RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 ZNF525Q8N782 197 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 H1FXQ92522 213 aaKnown RBP7.88□□□□□ -1.15
TRIM55-201ENST00000276573 ADTRPQ96IZ2 230 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 ZNF714Q96N38 554 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 TREM1Q9NP99 234 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 UMAD1C9J7I0 102 aa7.87□□□□□ -1.15
TRIM55-201ENST00000276573 RNASEK-C17orf49H0YIS7 233 aa7.87□□□□□ -1.15
TRIM55-201ENST00000276573 ZG16O60844 167 aa7.87□□□□□ -1.15
TRIM55-201ENST00000276573 RBMXL2O75526 392 aaKnown RBP7.87□□□□□ -1.15
TRIM55-201ENST00000276573 C1QL1O75973 258 aa7.87□□□□□ -1.15
TRIM55-201ENST00000276573 TSPAN15O95858 294 aa7.87□□□□□ -1.15
TRIM55-201ENST00000276573 APOC3P02656 99 aa7.87□□□□□ -1.15
TRIM55-201ENST00000276573 NQO2P16083 231 aa7.87□□□□□ -1.15
TRIM55-201ENST00000276573 HBG1P69891 147 aa7.87□□□□□ -1.15
TRIM55-201ENST00000276573 HBG2P69892 147 aa7.87□□□□□ -1.15
TRIM55-201ENST00000276573 COMMD1Q8N668 190 aa7.87□□□□□ -1.15
TRIM55-201ENST00000276573 ZNF383Q8NA42 475 aa7.87□□□□□ -1.15
TRIM55-201ENST00000276573 OR4S2Q8NH73 311 aa7.87□□□□□ -1.15
TRIM55-201ENST00000276573 DTD1Q8TEA8 209 aa7.87□□□□□ -1.15
TRIM55-201ENST00000276573 NARS2Q96I59 477 aaKnown RBP7.87□□□□□ -1.15
TRIM55-201ENST00000276573 CIB3Q96Q77 187 aaPredicted RBP7.87□□□□□ -1.15
TRIM55-201ENST00000276573 QTRT1Q9BXR0 403 aaKnown RBP7.87□□□□□ -1.15
TRIM55-201ENST00000276573 USF3Q68DE3 2245 aa7.87□□□□□ -1.15
TRIM55-201ENST00000276573 PIEZO1Q92508 2521 aa7.87□□□□□ -1.15
TRIM55-201ENST00000276573 LYNX1G3V0Z9 82 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 AGPAT2O15120 278 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 FSTL3O95633 263 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 LYNX1P0DP58 116 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 PPOXP50336 477 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 ERVK-16P61578 105 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 RUNX1Q01196 453 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 SSX9Q7RTT3 188 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 THNSL2Q86YJ6 484 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 OR4A16Q8NH70 328 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 SCGB1C1Q8TD33 95 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 ZDHHC16Q969W1 377 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 OR4C12Q96R67 309 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 MS4A7Q9GZW8 240 aaPredicted RBP7.86□□□□□ -1.15
TRIM55-201ENST00000276573 TMEM231Q9H6L2 316 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 UQCC1Q9NVA1 299 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 ARFGEF3Q5TH69 2177 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 PMS2P5A8MQ11 134 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 CEBPZOSA8MTT3 80 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 PPIHO43447 177 aaKnown RBP7.86□□□□□ -1.15
TRIM55-201ENST00000276573 CD5P06127 495 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 OR8U8P0C7N1 319 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 CT45A6P0DMU7 189 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 CT45A5P0DMU8 189 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 CT45A7P0DMV0 189 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 M6PRP20645 277 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 SNCAP37840 140 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 RELBQ01201 579 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 ZNF616Q08AN1 781 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 ATP6V1FQ16864 119 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 LRRC75BQ2VPJ9 315 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 C10orf91Q5T1B1 145 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 SLC25A24Q6NUK1 477 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 VKORC1L1Q8N0U8 176 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 OR52E5Q8NH55 327 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 FAM213BQ8TBF2 198 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 PARD6GQ9BYG4 376 aaPredicted RBP7.86□□□□□ -1.15
TRIM55-201ENST00000276573 FAM96BQ9Y3D0 163 aa7.86□□□□□ -1.15
TRIM55-201ENST00000276573 ROS1P08922 2347 aa7.85□□□□□ -1.15
TRIM55-201ENST00000276573 TRAV3A0A0B4J244 114 aa7.85□□□□□ -1.15
TRIM55-201ENST00000276573 TMEM8BA6NDV4 472 aa7.85□□□□□ -1.15
TRIM55-201ENST00000276573 IFNA17P01571 189 aa7.85□□□□□ -1.15
TRIM55-201ENST00000276573 DVL1P1P54792 670 aaPredicted RBP7.85□□□□□ -1.15
TRIM55-201ENST00000276573 DLX6P56179 175 aa7.85□□□□□ -1.15
TRIM55-201ENST00000276573 SPCS3P61009 180 aa7.85□□□□□ -1.15
TRIM55-201ENST00000276573 SLC38A11Q08AI6 406 aa7.85□□□□□ -1.15
TRIM55-201ENST00000276573 ATRAIDQ6UW56 229 aa7.85□□□□□ -1.15
TRIM55-201ENST00000276573 LILRB2Q8N423 598 aa7.85□□□□□ -1.15
TRIM55-201ENST00000276573 SCRT1Q9BWW7 348 aa7.85□□□□□ -1.15
TRIM55-201ENST00000276573 CBLN4Q9NTU7 201 aa7.85□□□□□ -1.15
TRIM55-201ENST00000276573 TMEM140Q9NV12 185 aa7.85□□□□□ -1.15
TRIM55-201ENST00000276573 ZNRD1Q9P1U0 126 aa7.85□□□□□ -1.15
TRIM55-201ENST00000276573 FBXO7Q9Y3I1 522 aa7.85□□□□□ -1.15
TRIM55-201ENST00000276573 DIDO1Q9BTC0 2240 aaKnown RBP7.85□□□□□ -1.15
TRIM55-201ENST00000276573 MED19A0JLT2 244 aaPredicted RBP7.84□□□□□ -1.15
TRIM55-201ENST00000276573 C9JQL5 133 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 F8W036 122 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 LY86O95711 162 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 OR2B8PP59922 312 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 GNB2P62879 340 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 DEFA5Q01523 94 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 POU2AF1Q16633 256 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 TMEM155Q4W5P6 130 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 C4orf17Q53FE4 359 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 PDLIM3Q53GG5 364 aaPredicted RBP7.84□□□□□ -1.15
TRIM55-201ENST00000276573 SPINK9Q5DT21 86 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 AKR1C8PQ5T2L2 129 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 OR8G2PQ6IF36 304 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 ZNF833PQ6ZTB9 187 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 C8orf31Q8N9H6 132 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 ZNF596Q8TC21 504 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 RAB39BQ96DA2 213 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 RHOVQ96L33 236 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 PSMG3Q9BT73 122 aaPredicted RBP7.84□□□□□ -1.15
TRIM55-201ENST00000276573 WDR61Q9GZS3 305 aaKnown RBP7.84□□□□□ -1.15
TRIM55-201ENST00000276573 YLPM1P49750 1951 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms