RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 PARLQ9H300 379 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 SLC35D1Q9NTN3 355 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 FAM157AC9JC47 383 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 LMO1P25800 156 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 CASP6P55212 293 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 B2MP61769 119 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 TLE1Q04724 770 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 RNFT1Q5M7Z0 435 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 TEPPQ6URK8 271 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 ITLN1Q8WWA0 313 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 TMEM204Q9BSN7 226 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 C11orf1Q9H5F2 150 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 VSIRQ9H7M9 311 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 PXMP4Q9Y6I8 212 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 EML6Q6ZMW3 1958 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 TRAV20A0A0B4J274 112 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 IGHV3-13P01766 116 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 IGHV3-7P01780 117 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 GLRXP35754 106 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 TIGITQ495A1 244 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 PLA2G2CQ5R387 149 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 TIMM23BQ5SRD1 257 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 FAM78BQ5VT40 261 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 MBNL2Q5VZF2 373 aaKnown RBP8.42□□□□□ -1.06
HMGCR-201ENST00000287936 ZDHHC16Q969W1 377 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 TMEM140Q9NV12 185 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 ADAMTS20P59510 1910 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 RAB4BP61018 213 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 GNB2P62879 340 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 WDR86Q86TI4 376 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 SLC24A4Q8NFF2 622 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 TMEM37Q8WXS4 190 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 PACRGQ96M98 296 aaPredicted RBP8.42□□□□□ -1.06
HMGCR-201ENST00000287936 SSX3Q99909 188 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 SRD5A3Q9H8P0 318 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 TRAPPC1Q9Y5R8 145 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 SHANK1Q9Y566 2161 aa8.42□□□□□ -1.06
HMGCR-201ENST00000287936 RBFOX2O43251 390 aaKnown RBP eCLIP8.41□□□□□ -1.06
HMGCR-201ENST00000287936 YPEL1O60688 119 aa8.41□□□□□ -1.06
HMGCR-201ENST00000287936 IGKV1-39P01597 117 aa8.41□□□□□ -1.06
HMGCR-201ENST00000287936 IGKV1D-39P04432 117 aa8.41□□□□□ -1.06
HMGCR-201ENST00000287936 TRGC1P0CF51 173 aa8.41□□□□□ -1.06
HMGCR-201ENST00000287936 KIR2DL2P43627 348 aaPredicted RBP8.41□□□□□ -1.06
HMGCR-201ENST00000287936 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.41□□□□□ -1.06
HMGCR-201ENST00000287936 OR10X1Q8NGY0 326 aa8.41□□□□□ -1.06
HMGCR-201ENST00000287936 MEGF10Q96KG7 1140 aa8.41□□□□□ -1.06
HMGCR-201ENST00000287936 YPEL2Q96QA6 119 aa8.41□□□□□ -1.06
HMGCR-201ENST00000287936 MRPL37Q9BZE1 423 aaKnown RBP8.41□□□□□ -1.06
HMGCR-201ENST00000287936 PATZ1Q9HBE1 687 aaKnown RBP8.41□□□□□ -1.06
HMGCR-201ENST00000287936 PLSCR4Q9NRQ2 329 aa8.41□□□□□ -1.06
HMGCR-201ENST00000287936 TMEM167BQ9NRX6 74 aa8.41□□□□□ -1.06
HMGCR-201ENST00000287936 SERTAD4Q9NUC0 356 aa8.41□□□□□ -1.06
HMGCR-201ENST00000287936 ZNF705FA8MVS1 300 aaPredicted RBP8.41□□□□□ -1.06
HMGCR-201ENST00000287936 ZNF705DP0CH99 300 aaPredicted RBP8.41□□□□□ -1.06
HMGCR-201ENST00000287936 ZNF705BP0CI00 300 aaPredicted RBP8.41□□□□□ -1.06
HMGCR-201ENST00000287936 TFF3Q07654 80 aa8.41□□□□□ -1.06
HMGCR-201ENST00000287936 TCF19Q9Y242 345 aa8.41□□□□□ -1.06
HMGCR-201ENST00000287936 SSUH2Q9Y2M2 353 aa8.41□□□□□ -1.06
HMGCR-201ENST00000287936 OR7C2O60412 319 aa8.41□□□□□ -1.06
HMGCR-201ENST00000287936 IGKV3-15P01624 115 aa8.41□□□□□ -1.06
HMGCR-201ENST00000287936 RPL30P62888 115 aaKnown RBP8.41□□□□□ -1.06
HMGCR-201ENST00000287936 RHOVQ96L33 236 aa8.41□□□□□ -1.06
HMGCR-201ENST00000287936 SH3BGRL2Q9UJC5 107 aa8.41□□□□□ -1.06
HMGCR-201ENST00000287936 TRAV38-1A0A0B4J264 116 aa8.41□□□□□ -1.06
HMGCR-201ENST00000287936 MLNRO43193 412 aa8.41□□□□□ -1.06
HMGCR-201ENST00000287936 HSPE1P61604 102 aaKnown RBP8.41□□□□□ -1.06
HMGCR-201ENST00000287936 MYPOPQ86VE0 399 aaPredicted RBP8.41□□□□□ -1.06
HMGCR-201ENST00000287936 RBMXL3Q8N7X1 1067 aaKnown RBP8.41□□□□□ -1.06
HMGCR-201ENST00000287936 CA5BP1Q8WTZ4 195 aa8.41□□□□□ -1.06
HMGCR-201ENST00000287936 SCGB1D1O95968 90 aa8.4□□□□□ -1.06
HMGCR-201ENST00000287936 BMP5P22003 454 aa8.4□□□□□ -1.06
HMGCR-201ENST00000287936 ARL16Q0P5N6 197 aa8.4□□□□□ -1.06
HMGCR-201ENST00000287936 Q6ZPA2 131 aa8.4□□□□□ -1.06
HMGCR-201ENST00000287936 TGIF2LYQ8IUE0 185 aa8.4□□□□□ -1.06
HMGCR-201ENST00000287936 COQ2Q96H96 371 aa8.4□□□□□ -1.06
HMGCR-201ENST00000287936 LRFN3Q9BTN0 628 aa8.4□□□□□ -1.06
HMGCR-201ENST00000287936 IGHV1-18A0A0C4DH31 117 aa8.4□□□□□ -1.06
HMGCR-201ENST00000287936 NDUFB3O43676 98 aa8.4□□□□□ -1.06
HMGCR-201ENST00000287936 BPIFB3P59826 476 aa8.4□□□□□ -1.06
HMGCR-201ENST00000287936 SSX8Q7RTT4 187 aa8.4□□□□□ -1.06
HMGCR-201ENST00000287936 ZNF383Q8NA42 475 aa8.4□□□□□ -1.06
HMGCR-201ENST00000287936 OR10G8Q8NGN5 311 aa8.4□□□□□ -1.06
HMGCR-201ENST00000287936 SSMEM1Q8WWF3 244 aa8.4□□□□□ -1.06
HMGCR-201ENST00000287936 DIRC2Q96SL1 478 aa8.4□□□□□ -1.06
HMGCR-201ENST00000287936 RNF2Q99496 336 aa8.4□□□□□ -1.06
HMGCR-201ENST00000287936 SFXN3Q9BWM7 321 aa8.4□□□□□ -1.06
HMGCR-201ENST00000287936 TECRQ9NZ01 308 aaKnown RBP8.4□□□□□ -1.06
HMGCR-201ENST00000287936 IDI2-AS1Q9NZ38 188 aa8.4□□□□□ -1.06
HMGCR-201ENST00000287936 DMRT1Q9Y5R6 373 aa8.4□□□□□ -1.06
HMGCR-201ENST00000287936 LRRC10Q5BKY1 277 aa8.4□□□□□ -1.07
HMGCR-201ENST00000287936 ACSM6Q6P461 480 aa8.4□□□□□ -1.07
HMGCR-201ENST00000287936 SAMD10Q9BYL1 202 aa8.4□□□□□ -1.07
HMGCR-201ENST00000287936 OR51B2Q9Y5P1 312 aa8.4□□□□□ -1.07
HMGCR-201ENST00000287936 TRBV24-1A0A075B6N3 115 aa8.39□□□□□ -1.07
HMGCR-201ENST00000287936 ZNF729A6NN14 1252 aaPredicted RBP8.39□□□□□ -1.07
HMGCR-201ENST00000287936 SRRM5B3KS81 715 aa8.39□□□□□ -1.07
HMGCR-201ENST00000287936 RD3LP0DJH9 198 aa8.39□□□□□ -1.07
HMGCR-201ENST00000287936 CCKARP32238 428 aa8.39□□□□□ -1.07
HMGCR-201ENST00000287936 DUTP33316 252 aaKnown RBP8.39□□□□□ -1.07
HMGCR-201ENST00000287936 OPRK1P41145 380 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms