RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 ACACAQ13085 2346 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 CACNA1GO43497 2377 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 hCG_38984A0A1B0GV85 526 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 DHRS7CA6NNS2 312 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 MELTFP08582 738 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 AREGP15514 252 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 BTF3P20290 206 aaKnown RBP6.73□□□□□ -1.33
USP3-201ENST00000268049 ERVK11-1P61568 191 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 KLF9Q13886 244 aaPredicted RBP6.73□□□□□ -1.33
USP3-201ENST00000268049 LRRC75BQ2VPJ9 315 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 C10orf126Q8N4M7 172 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 ZIC4Q8N9L1 334 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 OR10J6PQ8NGY7 276 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 SIGLEC11Q96RL6 698 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 PARLQ9H300 379 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 KCNE3Q9Y6H6 103 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 IGHV3OR16-12A0A075B7B8 117 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 TMEM272A0A1B0GTI8 110 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 TIAF1O95411 115 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 HTN1P15515 57 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 RIPPLY3P57055 190 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 ZNF506Q5JVG8 444 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 Q6ZS92 163 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 CYB561D1Q8N8Q1 229 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 TMEM45BQ96B21 275 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 SPSB2Q99619 263 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 ANAPC13Q9BS18 74 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 SLC7A10Q9NS82 523 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 DLL3Q9NYJ7 618 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 ICAM5Q9UMF0 924 aa6.73□□□□□ -1.33
USP3-201ENST00000268049 PLXNA4Q9HCM2 1894 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 TSPAN13O95857 204 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 MMP9P14780 707 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 DYNLT3P51808 116 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 Q0VFX4 171 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 PLA2G2CQ5R387 149 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 TSPO2Q5TGU0 170 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 OR10S1Q8NGN2 331 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 HARBI1Q96MB7 349 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 SIGMAR1Q99720 223 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 NAA60Q9H7X0 242 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 TRAV30A0A087WSZ9 112 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 A0A0J9YW62 118 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 CHST1O43916 411 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 NDUFS6O75380 124 aaKnown RBP6.72□□□□□ -1.33
USP3-201ENST00000268049 MT-ND6P03923 174 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 P2RY4P51582 365 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 COLCA1Q6ZS62 124 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 FBLIM1Q8WUP2 373 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 GREB1Q4ZG55 1949 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 A0A0B4J2E0 115 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 A0A1B0GX12 115 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 CDIPTO14735 213 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 CELA2AP08217 269 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 RPL30P62888 115 aaKnown RBP6.72□□□□□ -1.33
USP3-201ENST00000268049 SGMS2Q8NHU3 365 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 IGHV3OR15-7A0A075B7D8 119 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 RNF223E7ERA6 249 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 LYZP61626 148 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 ERASQ7Z444 233 aa6.72□□□□□ -1.33
USP3-201ENST00000268049 MRPL30Q8TCC3 161 aaKnown RBP6.72□□□□□ -1.33
USP3-201ENST00000268049 TECRQ9NZ01 308 aaKnown RBP6.72□□□□□ -1.33
USP3-201ENST00000268049 TFPI2P48307 235 aa6.71□□□□□ -1.33
USP3-201ENST00000268049 ZNF816Q0VGE8 651 aaPredicted RBP6.71□□□□□ -1.33
USP3-201ENST00000268049 DNLZQ5SXM8 178 aa6.71□□□□□ -1.33
USP3-201ENST00000268049 LDLRAD2Q5SZI1 272 aa6.71□□□□□ -1.33
USP3-201ENST00000268049 MMD2Q8IY49 270 aa6.71□□□□□ -1.33
USP3-201ENST00000268049 H0Y980 276 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 SEMG1P04279 462 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 SLC25A5P05141 298 aaKnown RBP6.71□□□□□ -1.34
USP3-201ENST00000268049 OR8I2Q8N0Y5 310 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 TMEM52Q8NDY8 209 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 OR1L8Q8NGR8 309 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 RFESDQ8TAC1 157 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 PMCHL2Q9BQD1 86 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 LINC00470Q9BZP3 86 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 CRIM1Q9NZV1 1036 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 UFC1Q9Y3C8 167 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 ZNF205O95201 554 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 LINC00614P0C842 121 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 HIST1H1DP16402 221 aaKnown RBP6.71□□□□□ -1.34
USP3-201ENST00000268049 STARD10Q9Y365 291 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 IGKV3-7A0A075B6H7 116 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 C3orf85A0A1B0GTC6 90 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 OR2T8A6NH00 312 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 DEFB108AA8MXU0 73 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 HRKO00198 91 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 SPRY1O43609 319 aaPredicted RBP6.71□□□□□ -1.34
USP3-201ENST00000268049 PSCAO43653 123 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 TRGV3P03979 118 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 RPS27P42677 84 aaKnown RBP6.71□□□□□ -1.34
USP3-201ENST00000268049 DLX1P56177 255 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 FBLN7Q53RD9 439 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 PNKDQ8N490 385 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 G6PC2Q9NQR9 355 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 DPM3Q9P2X0 92 aa6.71□□□□□ -1.34
USP3-201ENST00000268049 NLRC5Q86WI3 1866 aa6.7□□□□□ -1.34
USP3-201ENST00000268049 SAP30O75446 220 aa6.7□□□□□ -1.34
USP3-201ENST00000268049 WISP3O95389 354 aaPredicted RBP6.7□□□□□ -1.34
USP3-201ENST00000268049 HPRT1P00492 218 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms