N0U8 176 aa12.36□□□□□ -0.43
CCNF-201ENST00000293968 HSPB7Q9UBY9 170 aa12.36□□□□□ -0.43
CCNF-201ENST00000293968 SSTR5P35346 364 aa12.35□□□□□ -0.43
CCNF-201ENST00000293968 MAFAQ8NHW3 353 aaPredicted RBP12.35□□□□□ -0.43
CCNF-201ENST00000293968 CIB3Q96Q77 187 aaPredicted RBP12.35□□□□□ -0.43
CCNF-201ENST00000293968 FAM173AQ9BQD7 235 aa12.35□□□□□ -0.43
CCNF-201ENST00000293968 HIPK2Q9H2X6 1198 aa12.35□□□□□ -0.43
CCNF-201ENST00000293968 TRIOBPQ9H2D6 2365 aa12.35□□□□□ -0.43
CCNF-201ENST00000293968 FAM90A26D6RGX4 464 aa12.35□□□□□ -0.43
CCNF-201ENST00000293968 FCGR3BO75015 233 aa12.35□□□□□ -0.43
CCNF-201ENST00000293968 GGCTO75223 188 aaKnown RBP12.35□□□□□ -0.43
CCNF-201ENST00000293968 OR1C1Q15619 314 aa12.35□□□□□ -0.43
CCNF-201ENST00000293968 NANOS1Q8WY41 292 aaKnown RBP12.35□□□□□ -0.43
CCNF-201ENST00000293968 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.35□□□□□ -0.43
CCNF-201ENST00000293968 SLC17A3O00476 420 aa12.35□□□□□ -0.43
CCNF-201ENST00000293968 PSPNO60542 156 aa12.35□□□□□ -0.43
CCNF-201ENST00000293968 CD1BP29016 333 aa12.35□□□□□ -0.43
CCNF-201ENST00000293968 OR10J1P30954 320 aa12.35□□□□□ -0.43
CCNF-201ENST00000293968 LHX2P50458 406 aa12.35□□□□□ -0.43
CCNF-201ENST00000293968 ERVFC1-1P60608 527 aa12.35□□□□□ -0.43
CCNF-201ENST00000293968 MIC13Q5XKP0 118 aa12.35□□□□□ -0.43
CCNF-201ENST00000293968 C6orf15Q6UXA7 325 aaPredicted RBP12.35□□□□□ -0.43
CCNF-201ENST00000293968 VN1R17PQ8TDU5 208 aa12.35□□□□□ -0.43
CCNF-201ENST00000293968 QTRT1Q9BXR0 403 aaKnown RBP12.35□□□□□ -0.43
CCNF-201ENST00000293968 PKIBQ9C010 78 aa12.35□□□□□ -0.43
CCNF-201ENST00000293968 ARL14EPLP0DKL9 152 aa12.34□□□□□ -0.43
CCNF-201ENST00000293968 ADMP35318 185 aa12.34□□□□□ -0.43
CCNF-201ENST00000293968 DUSP3P51452 185 aaPredicted RBP12.34□□□□□ -0.43
CCNF-201ENST00000293968 ARG2P78540 354 aa12.34□□□□□ -0.43
CCNF-201ENST00000293968 MRPL49Q13405 166 aaKnown RBP12.34□□□□□ -0.43
CCNF-201ENST00000293968 OR4A16Q8NH70 328 aa12.34□□□□□ -0.43
CCNF-201ENST00000293968 GNG12Q9UBI6 72 aa12.34□□□□□ -0.43
CCNF-201ENST00000293968 POLR3KQ9Y2Y1 108 aaPredicted RBP12.34□□□□□ -0.43
CCNF-201ENST00000293968 SVILO95425 2214 aa12.34□□□□□ -0.43
CCNF-201ENST00000293968 GTF3C1Q12789 2109 aa12.34□□□□□ -0.43
CCNF-201ENST00000293968 PRRC2CQ9Y520 2896 aaKnown RBP12.34□□□□□ -0.43
CCNF-201ENST00000293968 TRBV6-6A0A0A6YYG2 114 aa12.34□□□□□ -0.43
CCNF-201ENST00000293968 CLDN18P56856 261 aa12.34□□□□□ -0.43
CCNF-201ENST00000293968 WDR86Q86TI4 376 aa12.34□□□□□ -0.43
CCNF-201ENST00000293968 MED12LQ86YW9 2145 aa12.34□□□□□ -0.43
CCNF-201ENST00000293968 DCTN5Q9BTE1 182 aa12.34□□□□□ -0.43
CCNF-201ENST00000293968 BEND2Q8NDZ0 799 aa12.34□□□□□ -0.43
CCNF-201ENST00000293968 SFRP2Q96HF1 295 aa12.34□□□□□ -0.43
CCNF-201ENST00000293968 HSPB9Q9BQS6 159 aa12.34□□□□□ -0.43
CCNF-201ENST00000293968 ABI3Q9P2A4 366 aa12.34□□□□□ -0.43
CCNF-201ENST00000293968 LOXL2Q9Y4K0 774 aa12.34□□□□□ -0.43
CCNF-201ENST00000293968 MAP1BP46821 2468 aaKnown RBP12.34□□□□□ -0.43
CCNF-201ENST00000293968 SCO2A0A1W2PP80 73 aa12.33□□□□□ -0.43
CCNF-201ENST00000293968 IGHEP01854 428 aa12.33□□□□□ -0.43
CCNF-201ENST00000293968 GCNT2Q8N0V5 402 aa12.33□□□□□ -0.43
CCNF-201ENST00000293968 OR10G8Q8NGN5 311 aa12.33□□□□□ -0.43
CCNF-201ENST00000293968 TTTY12Q9BZ98 90 aa12.33□□□□□ -0.43
CCNF-201ENST00000293968 LINC00470Q9BZP3 86 aa12.33□□□□□ -0.43
CCNF-201ENST00000293968 PDE6DO43924 150 aa12.33□□□□□ -0.44
CCNF-201ENST00000293968 LYZL6O75951 148 aa12.33□□□□□ -0.44
CCNF-201ENST00000293968 ACTL6BO94805 426 aa12.33□□□□□ -0.44
CCNF-201ENST00000293968 VENTXO95231 258 aa12.33□□□□□ -0.44
CCNF-201ENST00000293968 CD82P27701 267 aa12.33□□□□□ -0.44
CCNF-201ENST00000293968 KRTDAPP60985 99 aa12.33□□□□□ -0.44
CCNF-201ENST00000293968 SLC35B1P78383 322 aa12.33□□□□□ -0.44
CCNF-201ENST00000293968 SLC25A40Q8TBP6 338 aa12.33□□□□□ -0.44
CCNF-201ENST00000293968 R3HDM4Q96D70 268 aa12.33□□□□□ -0.44
CCNF-201ENST00000293968 FCN1O00602 326 aa12.33□□□□□ -0.44
CCNF-201ENST00000293968 COX5BP10606 129 aa12.33□□□□□ -0.44
CCNF-201ENST00000293968 HTD2P86397 168 aa12.33□□□□□ -0.44
CCNF-201ENST00000293968 STRADBQ9C0K7 418 aa12.33□□□□□ -0.44
CCNF-201ENST00000293968 ZNF703Q9H7S9 590 aaPredicted RBP12.33□□□□□ -0.44
CCNF-201ENST00000293968 FRYQ5TBA9 3013 aa12.33□□□□□ -0.44
CCNF-201ENST00000293968 MARCH11A6NNE9 402 aa12.33□□□□□ -0.44
CCNF-201ENST00000293968 CRISP2P16562 243 aa12.33□□□□□ -0.44
CCNF-201ENST00000293968 IER3P46695 156 aa12.33□□□□□ -0.44
CCNF-201ENST00000293968 ACSF3Q4G176 576 aaPredicted RBP12.33□□□□□ -0.44
CCNF-201ENST00000293968 COA6Q5JTJ3 125 aaKnown RBP12.33□□□□□ -0.44
CCNF-201ENST00000293968 Q8IYB0 196 aa12.33□□□□□ -0.44
CCNF-201ENST00000293968 HPRT1P00492 218 aa12.32□□□□□ -0.44
CCNF-201ENST00000293968 TPPP2P59282 170 aa12.32□□□□□ -0.44
CCNF-201ENST00000293968 NRN1LQ496H8 165 aa12.32□□□□□ -0.44
CCNF-201ENST00000293968 TMEM251Q8N6I4 163 aa12.32□□□□□ -0.44
CCNF-201ENST00000293968 GCM1Q9NP62 436 aa12.32□□□□□ -0.44
CCNF-201ENST00000293968 RBFOX2O43251 390 aaKnown RBP eCLIP12.32□□□□□ -0.44
CCNF-201ENST00000293968 NEURL1O76050 574 aa12.32□□□□□ -0.44
CCNF-201ENST00000293968 LCN2P80188 198 aa12.32□□□□□ -0.44
CCNF-201ENST00000293968 TIPARPQ7Z3E1 657 aaKnown RBP12.32□□□□□ -0.44
CCNF-201ENST00000293968 AQP7O14520 342 aa12.32□□□□□ -0.44
CCNF-201ENST00000293968 GPR12P47775 334 aa12.32□□□□□ -0.44
CCNF-201ENST00000293968 DBX2Q6ZNG2 339 aa12.32□□□□□ -0.44
CCNF-201ENST00000293968 PILRBQ9UKJ0 227 aa12.32□□□□□ -0.44
CCNF-201ENST00000293968 FABP6P51161 128 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms