RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 RBFOX2O43251 390 aaKnown RBP eCLIP16.54■□□□□ 0.24
CXCL16-201ENST00000293778 OR2B8PP59922 312 aa16.54■□□□□ 0.24
CXCL16-201ENST00000293778 RAB5BP61020 215 aa16.54■□□□□ 0.24
CXCL16-201ENST00000293778 RPS16P62249 146 aaKnown RBP16.54■□□□□ 0.24
CXCL16-201ENST00000293778 HNF4GQ14541 408 aa16.54■□□□□ 0.24
CXCL16-201ENST00000293778 PRAMEF5Q5TYX0 476 aa16.54■□□□□ 0.24
CXCL16-201ENST00000293778 DUX4L9Q6RFH8 374 aaPredicted RBP16.54■□□□□ 0.24
CXCL16-201ENST00000293778 DEFB108BQ8NET1 73 aa16.54■□□□□ 0.24
CXCL16-201ENST00000293778 OR10G4Q8NGN3 311 aa16.54■□□□□ 0.24
CXCL16-201ENST00000293778 CISD1Q9NZ45 108 aaKnown RBP16.54■□□□□ 0.24
CXCL16-201ENST00000293778 MAP1LC3B2A6NCE7 125 aa16.53■□□□□ 0.24
CXCL16-201ENST00000293778 FAM90A9PA6NNJ1 464 aa16.53■□□□□ 0.24
CXCL16-201ENST00000293778 SLC31A2O15432 143 aa16.53■□□□□ 0.24
CXCL16-201ENST00000293778 PTAFRP25105 342 aa16.53■□□□□ 0.24
CXCL16-201ENST00000293778 SSX9Q7RTT3 188 aa16.53■□□□□ 0.24
CXCL16-201ENST00000293778 MAP1LC3BQ9GZQ8 125 aa16.53■□□□□ 0.24
CXCL16-201ENST00000293778 KBTBD11-OT1A0A1B0GTJ5 212 aa16.53■□□□□ 0.24
CXCL16-201ENST00000293778 IFNA17P01571 189 aa16.53■□□□□ 0.24
CXCL16-201ENST00000293778 FGF7P21781 194 aa16.53■□□□□ 0.24
CXCL16-201ENST00000293778 RAB7AP51149 207 aa16.53■□□□□ 0.24
CXCL16-201ENST00000293778 HABP2Q14520 560 aaPredicted RBP16.53■□□□□ 0.24
CXCL16-201ENST00000293778 AARDQ4LEZ3 155 aa16.53■□□□□ 0.24
CXCL16-201ENST00000293778 WFDC8Q8IUA0 241 aa16.53■□□□□ 0.24
CXCL16-201ENST00000293778 Q8TCH9 128 aa16.53■□□□□ 0.24
CXCL16-201ENST00000293778 LEAP2Q969E1 77 aa16.53■□□□□ 0.24
CXCL16-201ENST00000293778 GAFA1Q96PS6 74 aa16.53■□□□□ 0.24
CXCL16-201ENST00000293778 S1PR3Q99500 378 aa16.53■□□□□ 0.24
CXCL16-201ENST00000293778 NIPSNAP3BQ9BS92 247 aa16.53■□□□□ 0.24
CXCL16-201ENST00000293778 GFOD1Q9NXC2 390 aa16.53■□□□□ 0.24
CXCL16-201ENST00000293778 ELOVL5Q9NYP7 299 aa16.53■□□□□ 0.24
CXCL16-201ENST00000293778 TRGV10A0A0A0MS01 117 aa16.52■□□□□ 0.24
CXCL16-201ENST00000293778 C1orf196B1AJZ1 125 aa16.52■□□□□ 0.24
CXCL16-201ENST00000293778 ITGB1BP1O14713 200 aa16.52■□□□□ 0.24
CXCL16-201ENST00000293778 ERVK-16P61578 105 aa16.52■□□□□ 0.24
CXCL16-201ENST00000293778 UTF1Q5T230 341 aa16.52■□□□□ 0.24
CXCL16-201ENST00000293778 ACSM6Q6P461 480 aa16.52■□□□□ 0.24
CXCL16-201ENST00000293778 FAM24BQ8N5W8 94 aa16.52■□□□□ 0.24
CXCL16-201ENST00000293778 OR4A16Q8NH70 328 aa16.52■□□□□ 0.24
CXCL16-201ENST00000293778 SLC39A9Q9NUM3 307 aa16.52■□□□□ 0.24
CXCL16-201ENST00000293778 CEP250Q9BV73 2442 aa16.52■□□□□ 0.24
CXCL16-201ENST00000293778 MGAQ8IWI9 3026 aa16.52■□□□□ 0.23
CXCL16-201ENST00000293778 GVINP1Q7Z2Y8 2422 aa16.52■□□□□ 0.23
CXCL16-201ENST00000293778 IGKV1D-33P01593 117 aa16.51■□□□□ 0.23
CXCL16-201ENST00000293778 IGKV1-33P01594 117 aa16.51■□□□□ 0.23
CXCL16-201ENST00000293778 KIR2DS2P43631 304 aa16.51■□□□□ 0.23
CXCL16-201ENST00000293778 GNB2P62879 340 aa16.51■□□□□ 0.23
CXCL16-201ENST00000293778 RPP25LQ8N5L8 163 aaKnown RBP16.51■□□□□ 0.23
CXCL16-201ENST00000293778 Q8NA96 180 aa16.51■□□□□ 0.23
CXCL16-201ENST00000293778 TVP23CQ96ET8 276 aa16.51■□□□□ 0.23
CXCL16-201ENST00000293778 CCL13Q99616 98 aa16.51■□□□□ 0.23
CXCL16-201ENST00000293778 OR2C1O95371 312 aa16.51■□□□□ 0.23
CXCL16-201ENST00000293778 IRF2P14316 349 aa16.51■□□□□ 0.23
CXCL16-201ENST00000293778 RAB5AP20339 215 aa16.51■□□□□ 0.23
CXCL16-201ENST00000293778 TAGLN2P37802 199 aaKnown RBP16.51■□□□□ 0.23
CXCL16-201ENST00000293778 RAB11AP62491 216 aa16.51■□□□□ 0.23
CXCL16-201ENST00000293778 TFF3Q07654 80 aa16.51■□□□□ 0.23
CXCL16-201ENST00000293778 VWC2Q2TAL6 325 aa16.51■□□□□ 0.23
CXCL16-201ENST00000293778 GFRALQ6UXV0 394 aa16.51■□□□□ 0.23
CXCL16-201ENST00000293778 SH3BGRL2Q9UJC5 107 aa16.51■□□□□ 0.23
CXCL16-201ENST00000293778 GAB2Q9UQC2 676 aa16.51■□□□□ 0.23
CXCL16-201ENST00000293778 A0A1W2PPE3 182 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 C15orf62A8K5M9 175 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 GYPAP02724 150 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 DLK1P80370 383 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 CT45A1Q5HYN5 189 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 ASCL5Q7RTU5 278 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 VKORC1L1Q8N0U8 176 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 CT45A3Q8NHU0 189 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 LHX4Q969G2 390 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 LRFN3Q9BTN0 628 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 DSCAMO60469 2012 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 hCG_1809904A0A1W2PP81 198 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 A0A1W2PR64 198 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 A0A1W2PRV1 198 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 LY86O95711 162 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 IFNA1P01562 189 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 NQO2P16083 231 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 SPCS3P61009 180 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 ZNF788Q6ZQV5 615 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 C1orf229Q6ZS94 237 aaPredicted RBP16.5■□□□□ 0.23
CXCL16-201ENST00000293778 SLC35E3Q7Z769 313 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 LURAP1LQ8IV03 231 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 FAM216BQ8N7L0 139 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 DDB2Q92466 427 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 SSUH2Q9Y2M2 353 aa16.5■□□□□ 0.23
CXCL16-201ENST00000293778 LAMA5O15230 3695 aa16.49■□□□□ 0.23
CXCL16-201ENST00000293778 MUC6Q6W4X9 2439 aa16.49■□□□□ 0.23
CXCL16-201ENST00000293778 EIF3GO75821 320 aaKnown RBP eCLIP16.49■□□□□ 0.23
CXCL16-201ENST00000293778 MBP02144 154 aa16.49■□□□□ 0.23
CXCL16-201ENST00000293778 TGIF2LYQ8IUE0 185 aa16.49■□□□□ 0.23
CXCL16-201ENST00000293778 ZNF709Q8N972 641 aa16.49■□□□□ 0.23
CXCL16-201ENST00000293778 NPCDR1Q9BY65 106 aa16.49■□□□□ 0.23
CXCL16-201ENST00000293778 VAX2Q9UIW0 290 aa16.49■□□□□ 0.23
CXCL16-201ENST00000293778 SAA2-SAA4A0A096LPE2 208 aa16.49■□□□□ 0.23
CXCL16-201ENST00000293778 DPRXA6NFQ7 191 aa16.49■□□□□ 0.23
CXCL16-201ENST00000293778 SAA2P0DJI9 122 aaPredicted RBP16.49■□□□□ 0.23
CXCL16-201ENST00000293778 FOXC1Q12948 553 aa16.49■□□□□ 0.23
CXCL16-201ENST00000293778 FFAR4Q5NUL3 377 aa16.49■□□□□ 0.23
CXCL16-201ENST00000293778 FAM90A2PQ658T7 463 aa16.49■□□□□ 0.23
CXCL16-201ENST00000293778 TCF23Q7RTU1 214 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms