RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 RNF212Q495C1 297 aa13.86□□□□□ -0.19
VPS54-201ENST00000272322 SSMEM1Q8WWF3 244 aa13.86□□□□□ -0.19
VPS54-201ENST00000272322 DSCAMO60469 2012 aa13.86□□□□□ -0.19
VPS54-201ENST00000272322 LOC102723971A0A1B0GUV8 181 aa13.85□□□□□ -0.19
VPS54-201ENST00000272322 KLK10O43240 276 aa13.85□□□□□ -0.19
VPS54-201ENST00000272322 PROP1O75360 226 aa13.85□□□□□ -0.19
VPS54-201ENST00000272322 CLN5O75503 358 aa13.85□□□□□ -0.19
VPS54-201ENST00000272322 TNFSF13O75888 250 aa13.85□□□□□ -0.19
VPS54-201ENST00000272322 CYB5R3P00387 301 aaPredicted RBP13.85□□□□□ -0.19
VPS54-201ENST00000272322 AGAP20933 346 aa13.85□□□□□ -0.19
VPS54-201ENST00000272322 MSMO1Q15800 293 aa13.85□□□□□ -0.19
VPS54-201ENST00000272322 SEM1Q6ZVN7 128 aa13.85□□□□□ -0.19
VPS54-201ENST00000272322 ZNF709Q8N972 641 aa13.85□□□□□ -0.19
VPS54-201ENST00000272322 LSM10Q969L4 123 aaKnown RBP13.85□□□□□ -0.19
VPS54-201ENST00000272322 FAM122AQ96E09 287 aa13.85□□□□□ -0.19
VPS54-201ENST00000272322 WIPI2Q9Y4P8 454 aa13.85□□□□□ -0.19
VPS54-201ENST00000272322 IGKV1D-17A0A075B6S4 117 aa13.85□□□□□ -0.19
VPS54-201ENST00000272322 ZNF506Q5JVG8 444 aa13.85□□□□□ -0.19
VPS54-201ENST00000272322 R3HDM4Q96D70 268 aa13.85□□□□□ -0.19
VPS54-201ENST00000272322 PRR33A8MZF0 331 aa13.85□□□□□ -0.19
VPS54-201ENST00000272322 PAGE4O60829 102 aa13.85□□□□□ -0.19
VPS54-201ENST00000272322 CLDN14O95500 239 aa13.85□□□□□ -0.19
VPS54-201ENST00000272322 IFNA4P05014 189 aa13.85□□□□□ -0.19
VPS54-201ENST00000272322 UNKLQ9H9P5 680 aaKnown RBP13.85□□□□□ -0.19
VPS54-201ENST00000272322 ZNF71Q9NQZ8 489 aaPredicted RBP13.85□□□□□ -0.19
VPS54-201ENST00000272322 DOK5Q9P104 306 aa13.85□□□□□ -0.19
VPS54-201ENST00000272322 LMO1P25800 156 aa13.84□□□□□ -0.19
VPS54-201ENST00000272322 FAM90A2PQ658T7 463 aa13.84□□□□□ -0.19
VPS54-201ENST00000272322 HEPN1Q6WQI6 88 aa13.84□□□□□ -0.19
VPS54-201ENST00000272322 ZNF474Q6S9Z5 364 aaPredicted RBP13.84□□□□□ -0.19
VPS54-201ENST00000272322 LINC00587B1AMM8 73 aa13.84□□□□□ -0.19
VPS54-201ENST00000272322 HSPB1P04792 205 aaKnown RBP13.84□□□□□ -0.19
VPS54-201ENST00000272322 GCSAMQ8N6F7 178 aa13.84□□□□□ -0.19
VPS54-201ENST00000272322 RND1Q92730 232 aa13.84□□□□□ -0.19
VPS54-201ENST00000272322 RAB24Q969Q5 203 aa13.84□□□□□ -0.19
VPS54-201ENST00000272322 RALYQ9UKM9 306 aaKnown RBP13.84□□□□□ -0.19
VPS54-201ENST00000272322 GAB2Q9UQC2 676 aa13.84□□□□□ -0.19
VPS54-201ENST00000272322 NAV3Q8IVL0 2385 aa13.84□□□□□ -0.19
VPS54-201ENST00000272322 BSNQ9UPA5 3926 aa13.84□□□□□ -0.19
VPS54-201ENST00000272322 RNF212BA8MTL3 300 aa13.83□□□□□ -0.2
VPS54-201ENST00000272322 CCL13Q99616 98 aa13.83□□□□□ -0.2
VPS54-201ENST00000272322 GPR61Q9BZJ8 451 aa13.83□□□□□ -0.2
VPS54-201ENST00000272322 C1QTNF9BB2RNN3 333 aa13.83□□□□□ -0.2
VPS54-201ENST00000272322 AP4M1O00189 453 aa13.83□□□□□ -0.2
VPS54-201ENST00000272322 KHDC3LQ587J8 217 aa13.83□□□□□ -0.2
VPS54-201ENST00000272322 C1orf229Q6ZS94 237 aaPredicted RBP13.83□□□□□ -0.2
VPS54-201ENST00000272322 LYG1Q8N1E2 194 aa13.83□□□□□ -0.2
VPS54-201ENST00000272322 ELOVL1Q9BW60 279 aa13.83□□□□□ -0.2
VPS54-201ENST00000272322 ZADH2Q8N4Q0 377 aa13.83□□□□□ -0.2
VPS54-201ENST00000272322 SNX22Q96L94 193 aa13.83□□□□□ -0.2
VPS54-201ENST00000272322 MIOXQ9UGB7 285 aa13.83□□□□□ -0.2
VPS54-201ENST00000272322 RRHO14718 337 aa13.82□□□□□ -0.2
VPS54-201ENST00000272322 CHRNA7P36544 502 aa13.82□□□□□ -0.2
VPS54-201ENST00000272322 TMEM41BQ5BJD5 291 aa13.82□□□□□ -0.2
VPS54-201ENST00000272322 OR4A16Q8NH70 328 aa13.82□□□□□ -0.2
VPS54-201ENST00000272322 CA5BP1Q8WTZ4 195 aa13.82□□□□□ -0.2
VPS54-201ENST00000272322 GFOD1Q9NXC2 390 aa13.82□□□□□ -0.2
VPS54-201ENST00000272322 MALRD1Q5VYJ5 2156 aa13.82□□□□□ -0.2
VPS54-201ENST00000272322 BTBD17A6NE02 478 aa13.82□□□□□ -0.2
VPS54-201ENST00000272322 IGHG3P01860 377 aa13.82□□□□□ -0.2
VPS54-201ENST00000272322 REG1BP48304 166 aa13.82□□□□□ -0.2
VPS54-201ENST00000272322 FAM216BQ8N7L0 139 aa13.82□□□□□ -0.2
VPS54-201ENST00000272322 POM121Q96HA1 1249 aa13.82□□□□□ -0.2
VPS54-201ENST00000272322 TRAV20A0A0B4J274 112 aa13.81□□□□□ -0.2
VPS54-201ENST00000272322 A0A1W2PPQ1 181 aa13.81□□□□□ -0.2
VPS54-201ENST00000272322 IGHV3-48P01763 117 aa13.81□□□□□ -0.2
VPS54-201ENST00000272322 GYPAP02724 150 aa13.81□□□□□ -0.2
VPS54-201ENST00000272322 SLC35E4Q6ICL7 350 aa13.81□□□□□ -0.2
VPS54-201ENST00000272322 OR10D4PQ8NGN7 298 aa13.81□□□□□ -0.2
VPS54-201ENST00000272322 FAM210BQ96KR6 192 aa13.81□□□□□ -0.2
VPS54-201ENST00000272322 WFIKKN1Q96NZ8 548 aa13.81□□□□□ -0.2
VPS54-201ENST00000272322 EGLN1Q9GZT9 426 aa13.81□□□□□ -0.2
VPS54-201ENST00000272322 TMEM210A6NLX4 147 aa13.81□□□□□ -0.2
VPS54-201ENST00000272322 SLC25A6P12236 298 aa13.81□□□□□ -0.2
VPS54-201ENST00000272322 AGMATQ9BSE5 352 aa13.81□□□□□ -0.2
VPS54-201ENST00000272322 DERL1Q9BUN8 251 aa13.81□□□□□ -0.2
VPS54-201ENST00000272322 WASF3Q9UPY6 502 aa13.81□□□□□ -0.2
VPS54-201ENST00000272322 KLF2Q9Y5W3 355 aaPredicted RBP13.81□□□□□ -0.2
VPS54-201ENST00000272322 ACTL6BO94805 426 aa13.81□□□□□ -0.2
VPS54-201ENST00000272322 WFDC8Q8IUA0 241 aa13.81□□□□□ -0.2
VPS54-201ENST00000272322 ANKHD1Q8IWZ3 2542 aaKnown RBP13.8□□□□□ -0.2
VPS54-201ENST00000272322 TM4SF5O14894 197 aa13.8□□□□□ -0.2
VPS54-201ENST00000272322 NDUFB7P17568 137 aa13.8□□□□□ -0.2
VPS54-201ENST00000272322 S100PP25815 95 aa13.8□□□□□ -0.2
VPS54-201ENST00000272322 CD81P60033 236 aa13.8□□□□□ -0.2
VPS54-201ENST00000272322 FRZBQ92765 325 aa13.8□□□□□ -0.2
VPS54-201ENST00000272322 HSPB7Q9UBY9 170 aa13.8□□□□□ -0.2
VPS54-201ENST00000272322 TANC2Q9HCD6 1990 aa13.8□□□□□ -0.2
VPS54-201ENST00000272322 MMP23AO75900 390 aa13.8□□□□□ -0.2
VPS54-201ENST00000272322 CEACAM1P13688 526 aa13.8□□□□□ -0.2
VPS54-201ENST00000272322 MIC13Q5XKP0 118 aa13.8□□□□□ -0.2
VPS54-201ENST00000272322 TMEM14EPQ6UXP3 125 aa13.8□□□□□ -0.2
VPS54-201ENST00000272322 NKX6-1P78426 367 aaPredicted RBP13.8□□□□□ -0.2
VPS54-201ENST00000272322 NPCDR1Q9BY65 106 aa13.8□□□□□ -0.2
VPS54-201ENST00000272322 IFT22Q9H7X7 185 aa13.8□□□□□ -0.2
VPS54-201ENST00000272322 LAMP3Q9UQV4 416 aa13.8□□□□□ -0.2
VPS54-201ENST00000272322 DCHS2Q6V1P9 2916 aa13.79□□□□□ -0.2
VPS54-201ENST00000272322 AQP7O14520 342 aa13.79□□□□□ -0.2
VPS54-201ENST00000272322 HIST1H2BKO60814 126 aa13.79□□□□□ -0.2
VPS54-201ENST00000272322 HIST1H2BJP06899 126 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms