RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 FAM78AQ5JUQ0 283 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 RHBDD2Q6NTF9 364 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 MGST2Q99735 147 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 WDR54Q9H977 334 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 B3GALT4O96024 378 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 S100A7L2Q5SY68 101 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 APOBEC4Q8WW27 367 aaKnown RBP7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 TRAV34A0A0B4J273 112 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 A0A1W2PPC1 479 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 F8VVB4 439 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 F8VWA3 439 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 NXPH1P58417 271 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 ECSCRQ19T08 205 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 SNAI3Q3KNW1 292 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 C16orf82Q7Z2V1 217 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 PRKNO60260 465 aaPredicted RBP7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 ICOSLGO75144 302 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 CEACAM6P40199 344 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 INSM1Q01101 510 aaPredicted RBP7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 SLC25A34Q6PIV7 304 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 MS4A3Q96HJ5 214 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 CST9LQ9H4G1 147 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 FGF22Q9HCT0 170 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 PCNX3Q9H6A9 2034 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 IGKV3D-11A0A0A0MRZ8 115 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 IGKV3OR2-268A0A0C4DH90 116 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 IFNL4K9M1U5 179 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 SLC17A3O00476 420 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 FGF16O43320 207 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 IGKV3-11P04433 115 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 LRRC29Q8WV35 223 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 GSN-AS1Q9NRJ2 163 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 CTLA4P16410 223 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 DMRTA1Q5VZB9 504 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 FRRS1LQ9P0K9 344 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 LINC00587B1AMM8 73 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 GGTLC3B5MD39 225 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 APCSP02743 223 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 RASL11AQ6T310 242 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 WDFY1Q8IWB7 410 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 LRTM2Q8N967 370 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 AICDAQ9GZX7 198 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 TLNRD1Q9H1K6 362 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 TRBV24-1A0A075B6N3 115 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 EIF3GO75821 320 aaKnown RBP eCLIP7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 ZNRF1Q8ND25 227 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 ASB10Q8WXI3 467 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 TM4SF19Q96DZ7 209 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 MYEOVQ96EZ4 313 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 SDHCQ99643 169 aaPredicted RBP7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 RNF122Q9H9V4 155 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 TNFRSF18Q9Y5U5 241 aa7.32□□□□□ -1.24
CACNA1D-201ENST00000288139 SRSF4Q08170 494 aaKnown RBP7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 ZNF56Q15929 161 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 MS4A4AQ96JQ5 239 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 MRPL16Q9NX20 251 aaKnown RBP7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 A0A096LPE4 126 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 A0A1W2PPZ6 126 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 C1orf53Q5VUE5 145 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 RSPO2Q6UXX9 243 aaPredicted RBP7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 THSD4Q6ZMP0 1018 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 ZNF818PQ6ZRF7 136 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 OR1L8Q8NGR8 309 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 TRAV8-7A0A075B6U6 113 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 KBTBD11-OT1A0A1B0GTJ5 212 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 TCRBV16S1A1N1A0A5B0 115 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 POM121BA6NF01 834 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 FAM90A9PA6NNJ1 464 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 PNLIPP16233 465 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 RCC1P18754 421 aaPredicted RBP7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 RBMY1FQ15415 496 aaKnown RBP7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 FAAP20Q6NZ36 180 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 SLC25A2Q9BXI2 301 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 MRPL20Q9BYC9 149 aaKnown RBP7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 MMP17Q9ULZ9 603 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 TANC1Q9C0D5 1861 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 EFNB1P98172 346 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 EWSR1Q01844 656 aaKnown RBP eCLIP7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 FAM27BQ5VT28 67 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 C10orf113Q5VZT2 155 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 HIST1H2BAQ96A08 127 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 CSN3P07498 182 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 ERVK11-1P61568 191 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 ACER2Q5QJU3 275 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 LHFPL4Q7Z7J7 247 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 CADM4Q8NFZ8 388 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 ABHD14AQ9BUJ0 271 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 TBC1D29Q9UFV1 150 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 J3KRW8 73 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 FCGR3BO75015 233 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 ARSAP15289 507 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 MRPL32Q9BYC8 188 aaKnown RBP7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 PLSCR2Q9NRY7 297 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 CST7O76096 145 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 AKR7A3O95154 331 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 CEACAM5P06731 702 aa7.31□□□□□ -1.24
CACNA1D-201ENST00000288139 PLXNA4Q9HCM2 1894 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 MARCH3Q86UD3 253 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 FDCSPQ8NFU4 85 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 CLDN16Q9Y5I7 305 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms