RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 RNF7Q9UBF6 113 aa9.2□□□□□ -0.94
MSH3-201ENST00000265081 VAX2Q9UIW0 290 aa9.2□□□□□ -0.94
MSH3-201ENST00000265081 PRELID1Q9Y255 219 aa9.2□□□□□ -0.94
MSH3-201ENST00000265081 FOXA2Q9Y261 457 aaPredicted RBP9.2□□□□□ -0.94
MSH3-201ENST00000265081 CNTRLQ7Z7A1 2325 aa9.2□□□□□ -0.94
MSH3-201ENST00000265081 A0A0G2JNJ9 132 aa9.2□□□□□ -0.94
MSH3-201ENST00000265081 WDR25Q64LD2 544 aaPredicted RBP9.2□□□□□ -0.94
MSH3-201ENST00000265081 LILRB2Q8N423 598 aa9.2□□□□□ -0.94
MSH3-201ENST00000265081 TMEM14BQ9NUH8 114 aa9.2□□□□□ -0.94
MSH3-201ENST00000265081 METTL1Q9UBP6 276 aaKnown RBP9.2□□□□□ -0.94
MSH3-201ENST00000265081 Q9UFV3 132 aa9.2□□□□□ -0.94
MSH3-201ENST00000265081 WDR83OSQ9Y284 106 aa9.2□□□□□ -0.94
MSH3-201ENST00000265081 FNDC10F2Z333 226 aa9.2□□□□□ -0.94
MSH3-201ENST00000265081 GPR12P47775 334 aa9.2□□□□□ -0.94
MSH3-201ENST00000265081 ELOBQ15370 118 aa9.2□□□□□ -0.94
MSH3-201ENST00000265081 DOLPP1Q86YN1 238 aa9.2□□□□□ -0.94
MSH3-201ENST00000265081 IGHV3-43A0A0B4J1X8 118 aa9.19□□□□□ -0.94
MSH3-201ENST00000265081 UBE2L5PA0A1B0GUS4 154 aa9.19□□□□□ -0.94
MSH3-201ENST00000265081 TSPAN9O75954 239 aa9.19□□□□□ -0.94
MSH3-201ENST00000265081 THBDP07204 575 aa9.19□□□□□ -0.94
MSH3-201ENST00000265081 IGHV3-43DP0DP04 118 aa9.19□□□□□ -0.94
MSH3-201ENST00000265081 LINC00205P59089 165 aa9.19□□□□□ -0.94
MSH3-201ENST00000265081 CD81P60033 236 aa9.19□□□□□ -0.94
MSH3-201ENST00000265081 CT45A1Q5HYN5 189 aa9.19□□□□□ -0.94
MSH3-201ENST00000265081 UTF1Q5T230 341 aa9.19□□□□□ -0.94
MSH3-201ENST00000265081 C8orf31Q8N9H6 132 aa9.19□□□□□ -0.94
MSH3-201ENST00000265081 CT45A3Q8NHU0 189 aa9.19□□□□□ -0.94
MSH3-201ENST00000265081 PRR14LQ5THK1 2151 aa9.19□□□□□ -0.94
MSH3-201ENST00000265081 CTXND1A0A1B0GTU2 59 aa9.19□□□□□ -0.94
MSH3-201ENST00000265081 A0A1W2PPE2 198 aa9.19□□□□□ -0.94
MSH3-201ENST00000265081 ZNF729A6NN14 1252 aaPredicted RBP9.19□□□□□ -0.94
MSH3-201ENST00000265081 SLC31A2O15432 143 aa9.19□□□□□ -0.94
MSH3-201ENST00000265081 RAB5BP61020 215 aa9.19□□□□□ -0.94
MSH3-201ENST00000265081 DLK1P80370 383 aa9.19□□□□□ -0.94
MSH3-201ENST00000265081 ZNRF1Q8ND25 227 aa9.19□□□□□ -0.94
MSH3-201ENST00000265081 ZNF665Q9H7R5 613 aa9.19□□□□□ -0.94
MSH3-201ENST00000265081 SDF2L1Q9HCN8 221 aa9.19□□□□□ -0.94
MSH3-201ENST00000265081 LSM4Q9Y4Z0 139 aaKnown RBP9.19□□□□□ -0.94
MSH3-201ENST00000265081 MPDU1O75352 247 aa9.19□□□□□ -0.94
MSH3-201ENST00000265081 FCN3O75636 299 aa9.19□□□□□ -0.94
MSH3-201ENST00000265081 FBP1P09467 338 aa9.19□□□□□ -0.94
MSH3-201ENST00000265081 IGHV3OR15-7A0A075B7D8 119 aa9.18□□□□□ -0.94
MSH3-201ENST00000265081 C15orf61A6NNL5 157 aa9.18□□□□□ -0.94
MSH3-201ENST00000265081 GFRA3O60609 400 aa9.18□□□□□ -0.94
MSH3-201ENST00000265081 AKR1C3P42330 323 aa9.18□□□□□ -0.94
MSH3-201ENST00000265081 BSXQ3C1V8 233 aa9.18□□□□□ -0.94
MSH3-201ENST00000265081 SLC25A48Q6ZT89 311 aaKnown RBP9.18□□□□□ -0.94
MSH3-201ENST00000265081 MAP1LC3B2A6NCE7 125 aa9.18□□□□□ -0.94
MSH3-201ENST00000265081 TMEM250H0YL14 139 aa9.18□□□□□ -0.94
MSH3-201ENST00000265081 OR10P1Q8NGE3 313 aa9.18□□□□□ -0.94
MSH3-201ENST00000265081 MAP1LC3BQ9GZQ8 125 aa9.18□□□□□ -0.94
MSH3-201ENST00000265081 MANBALQ9NQG1 85 aa9.18□□□□□ -0.94
MSH3-201ENST00000265081 M0R036 132 aa9.18□□□□□ -0.94
MSH3-201ENST00000265081 TFF3Q07654 80 aa9.18□□□□□ -0.94
MSH3-201ENST00000265081 FAM27E3Q08E93 113 aa9.18□□□□□ -0.94
MSH3-201ENST00000265081 KIAA2026Q5HYC2 2103 aa9.18□□□□□ -0.94
MSH3-201ENST00000265081 AKAP13Q12802 2813 aa9.17□□□□□ -0.94
MSH3-201ENST00000265081 INS-IGF2F8WCM5 200 aa9.17□□□□□ -0.94
MSH3-201ENST00000265081 DAOP14920 347 aa9.17□□□□□ -0.94
MSH3-201ENST00000265081 NQO2P16083 231 aa9.17□□□□□ -0.94
MSH3-201ENST00000265081 THBS3P49746 956 aa9.17□□□□□ -0.94
MSH3-201ENST00000265081 RPL39P5Q59GN2 51 aa9.17□□□□□ -0.94
MSH3-201ENST00000265081 RFESDQ8TAC1 157 aa9.17□□□□□ -0.94
MSH3-201ENST00000265081 ISOC2Q96AB3 205 aa9.17□□□□□ -0.94
MSH3-201ENST00000265081 ADTRPQ96IZ2 230 aa9.17□□□□□ -0.94
MSH3-201ENST00000265081 IDI2-AS1Q9NZ38 188 aa9.17□□□□□ -0.94
MSH3-201ENST00000265081 HCFC1P51610 2035 aa9.17□□□□□ -0.94
MSH3-201ENST00000265081 SAA2-SAA4A0A096LPE2 208 aa9.17□□□□□ -0.94
MSH3-201ENST00000265081 DEFB108AA8MXU0 73 aa9.17□□□□□ -0.94
MSH3-201ENST00000265081 C1orf196B1AJZ1 125 aa9.17□□□□□ -0.94
MSH3-201ENST00000265081 SAA2P0DJI9 122 aaPredicted RBP9.17□□□□□ -0.94
MSH3-201ENST00000265081 OR2B11Q5JQS5 317 aa9.17□□□□□ -0.94
MSH3-201ENST00000265081 ZNF833PQ6ZTB9 187 aa9.17□□□□□ -0.94
MSH3-201ENST00000265081 NIPSNAP3BQ9BS92 247 aa9.17□□□□□ -0.94
MSH3-201ENST00000265081 C20orf24Q9BUV8 137 aa9.17□□□□□ -0.94
MSH3-201ENST00000265081 OR2C1O95371 312 aa9.17□□□□□ -0.94
MSH3-201ENST00000265081 CYB5R3P00387 301 aaPredicted RBP9.17□□□□□ -0.94
MSH3-201ENST00000265081 TNFAIP6P98066 277 aaPredicted RBP9.17□□□□□ -0.94
MSH3-201ENST00000265081 ADIPOQQ15848 244 aa9.17□□□□□ -0.94
MSH3-201ENST00000265081 FAM71F2Q6NXP2 309 aa9.17□□□□□ -0.94
MSH3-201ENST00000265081 DUX4L9Q6RFH8 374 aaPredicted RBP9.17□□□□□ -0.94
MSH3-201ENST00000265081 FAM180AQ6UWF9 173 aa9.17□□□□□ -0.94
MSH3-201ENST00000265081 SAV1Q9H4B6 383 aaPredicted RBP9.17□□□□□ -0.94
MSH3-201ENST00000265081 FSTL3O95633 263 aa9.16□□□□□ -0.94
MSH3-201ENST00000265081 OPRK1P41145 380 aa9.16□□□□□ -0.94
MSH3-201ENST00000265081 MEF2CQ06413 473 aaPredicted RBP9.16□□□□□ -0.94
MSH3-201ENST00000265081 EDDM3AQ14507 147 aa9.16□□□□□ -0.94
MSH3-201ENST00000265081 OR13D1Q8NGV5 346 aa9.16□□□□□ -0.94
MSH3-201ENST00000265081 OR4S2Q8NH73 311 aa9.16□□□□□ -0.94
MSH3-201ENST00000265081 Q8WTZ3 238 aa9.16□□□□□ -0.94
MSH3-201ENST00000265081 PYGO2Q9BRQ0 406 aa9.16□□□□□ -0.94
MSH3-201ENST00000265081 GNG13Q9P2W3 67 aa9.16□□□□□ -0.94
MSH3-201ENST00000265081 RPUSD1Q9UJJ7 312 aaKnown RBP9.16□□□□□ -0.94
MSH3-201ENST00000265081 ZNF257Q9Y2Q1 563 aa9.16□□□□□ -0.94
MSH3-201ENST00000265081 LINC00312Q9Y6C7 94 aa9.16□□□□□ -0.94
MSH3-201ENST00000265081 DYSFO75923 2080 aa9.16□□□□□ -0.94
MSH3-201ENST00000265081 A0A1W2PPE3 182 aa9.16□□□□□ -0.94
MSH3-201ENST00000265081 SPRY3O43610 288 aa9.16□□□□□ -0.94
MSH3-201ENST00000265081 FGF7P21781 194 aa9.16□□□□□ -0.94
MSH3-201ENST00000265081 CYP2G1PQ6ZSU1 146 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms