RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 ZNF273Q14593 569 aa20.05■□□□□ 0.8
SSBP4-201ENST00000270061 BTNL3Q6UXE8 466 aa20.05■□□□□ 0.8
SSBP4-201ENST00000270061 LSM10Q969L4 123 aaKnown RBP20.05■□□□□ 0.8
SSBP4-201ENST00000270061 RLN2P04090 185 aa20.04■□□□□ 0.8
SSBP4-201ENST00000270061 SLC25A6P12236 298 aa20.04■□□□□ 0.8
SSBP4-201ENST00000270061 GPR12P47775 334 aa20.04■□□□□ 0.8
SSBP4-201ENST00000270061 WDR25Q64LD2 544 aaPredicted RBP20.04■□□□□ 0.8
SSBP4-201ENST00000270061 TEX261Q6UWH6 196 aa20.04■□□□□ 0.8
SSBP4-201ENST00000270061 ZNF439Q8NDP4 499 aa20.04■□□□□ 0.8
SSBP4-201ENST00000270061 ZNF418Q8TF45 676 aaPredicted RBP20.04■□□□□ 0.8
SSBP4-201ENST00000270061 DCUN1D4Q92564 292 aa20.04■□□□□ 0.8
SSBP4-201ENST00000270061 ZNF714Q96N38 554 aa20.04■□□□□ 0.8
SSBP4-201ENST00000270061 IFI27L2Q9H2X8 130 aa20.04■□□□□ 0.8
SSBP4-201ENST00000270061 OR5AC2Q9NZP5 309 aa20.04■□□□□ 0.8
SSBP4-201ENST00000270061 U3KQ87 197 aa20.04■□□□□ 0.8
SSBP4-201ENST00000270061 TRBV23-1A0A0A0MS06 115 aa20.03■□□□□ 0.8
SSBP4-201ENST00000270061 GPR37O15354 613 aa20.03■□□□□ 0.8
SSBP4-201ENST00000270061 DEDDO75618 318 aa20.03■□□□□ 0.8
SSBP4-201ENST00000270061 IGKV1-39P01597 117 aa20.03■□□□□ 0.8
SSBP4-201ENST00000270061 MBPP02686 304 aaPredicted RBP20.03■□□□□ 0.8
SSBP4-201ENST00000270061 IGKV1D-39P04432 117 aa20.03■□□□□ 0.8
SSBP4-201ENST00000270061 RPL30P62888 115 aaKnown RBP20.03■□□□□ 0.8
SSBP4-201ENST00000270061 PAX2Q02962 417 aa20.03■□□□□ 0.8
SSBP4-201ENST00000270061 HEPN1Q6WQI6 88 aa20.03■□□□□ 0.8
SSBP4-201ENST00000270061 ZNF841Q6ZN19 808 aa20.03■□□□□ 0.8
SSBP4-201ENST00000270061 OR1S1Q8NH92 325 aa20.03■□□□□ 0.8
SSBP4-201ENST00000270061 ABHD14AQ9BUJ0 271 aa20.03■□□□□ 0.8
SSBP4-201ENST00000270061 IGHV2-70DA0A0C4DH43 119 aa20.03■□□□□ 0.8
SSBP4-201ENST00000270061 FSHBP01225 129 aa20.03■□□□□ 0.8
SSBP4-201ENST00000270061 S100A10P60903 97 aa20.03■□□□□ 0.8
SSBP4-201ENST00000270061 SMCO1Q147U7 214 aa20.03■□□□□ 0.8
SSBP4-201ENST00000270061 CT45A1Q5HYN5 189 aa20.03■□□□□ 0.8
SSBP4-201ENST00000270061 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.03■□□□□ 0.8
SSBP4-201ENST00000270061 CT45A3Q8NHU0 189 aa20.03■□□□□ 0.8
SSBP4-201ENST00000270061 PROP1O75360 226 aa20.02■□□□□ 0.8
SSBP4-201ENST00000270061 PAX8Q06710 450 aa20.02■□□□□ 0.8
SSBP4-201ENST00000270061 Q3ZCU0 254 aa20.02■□□□□ 0.8
SSBP4-201ENST00000270061 OR8H1Q8NGG4 311 aa20.02■□□□□ 0.8
SSBP4-201ENST00000270061 H1FXQ92522 213 aaKnown RBP20.02■□□□□ 0.8
SSBP4-201ENST00000270061 A0A1B0GU03 582 aa20.01■□□□□ 0.79
SSBP4-201ENST00000270061 K7EPK0 472 aa20.01■□□□□ 0.79
SSBP4-201ENST00000270061 MMP23AO75900 390 aa20.01■□□□□ 0.79
SSBP4-201ENST00000270061 THOC7Q6I9Y2 204 aaKnown RBP20.01■□□□□ 0.79
SSBP4-201ENST00000270061 FAM71E2Q8N5Q1 922 aa20.01■□□□□ 0.79
SSBP4-201ENST00000270061 AQP10Q96PS8 301 aa20.01■□□□□ 0.79
SSBP4-201ENST00000270061 C19orf24Q9BVV8 132 aa20.01■□□□□ 0.79
SSBP4-201ENST00000270061 ST8SIA3O43173 380 aa20■□□□□ 0.79
SSBP4-201ENST00000270061 DUTP33316 252 aaKnown RBP20■□□□□ 0.79
SSBP4-201ENST00000270061 NUP62P37198 522 aaPredicted RBP20■□□□□ 0.79
SSBP4-201ENST00000270061 AP2S1P53680 142 aaPredicted RBP20■□□□□ 0.79
SSBP4-201ENST00000270061 PRAMEF5Q5TYX0 476 aa20■□□□□ 0.79
SSBP4-201ENST00000270061 ZNF680Q8NEM1 530 aa20■□□□□ 0.79
SSBP4-201ENST00000270061 RRNAD1Q96FB5 475 aaKnown RBP20■□□□□ 0.79
SSBP4-201ENST00000270061 POMT1Q9Y6A1 747 aa20■□□□□ 0.79
SSBP4-201ENST00000270061 SLC31A2O15432 143 aa20■□□□□ 0.79
SSBP4-201ENST00000270061 NFYBP25208 207 aa20■□□□□ 0.79
SSBP4-201ENST00000270061 LPAR6P43657 344 aa20■□□□□ 0.79
SSBP4-201ENST00000270061 DLX6P56179 175 aa20■□□□□ 0.79
SSBP4-201ENST00000270061 BRWD1-AS2P59051 145 aa20■□□□□ 0.79
SSBP4-201ENST00000270061 UTF1Q5T230 341 aa20■□□□□ 0.79
SSBP4-201ENST00000270061 CD300LFQ8TDQ1 290 aa20■□□□□ 0.79
SSBP4-201ENST00000270061 TCTEX1D2Q8WW35 142 aa20■□□□□ 0.79
SSBP4-201ENST00000270061 GPR146Q96CH1 333 aa20■□□□□ 0.79
SSBP4-201ENST00000270061 PITX3O75364 302 aa19.99■□□□□ 0.79
SSBP4-201ENST00000270061 SLC25A48Q6ZT89 311 aaKnown RBP19.99■□□□□ 0.79
SSBP4-201ENST00000270061 SLC51BQ86UW2 128 aa19.99■□□□□ 0.79
SSBP4-201ENST00000270061 C22orf15Q8WYQ4 148 aa19.99■□□□□ 0.79
SSBP4-201ENST00000270061 LSM5Q9Y4Y9 91 aaKnown RBP19.99■□□□□ 0.79
SSBP4-201ENST00000270061 KANTRA0A1W2PQU2 76 aa19.98■□□□□ 0.79
SSBP4-201ENST00000270061 LINC00473A8K010 186 aa19.98■□□□□ 0.79
SSBP4-201ENST00000270061 E5RGE8 158 aa19.98■□□□□ 0.79
SSBP4-201ENST00000270061 RAB29O14966 203 aa19.98■□□□□ 0.79
SSBP4-201ENST00000270061 BCL2L11O43521 198 aa19.98■□□□□ 0.79
SSBP4-201ENST00000270061 VENTXO95231 258 aa19.98■□□□□ 0.79
SSBP4-201ENST00000270061 SCGB1D2O95969 90 aa19.98■□□□□ 0.79
SSBP4-201ENST00000270061 PPIAL4GP0DN37 164 aa19.98■□□□□ 0.79
SSBP4-201ENST00000270061 CCL3L1P16619 93 aa19.98■□□□□ 0.79
SSBP4-201ENST00000270061 SPAG16Q8N0X2 631 aa19.98■□□□□ 0.79
SSBP4-201ENST00000270061 LEAP2Q969E1 77 aa19.98■□□□□ 0.79
SSBP4-201ENST00000270061 NUP50Q9UKX7 468 aa19.98■□□□□ 0.79
SSBP4-201ENST00000270061 NSG2Q9Y328 171 aa19.98■□□□□ 0.79
SSBP4-201ENST00000270061 A0A0G2JRQ6 117 aa19.98■□□□□ 0.79
SSBP4-201ENST00000270061 C17orf98A8MV24 154 aa19.98■□□□□ 0.79
SSBP4-201ENST00000270061 ENSAO43768 121 aaKnown RBP19.98■□□□□ 0.79
SSBP4-201ENST00000270061 ATG12O94817 140 aa19.98■□□□□ 0.79
SSBP4-201ENST00000270061 IFNA7P01567 189 aa19.98■□□□□ 0.79
SSBP4-201ENST00000270061 IGKV1-5P01602 117 aa19.98■□□□□ 0.79
SSBP4-201ENST00000270061 NKX2-1P43699 371 aaPredicted RBP19.98■□□□□ 0.79
SSBP4-201ENST00000270061 ID3Q02535 119 aa19.98■□□□□ 0.79
SSBP4-201ENST00000270061 FAM219AQ8IW50 185 aa19.98■□□□□ 0.79
SSBP4-201ENST00000270061 FOXRED2Q8IWF2 684 aa19.98■□□□□ 0.79
SSBP4-201ENST00000270061 ODF3L1Q8IXM7 274 aa19.98■□□□□ 0.79
SSBP4-201ENST00000270061 C8orf31Q8N9H6 132 aa19.98■□□□□ 0.79
SSBP4-201ENST00000270061 C22orf46C9J442 243 aa19.97■□□□□ 0.79
SSBP4-201ENST00000270061 RAMP3O60896 148 aa19.97■□□□□ 0.79
SSBP4-201ENST00000270061 IGHV3-7P01780 117 aa19.97■□□□□ 0.79
SSBP4-201ENST00000270061 HILS1P60008 231 aa19.97■□□□□ 0.79
SSBP4-201ENST00000270061 KLF17Q5JT82 389 aaPredicted RBP19.97■□□□□ 0.79
SSBP4-201ENST00000270061 PLEKHA2Q9HB19 425 aa19.97■□□□□ 0.79
SSBP4-201ENST00000270061 NDUFA5Q16718 116 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms