RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 PACRGQ96M98 296 aaPredicted RBP13.38□□□□□ -0.27
SMAD6-201ENST00000288840 SAMD10Q9BYL1 202 aa13.38□□□□□ -0.27
SMAD6-201ENST00000288840 C5orf52A6NGY3 159 aa13.37□□□□□ -0.27
SMAD6-201ENST00000288840 KLK10O43240 276 aa13.37□□□□□ -0.27
SMAD6-201ENST00000288840 CD59P13987 128 aa13.37□□□□□ -0.27
SMAD6-201ENST00000288840 PAX9P55771 341 aa13.37□□□□□ -0.27
SMAD6-201ENST00000288840 ZNF90Q03938 601 aa13.37□□□□□ -0.27
SMAD6-201ENST00000288840 PMS2P11Q13670 270 aa13.37□□□□□ -0.27
SMAD6-201ENST00000288840 ZNF506Q5JVG8 444 aa13.37□□□□□ -0.27
SMAD6-201ENST00000288840 COLCA1Q6ZS62 124 aa13.37□□□□□ -0.27
SMAD6-201ENST00000288840 OR10A7Q8NGE5 316 aa13.37□□□□□ -0.27
SMAD6-201ENST00000288840 NAT8Q9UHE5 227 aa13.37□□□□□ -0.27
SMAD6-201ENST00000288840 TMPRSS2O15393 492 aa13.37□□□□□ -0.27
SMAD6-201ENST00000288840 INO80CQ6PI98 192 aaPredicted RBP13.37□□□□□ -0.27
SMAD6-201ENST00000288840 C9orf106Q8NAJ2 232 aa13.37□□□□□ -0.27
SMAD6-201ENST00000288840 NEIL1Q96FI4 390 aaPredicted RBP13.37□□□□□ -0.27
SMAD6-201ENST00000288840 PARLQ9H300 379 aa13.37□□□□□ -0.27
SMAD6-201ENST00000288840 DECR2Q9NUI1 292 aa13.37□□□□□ -0.27
SMAD6-201ENST00000288840 LRRC30A6NM36 301 aa13.36□□□□□ -0.27
SMAD6-201ENST00000288840 F6UZH7 168 aa13.36□□□□□ -0.27
SMAD6-201ENST00000288840 TNFSF4P23510 183 aa13.36□□□□□ -0.27
SMAD6-201ENST00000288840 ELOBQ15370 118 aa13.36□□□□□ -0.27
SMAD6-201ENST00000288840 WDR86Q86TI4 376 aa13.36□□□□□ -0.27
SMAD6-201ENST00000288840 LINC00596Q86U02 117 aa13.36□□□□□ -0.27
SMAD6-201ENST00000288840 CCL17Q92583 94 aa13.36□□□□□ -0.27
SMAD6-201ENST00000288840 GTF3AQ92664 365 aaKnown RBP13.36□□□□□ -0.27
SMAD6-201ENST00000288840 ZNF71Q9NQZ8 489 aaPredicted RBP13.36□□□□□ -0.27
SMAD6-201ENST00000288840 WIPI2Q9Y4P8 454 aa13.36□□□□□ -0.27
SMAD6-201ENST00000288840 IGKV1-39P01597 117 aa13.36□□□□□ -0.27
SMAD6-201ENST00000288840 MBP02144 154 aa13.36□□□□□ -0.27
SMAD6-201ENST00000288840 IGKV1D-39P04432 117 aa13.36□□□□□ -0.27
SMAD6-201ENST00000288840 TCL1AP56279 114 aa13.36□□□□□ -0.27
SMAD6-201ENST00000288840 SERF2P84101 59 aa13.36□□□□□ -0.27
SMAD6-201ENST00000288840 ARL6IP6Q8N6S5 226 aa13.36□□□□□ -0.27
SMAD6-201ENST00000288840 ITLN1Q8WWA0 313 aa13.36□□□□□ -0.27
SMAD6-201ENST00000288840 HSD17B10Q99714 261 aaKnown RBP13.36□□□□□ -0.27
SMAD6-201ENST00000288840 GYPAP02724 150 aa13.36□□□□□ -0.27
SMAD6-201ENST00000288840 CD1BP29016 333 aa13.36□□□□□ -0.27
SMAD6-201ENST00000288840 TNFSF10P50591 281 aa13.36□□□□□ -0.27
SMAD6-201ENST00000288840 CCL13Q99616 98 aa13.36□□□□□ -0.27
SMAD6-201ENST00000288840 ELOVL1Q9BW60 279 aa13.36□□□□□ -0.27
SMAD6-201ENST00000288840 METTL1Q9UBP6 276 aaKnown RBP13.36□□□□□ -0.27
SMAD6-201ENST00000288840 CTXND1A0A1B0GTU2 59 aa13.35□□□□□ -0.27
SMAD6-201ENST00000288840 C1QTNF9BB2RNN3 333 aa13.35□□□□□ -0.27
SMAD6-201ENST00000288840 SEC14L6B5MCN3 397 aa13.35□□□□□ -0.27
SMAD6-201ENST00000288840 NDUFA2O43678 99 aa13.35□□□□□ -0.27
SMAD6-201ENST00000288840 C10orf91Q5T1B1 145 aa13.35□□□□□ -0.27
SMAD6-201ENST00000288840 ZNF497Q6ZNH5 498 aa13.35□□□□□ -0.27
SMAD6-201ENST00000288840 BHLHA15Q7RTS1 189 aaPredicted RBP13.35□□□□□ -0.27
SMAD6-201ENST00000288840 RPP25LQ8N5L8 163 aaKnown RBP13.35□□□□□ -0.27
SMAD6-201ENST00000288840 POM121Q96HA1 1249 aa13.35□□□□□ -0.27
SMAD6-201ENST00000288840 FAM103A1Q9BTL3 118 aaKnown RBP13.35□□□□□ -0.27
SMAD6-201ENST00000288840 CXorf65A6NEN9 183 aa13.35□□□□□ -0.27
SMAD6-201ENST00000288840 KLF3P57682 345 aaPredicted RBP13.35□□□□□ -0.27
SMAD6-201ENST00000288840 LRRC75BQ2VPJ9 315 aa13.35□□□□□ -0.27
SMAD6-201ENST00000288840 ZNF585BQ52M93 769 aa13.35□□□□□ -0.27
SMAD6-201ENST00000288840 ETFRF1Q6IPR1 90 aa13.35□□□□□ -0.27
SMAD6-201ENST00000288840 ACSM6Q6P461 480 aa13.35□□□□□ -0.27
SMAD6-201ENST00000288840 BAGE3Q86Y29 109 aa13.35□□□□□ -0.27
SMAD6-201ENST00000288840 BAGE2Q86Y30 109 aa13.35□□□□□ -0.27
SMAD6-201ENST00000288840 DYNLRB1Q9NP97 96 aa13.35□□□□□ -0.27
SMAD6-201ENST00000288840 NDUFS6O75380 124 aaKnown RBP13.35□□□□□ -0.27
SMAD6-201ENST00000288840 CYB5R3P00387 301 aaPredicted RBP13.35□□□□□ -0.27
SMAD6-201ENST00000288840 MZT1Q08AG7 82 aa13.35□□□□□ -0.27
SMAD6-201ENST00000288840 HEPN1Q6WQI6 88 aa13.35□□□□□ -0.27
SMAD6-201ENST00000288840 OR4P4Q8NGL7 312 aa13.35□□□□□ -0.27
SMAD6-201ENST00000288840 OR2T10Q8NGZ9 312 aa13.35□□□□□ -0.27
SMAD6-201ENST00000288840 MEGF10Q96KG7 1140 aa13.35□□□□□ -0.27
SMAD6-201ENST00000288840 UHRF2Q96PU4 802 aa13.35□□□□□ -0.27
SMAD6-201ENST00000288840 SPG11Q96JI7 2443 aa13.34□□□□□ -0.27
SMAD6-201ENST00000288840 HIST1H2BKO60814 126 aa13.34□□□□□ -0.27
SMAD6-201ENST00000288840 TOX4O94842 621 aa13.34□□□□□ -0.27
SMAD6-201ENST00000288840 HIST1H2BJP06899 126 aa13.34□□□□□ -0.27
SMAD6-201ENST00000288840 HIST1H2BOP23527 126 aa13.34□□□□□ -0.27
SMAD6-201ENST00000288840 HIST1H2BBP33778 126 aa13.34□□□□□ -0.27
SMAD6-201ENST00000288840 HIST1H2BDP58876 126 aa13.34□□□□□ -0.27
SMAD6-201ENST00000288840 HIST1H2BCP62807 126 aa13.34□□□□□ -0.27
SMAD6-201ENST00000288840 PRB3Q04118 309 aaPredicted RBP13.34□□□□□ -0.27
SMAD6-201ENST00000288840 PNRC1Q12796 327 aaPredicted RBP13.34□□□□□ -0.27
SMAD6-201ENST00000288840 HIST2H2BEQ16778 126 aa13.34□□□□□ -0.27
SMAD6-201ENST00000288840 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.34□□□□□ -0.27
SMAD6-201ENST00000288840 PRR27Q6MZM9 219 aa13.34□□□□□ -0.27
SMAD6-201ENST00000288840 HIST1H2BHQ93079 126 aa13.34□□□□□ -0.27
SMAD6-201ENST00000288840 IL22RA2Q969J5 263 aa13.34□□□□□ -0.27
SMAD6-201ENST00000288840 LSM10Q969L4 123 aaKnown RBP13.34□□□□□ -0.27
SMAD6-201ENST00000288840 HIST1H2BNQ99877 126 aa13.34□□□□□ -0.27
SMAD6-201ENST00000288840 HIST1H2BMQ99879 126 aa13.34□□□□□ -0.27
SMAD6-201ENST00000288840 A0A1W2PNU3 283 aaPredicted RBP13.34□□□□□ -0.27
SMAD6-201ENST00000288840 MT-CO2P00403 227 aa13.34□□□□□ -0.27
SMAD6-201ENST00000288840 HOXA6P31267 233 aa13.34□□□□□ -0.27
SMAD6-201ENST00000288840 MRPS11P82912 194 aaKnown RBP13.34□□□□□ -0.27
SMAD6-201ENST00000288840 TRAPPC1Q9Y5R8 145 aa13.34□□□□□ -0.27
SMAD6-201ENST00000288840 TRGV10A0A0A0MS01 117 aa13.34□□□□□ -0.27
SMAD6-201ENST00000288840 TNFAIP6P98066 277 aaPredicted RBP13.34□□□□□ -0.27
SMAD6-201ENST00000288840 Q6P435 159 aa13.34□□□□□ -0.27
SMAD6-201ENST00000288840 Q6ZT83 130 aa13.34□□□□□ -0.27
SMAD6-201ENST00000288840 ZDHHC11Q9H8X9 412 aa13.34□□□□□ -0.27
SMAD6-201ENST00000288840 WDFY3Q8IZQ1 3526 aa13.33□□□□□ -0.27
SMAD6-201ENST00000288840 AGAP20933 346 aa13.33□□□□□ -0.27
SMAD6-201ENST00000288840 GABRA6Q16445 453 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms