RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 PF4P02776 101 aa12.98□□□□□ -0.33
NID1-201ENST00000264187 C4AP0C0L4 1744 aa12.97□□□□□ -0.33
NID1-201ENST00000264187 A0A0U1RQV5 110 aa12.97□□□□□ -0.33
NID1-201ENST00000264187 A0A1W2PPV9 198 aa12.97□□□□□ -0.33
NID1-201ENST00000264187 S1PR2O95136 353 aa12.97□□□□□ -0.33
NID1-201ENST00000264187 TRGC1P0CF51 173 aa12.97□□□□□ -0.33
NID1-201ENST00000264187 WBP1LQ9NX94 342 aa12.97□□□□□ -0.33
NID1-201ENST00000264187 A0A1B0GWB2 263 aa12.97□□□□□ -0.33
NID1-201ENST00000264187 OR11H12B2RN74 326 aa12.97□□□□□ -0.33
NID1-201ENST00000264187 CBLN1P23435 193 aa12.97□□□□□ -0.33
NID1-201ENST00000264187 SFTA2Q6UW10 78 aa12.97□□□□□ -0.33
NID1-201ENST00000264187 SELENOHQ8IZQ5 122 aaKnown RBP12.97□□□□□ -0.33
NID1-201ENST00000264187 OR11H1Q8NG94 326 aa12.97□□□□□ -0.33
NID1-201ENST00000264187 OR11H2Q8NH07 326 aa12.97□□□□□ -0.33
NID1-201ENST00000264187 MBD3L1Q8WWY6 194 aa12.97□□□□□ -0.33
NID1-201ENST00000264187 PPIAL4CA0A0B4J2A2 164 aa12.97□□□□□ -0.33
NID1-201ENST00000264187 CXorf51AA0A1B0GTR3 108 aa12.97□□□□□ -0.33
NID1-201ENST00000264187 A1L4Q6 167 aa12.97□□□□□ -0.33
NID1-201ENST00000264187 CEACAM4O75871 244 aa12.97□□□□□ -0.33
NID1-201ENST00000264187 PPIAL4GP0DN37 164 aa12.97□□□□□ -0.33
NID1-201ENST00000264187 GCSAMQ8N6F7 178 aa12.97□□□□□ -0.33
NID1-201ENST00000264187 APCDD1LQ8NCL9 501 aa12.97□□□□□ -0.33
NID1-201ENST00000264187 IRF3Q14653 427 aa12.97□□□□□ -0.33
NID1-201ENST00000264187 C10orf128Q5T292 105 aa12.97□□□□□ -0.33
NID1-201ENST00000264187 IDI2-AS1Q9NZ38 188 aa12.97□□□□□ -0.33
NID1-201ENST00000264187 IGHV3OR16-8A0A075B7F1 116 aa12.96□□□□□ -0.33
NID1-201ENST00000264187 FAM27BQ5VT28 67 aa12.96□□□□□ -0.33
NID1-201ENST00000264187 OR51G1Q8NGK1 321 aa12.96□□□□□ -0.33
NID1-201ENST00000264187 DNASE2BQ8WZ79 361 aa12.96□□□□□ -0.33
NID1-201ENST00000264187 NPIPB3Q92617 1050 aa12.96□□□□□ -0.33
NID1-201ENST00000264187 TRAV12-3A0A0B4J271 114 aa12.96□□□□□ -0.33
NID1-201ENST00000264187 NKX2-8O15522 239 aa12.96□□□□□ -0.33
NID1-201ENST00000264187 APOMO95445 188 aa12.96□□□□□ -0.33
NID1-201ENST00000264187 TGIF1Q15583 401 aa12.96□□□□□ -0.33
NID1-201ENST00000264187 SNAI3Q3KNW1 292 aa12.96□□□□□ -0.33
NID1-201ENST00000264187 C17orf51A8MQB3 221 aa12.96□□□□□ -0.33
NID1-201ENST00000264187 FOXS1O43638 330 aa12.96□□□□□ -0.33
NID1-201ENST00000264187 HOXD4P09016 255 aaPredicted RBP12.96□□□□□ -0.33
NID1-201ENST00000264187 IFITM3Q01628 133 aa12.96□□□□□ -0.33
NID1-201ENST00000264187 FAM214BQ7L5A3 538 aa12.96□□□□□ -0.33
NID1-201ENST00000264187 OR5AN1Q8NGI8 311 aa12.96□□□□□ -0.33
NID1-201ENST00000264187 KCNE5Q9UJ90 142 aa12.96□□□□□ -0.33
NID1-201ENST00000264187 NPPCP23582 126 aa12.96□□□□□ -0.34
NID1-201ENST00000264187 PEBP1P30086 187 aaKnown RBP12.96□□□□□ -0.34
NID1-201ENST00000264187 RPS20P60866 119 aaKnown RBP12.96□□□□□ -0.34
NID1-201ENST00000264187 TRAV24A0A0B4J272 114 aa12.96□□□□□ -0.34
NID1-201ENST00000264187 MARCH11A6NNE9 402 aa12.96□□□□□ -0.34
NID1-201ENST00000264187 RNASEH2CQ8TDP1 164 aaKnown RBP12.96□□□□□ -0.34
NID1-201ENST00000264187 JKAMPQ9P055 326 aa12.96□□□□□ -0.34
NID1-201ENST00000264187 HLA-DQB1P01920 261 aa12.95□□□□□ -0.34
NID1-201ENST00000264187 RGPD2P0DJD1 1756 aa12.95□□□□□ -0.34
NID1-201ENST00000264187 CD160O95971 181 aa12.95□□□□□ -0.34
NID1-201ENST00000264187 VAX1Q5SQQ9 334 aa12.95□□□□□ -0.34
NID1-201ENST00000264187 SHISA5Q8N114 240 aa12.95□□□□□ -0.34
NID1-201ENST00000264187 ZNF414Q96IQ9 312 aa12.95□□□□□ -0.34
NID1-201ENST00000264187 NUP98P52948 1817 aa12.95□□□□□ -0.34
NID1-201ENST00000264187 CFDP00746 253 aaPredicted RBP12.95□□□□□ -0.34
NID1-201ENST00000264187 SPSB4Q96A44 273 aa12.95□□□□□ -0.34
NID1-201ENST00000264187 SSC5DA1L4H1 1573 aa12.95□□□□□ -0.34
NID1-201ENST00000264187 ODAMA1E959 279 aa12.95□□□□□ -0.34
NID1-201ENST00000264187 PTP4A3O75365 173 aa12.95□□□□□ -0.34
NID1-201ENST00000264187 FCARP24071 287 aa12.95□□□□□ -0.34
NID1-201ENST00000264187 SMDT1Q9H4I9 107 aa12.95□□□□□ -0.34
NID1-201ENST00000264187 GPR132Q9UNW8 380 aa12.95□□□□□ -0.34
NID1-201ENST00000264187 DLL3Q9NYJ7 618 aa12.95□□□□□ -0.34
NID1-201ENST00000264187 MEF2CQ06413 473 aaPredicted RBP12.94□□□□□ -0.34
NID1-201ENST00000264187 TNFRSF9Q07011 255 aa12.94□□□□□ -0.34
NID1-201ENST00000264187 PNKDQ8N490 385 aa12.94□□□□□ -0.34
NID1-201ENST00000264187 GLIPR1P48060 266 aa12.94□□□□□ -0.34
NID1-201ENST00000264187 HSPE1P61604 102 aaKnown RBP12.94□□□□□ -0.34
NID1-201ENST00000264187 TMEM101Q96IK0 257 aa12.94□□□□□ -0.34
NID1-201ENST00000264187 TNFRSF18Q9Y5U5 241 aa12.94□□□□□ -0.34
NID1-201ENST00000264187 C5P01031 1676 aa12.94□□□□□ -0.34
NID1-201ENST00000264187 TRBV7-9A0A0J9YWB2 115 aa12.94□□□□□ -0.34
NID1-201ENST00000264187 TSPOP30536 169 aa12.94□□□□□ -0.34
NID1-201ENST00000264187 SNRPD3P62318 126 aaKnown RBP12.94□□□□□ -0.34
NID1-201ENST00000264187 NABP2Q9BQ15 211 aa12.94□□□□□ -0.34
NID1-201ENST00000264187 CD1AP06126 327 aa12.94□□□□□ -0.34
NID1-201ENST00000264187 CENPWQ5EE01 88 aa12.94□□□□□ -0.34
NID1-201ENST00000264187 ITLN2Q8WWU7 325 aaPredicted RBP12.94□□□□□ -0.34
NID1-201ENST00000264187 PRELID3AQ96N28 172 aa12.94□□□□□ -0.34
NID1-201ENST00000264187 TUBA4BQ9H853 241 aa12.94□□□□□ -0.34
NID1-201ENST00000264187 ATG2BQ96BY7 2078 aa12.94□□□□□ -0.34
NID1-201ENST00000264187 ICAM4Q14773 271 aa12.93□□□□□ -0.34
NID1-201ENST00000264187 ATP5J2P56134 94 aa12.93□□□□□ -0.34
NID1-201ENST00000264187 RPS11P62280 158 aaKnown RBP eCLIP12.93□□□□□ -0.34
NID1-201ENST00000264187 LINC00305Q7Z4B0 112 aa12.93□□□□□ -0.34
NID1-201ENST00000264187 ALX4Q9H161 411 aaPredicted RBP12.93□□□□□ -0.34
NID1-201ENST00000264187 ISXQ2M1V0 245 aa12.93□□□□□ -0.34
NID1-201ENST00000264187 DMRTA1Q5VZB9 504 aa12.93□□□□□ -0.34
NID1-201ENST00000264187 PCSK4Q6UW60 755 aa12.93□□□□□ -0.34
NID1-201ENST00000264187 PIMREGQ9BSJ6 248 aa12.93□□□□□ -0.34
NID1-201ENST00000264187 LNP1A1A4G5 178 aa12.93□□□□□ -0.34
NID1-201ENST00000264187 C7orf66A4D0T2 115 aa12.93□□□□□ -0.34
NID1-201ENST00000264187 SAA1P0DJI8 122 aaPredicted RBP12.93□□□□□ -0.34
NID1-201ENST00000264187 IMMP2LQ96T52 175 aa12.93□□□□□ -0.34
NID1-201ENST00000264187 REPIN1Q9BWE0 567 aaKnown RBP12.93□□□□□ -0.34
NID1-201ENST00000264187 NDUFA3O95167 84 aa12.92□□□□□ -0.34
NID1-201ENST00000264187 PPP1R3EQ9H7J1 279 aa12.92□□□□□ -0.34
NID1-201ENST00000264187 KDM3BQ7LBC6 1761 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms