RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 TANC2Q9HCD6 1990 aa12.66□□□□□ -0.38
SF3B4-201ENST00000271628 KIAA1324LA8MWY0 1029 aaPredicted RBP12.66□□□□□ -0.38
SF3B4-201ENST00000271628 FAM90A26D6RGX4 464 aa12.66□□□□□ -0.38
SF3B4-201ENST00000271628 M0R036 132 aa12.66□□□□□ -0.38
SF3B4-201ENST00000271628 PLAUP00749 431 aa12.66□□□□□ -0.38
SF3B4-201ENST00000271628 OMGP23515 440 aa12.66□□□□□ -0.38
SF3B4-201ENST00000271628 RPL23AP62750 156 aaKnown RBP12.66□□□□□ -0.38
SF3B4-201ENST00000271628 CLINT1Q14677 625 aa12.66□□□□□ -0.38
SF3B4-201ENST00000271628 Q3ZCU0 254 aa12.66□□□□□ -0.38
SF3B4-201ENST00000271628 ZNF672Q499Z4 452 aaPredicted RBP12.66□□□□□ -0.38
SF3B4-201ENST00000271628 BTNL3Q6UXE8 466 aa12.66□□□□□ -0.38
SF3B4-201ENST00000271628 ZFP82Q8N141 532 aa12.66□□□□□ -0.38
SF3B4-201ENST00000271628 FBXO7Q9Y3I1 522 aa12.66□□□□□ -0.38
SF3B4-201ENST00000271628 LINC00312Q9Y6C7 94 aa12.66□□□□□ -0.38
SF3B4-201ENST00000271628 WSB1Q9Y6I7 421 aa12.66□□□□□ -0.38
SF3B4-201ENST00000271628 ITPR1Q14643 2758 aa12.66□□□□□ -0.38
SF3B4-201ENST00000271628 IGHV1-69-2A0A0G2JMI3 117 aa12.65□□□□□ -0.38
SF3B4-201ENST00000271628 PCP4L1A6NKN8 68 aa12.65□□□□□ -0.38
SF3B4-201ENST00000271628 RAMP3O60896 148 aa12.65□□□□□ -0.38
SF3B4-201ENST00000271628 NDUFB7P17568 137 aa12.65□□□□□ -0.38
SF3B4-201ENST00000271628 OR10A7Q8NGE5 316 aa12.65□□□□□ -0.38
SF3B4-201ENST00000271628 HIPK2Q9H2X6 1198 aa12.65□□□□□ -0.38
SF3B4-201ENST00000271628 IDI2-AS1Q9NZ38 188 aa12.65□□□□□ -0.38
SF3B4-201ENST00000271628 LINC00473A8K010 186 aa12.65□□□□□ -0.39
SF3B4-201ENST00000271628 SYNGR2O43760 224 aa12.65□□□□□ -0.39
SF3B4-201ENST00000271628 DUTP33316 252 aaKnown RBP12.65□□□□□ -0.39
SF3B4-201ENST00000271628 AKR1C3P42330 323 aa12.65□□□□□ -0.39
SF3B4-201ENST00000271628 CDSNQ15517 529 aa12.65□□□□□ -0.39
SF3B4-201ENST00000271628 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.65□□□□□ -0.39
SF3B4-201ENST00000271628 OR5C1Q8NGR4 320 aa12.65□□□□□ -0.39
SF3B4-201ENST00000271628 TMEM204Q9BSN7 226 aa12.65□□□□□ -0.39
SF3B4-201ENST00000271628 ABHD14AQ9BUJ0 271 aa12.65□□□□□ -0.39
SF3B4-201ENST00000271628 GAL3ST2Q9H3Q3 398 aa12.65□□□□□ -0.39
SF3B4-201ENST00000271628 KAAG1Q9UBP8 84 aa12.65□□□□□ -0.39
SF3B4-201ENST00000271628 C17orf98A8MV24 154 aa12.64□□□□□ -0.39
SF3B4-201ENST00000271628 TNFRSF13BO14836 293 aaPredicted RBP12.64□□□□□ -0.39
SF3B4-201ENST00000271628 KRASP01116 189 aa12.64□□□□□ -0.39
SF3B4-201ENST00000271628 AGAP20933 346 aa12.64□□□□□ -0.39
SF3B4-201ENST00000271628 MEOX2P50222 304 aa12.64□□□□□ -0.39
SF3B4-201ENST00000271628 ZNF134P52741 427 aa12.64□□□□□ -0.39
SF3B4-201ENST00000271628 TFF3Q07654 80 aa12.64□□□□□ -0.39
SF3B4-201ENST00000271628 ZNF816Q0VGE8 651 aaPredicted RBP12.64□□□□□ -0.39
SF3B4-201ENST00000271628 SOHLH1Q5JUK2 328 aa12.64□□□□□ -0.39
SF3B4-201ENST00000271628 CACNA1AO00555 2505 aa12.64□□□□□ -0.39
SF3B4-201ENST00000271628 ATRXP46100 2492 aa12.64□□□□□ -0.39
SF3B4-201ENST00000271628 RBFOX3A6NFN3 312 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 SIAH2O43255 324 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 NDUFB3O43676 98 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 NXPH3O95157 252 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 S100A6P06703 90 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 BRWD1-AS2P59051 145 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 S100A12P80511 92 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 IZUMO4Q1ZYL8 232 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 LRRC10Q5BKY1 277 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 OR2B11Q5JQS5 317 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 DPPA3Q6W0C5 159 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 TCF23Q7RTU1 214 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 IFI27L2Q9H2X8 130 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 KIAA1456Q9P272 454 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 RELNP78509 3460 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 C5orf52A6NGY3 159 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 RAB29O14966 203 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 PROP1O75360 226 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 S1PR2O95136 353 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 TMEM50AO95807 157 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 HPRT1P00492 218 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 G6PCP35575 357 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 SULT1A1P50225 295 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 DYNLT3P51808 116 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 PAX9P55771 341 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 TAS2R30P59541 319 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 RPL31P62899 125 aaKnown RBP12.63□□□□□ -0.39
SF3B4-201ENST00000271628 STX12Q86Y82 276 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 MALSU1Q96EH3 234 aa12.63□□□□□ -0.39
SF3B4-201ENST00000271628 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.63□□□□□ -0.39
SF3B4-201ENST00000271628 RBFOX2O43251 390 aaKnown RBP eCLIP12.62□□□□□ -0.39
SF3B4-201ENST00000271628 FSTL3O95633 263 aa12.62□□□□□ -0.39
SF3B4-201ENST00000271628 P0C879 139 aa12.62□□□□□ -0.39
SF3B4-201ENST00000271628 OR13C7P0DN81 318 aa12.62□□□□□ -0.39
SF3B4-201ENST00000271628 MAS1LP35410 378 aa12.62□□□□□ -0.39
SF3B4-201ENST00000271628 KIR2DS2P43631 304 aa12.62□□□□□ -0.39
SF3B4-201ENST00000271628 PPOXP50336 477 aa12.62□□□□□ -0.39
SF3B4-201ENST00000271628 SNRPEP62304 92 aaKnown RBP12.62□□□□□ -0.39
SF3B4-201ENST00000271628 CT45A1Q5HYN5 189 aa12.62□□□□□ -0.39
SF3B4-201ENST00000271628 SPSB3Q6PJ21 355 aa12.62□□□□□ -0.39
SF3B4-201ENST00000271628 CT45A3Q8NHU0 189 aa12.62□□□□□ -0.39
SF3B4-201ENST00000271628 RPUSD1Q9UJJ7 312 aaKnown RBP12.62□□□□□ -0.39
SF3B4-201ENST00000271628 ROS1P08922 2347 aa12.62□□□□□ -0.39
SF3B4-201ENST00000271628 M0R1X1 148 aa12.61□□□□□ -0.39
SF3B4-201ENST00000271628 UBE2CO00762 179 aa12.61□□□□□ -0.39
SF3B4-201ENST00000271628 GPR37O15354 613 aa12.61□□□□□ -0.39
SF3B4-201ENST00000271628 TXNL1O43396 289 aa12.61□□□□□ -0.39
SF3B4-201ENST00000271628 DFFBO76075 338 aa12.61□□□□□ -0.39
SF3B4-201ENST00000271628 CST7O76096 145 aa12.61□□□□□ -0.39
SF3B4-201ENST00000271628 S100A8P05109 93 aa12.61□□□□□ -0.39
SF3B4-201ENST00000271628 RAB5AP20339 215 aa12.61□□□□□ -0.39
SF3B4-201ENST00000271628 RAB2AP61019 212 aa12.61□□□□□ -0.39
SF3B4-201ENST00000271628 TLE4Q04727 773 aa12.61□□□□□ -0.39
SF3B4-201ENST00000271628 NCR3LG1Q68D85 454 aa12.61□□□□□ -0.39
SF3B4-201ENST00000271628 SP5Q6BEB4 398 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms