RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 UCP1P25874 307 aa7.85□□□□□ -1.15
SNRNP40-201ENST00000263694 THBS3P49746 956 aa7.85□□□□□ -1.15
SNRNP40-201ENST00000263694 CATR1Q13166 79 aa7.85□□□□□ -1.15
SNRNP40-201ENST00000263694 IZUMO4Q1ZYL8 232 aa7.85□□□□□ -1.15
SNRNP40-201ENST00000263694 GPR157Q5UAW9 335 aa7.85□□□□□ -1.15
SNRNP40-201ENST00000263694 TMEM268Q5VZI3 342 aa7.85□□□□□ -1.15
SNRNP40-201ENST00000263694 BCL6BQ8N143 479 aaPredicted RBP7.85□□□□□ -1.15
SNRNP40-201ENST00000263694 OR11H7Q8NGC8 314 aa7.85□□□□□ -1.15
SNRNP40-201ENST00000263694 CHAC2Q8WUX2 184 aa7.85□□□□□ -1.15
SNRNP40-201ENST00000263694 C22orf15Q8WYQ4 148 aa7.85□□□□□ -1.15
SNRNP40-201ENST00000263694 PHB2Q99623 299 aa7.85□□□□□ -1.15
SNRNP40-201ENST00000263694 MED28Q9H204 178 aa7.85□□□□□ -1.15
SNRNP40-201ENST00000263694 LIN7CQ9NUP9 197 aaKnown RBP7.85□□□□□ -1.15
SNRNP40-201ENST00000263694 H7C2Y5 167 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 J3QLI3 93 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 GOSR2O14653 212 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 TIMM23O14925 209 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 CDS2O95674 445 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 CRYZL1O95825 349 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 SERPINE2P07093 398 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 ANXA3P12429 323 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 RRAS2P62070 204 aaPredicted RBP7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 CD300CQ08708 224 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 FAM120AOSQ5T036 256 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 FAM219AQ8IW50 185 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 VKORC1L1Q8N0U8 176 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 SLC35G3Q8N808 338 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 COQ8AQ8NI60 647 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 C18orf12Q96KH6 178 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 TMEM56Q96MV1 263 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 YAE1D1Q9NRH1 226 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 SLC35D1Q9NTN3 355 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 MGAT4CQ9UBM8 478 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 PRELID3BQ9Y3B1 194 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 TMEM56-RWDD3S4R434 201 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 HIVEP1P15822 2718 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 A0A0G2JRQ6 117 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 MDFIC2A0A1B0GVS7 189 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 DBX1A6NMT0 343 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 SRRM4A7MD48 611 aaKnown RBP7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 FAM25EA8MYX2 175 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 CD5LO43866 347 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 KRASP01116 189 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 G6PCP35575 357 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 CEACAM3P40198 252 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 HNF4GQ14541 408 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 MIDNQ504T8 468 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 MINOS1Q5TGZ0 78 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 FAM71F2Q6NXP2 309 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 SSX9Q7RTT3 188 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 ZNF695Q8IW36 515 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 LGI3Q8N145 548 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 OR5AN1Q8NGI8 311 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 SEC22AQ96IW7 307 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 ADTRPQ96IZ2 230 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 CHIAQ9BZP6 476 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 TBL2Q9Y4P3 447 aaKnown RBP7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 MINOS1-NBL1R4GNA1 71 aa7.84□□□□□ -1.15
SNRNP40-201ENST00000263694 PLXNB1O43157 2135 aa7.83□□□□□ -1.16
SNRNP40-201ENST00000263694 C13orf42A0A1B0GVH6 325 aa7.83□□□□□ -1.16
SNRNP40-201ENST00000263694 HMX3A6NHT5 357 aa7.83□□□□□ -1.16
SNRNP40-201ENST00000263694 FSHBP01225 129 aa7.83□□□□□ -1.16
SNRNP40-201ENST00000263694 IGKV1-5P01602 117 aa7.83□□□□□ -1.16
SNRNP40-201ENST00000263694 SULT1A3P0DMM9 295 aa7.83□□□□□ -1.16
SNRNP40-201ENST00000263694 SULT1A4P0DMN0 295 aa7.83□□□□□ -1.16
SNRNP40-201ENST00000263694 CNTFRP26992 372 aa7.83□□□□□ -1.16
SNRNP40-201ENST00000263694 H2BFSP57053 126 aa7.83□□□□□ -1.16
SNRNP40-201ENST00000263694 TAGLNQ01995 201 aaKnown RBP7.83□□□□□ -1.16
SNRNP40-201ENST00000263694 GGNBP1Q5YKI7 109 aa7.83□□□□□ -1.16
SNRNP40-201ENST00000263694 C11orf88Q6PI97 169 aa7.83□□□□□ -1.16
SNRNP40-201ENST00000263694 Q71RC1 249 aaPredicted RBP7.83□□□□□ -1.16
SNRNP40-201ENST00000263694 CFHR4Q92496 578 aa7.83□□□□□ -1.16
SNRNP40-201ENST00000263694 RBPMSQ93062 196 aaKnown RBP7.83□□□□□ -1.16
SNRNP40-201ENST00000263694 MALSU1Q96EH3 234 aa7.83□□□□□ -1.16
SNRNP40-201ENST00000263694 OR10C1Q96KK4 312 aa7.83□□□□□ -1.16
SNRNP40-201ENST00000263694 TNCP24821 2201 aa7.83□□□□□ -1.16
SNRNP40-201ENST00000263694 MXRA5Q9NR99 2828 aa7.82□□□□□ -1.16
SNRNP40-201ENST00000263694 A0A0B4J2A0 478 aa7.82□□□□□ -1.16
SNRNP40-201ENST00000263694 LY6G6DO95868 133 aa7.82□□□□□ -1.16
SNRNP40-201ENST00000263694 HPRT1P00492 218 aa7.82□□□□□ -1.16
SNRNP40-201ENST00000263694 APOA2P02652 100 aa7.82□□□□□ -1.16
SNRNP40-201ENST00000263694 KIR2DS2P43631 304 aa7.82□□□□□ -1.16
SNRNP40-201ENST00000263694 RPS16P62249 146 aaKnown RBP7.82□□□□□ -1.16
SNRNP40-201ENST00000263694 CD83Q01151 205 aa7.82□□□□□ -1.16
SNRNP40-201ENST00000263694 RTL8BQ17RB0 113 aa7.82□□□□□ -1.16
SNRNP40-201ENST00000263694 Q6ZRM9 215 aa7.82□□□□□ -1.16
SNRNP40-201ENST00000263694 LRTM2Q8N967 370 aa7.82□□□□□ -1.16
SNRNP40-201ENST00000263694 OR4S2Q8NH73 311 aa7.82□□□□□ -1.16
SNRNP40-201ENST00000263694 NANPQ8TBE9 248 aa7.82□□□□□ -1.16
SNRNP40-201ENST00000263694 GPR146Q96CH1 333 aa7.82□□□□□ -1.16
SNRNP40-201ENST00000263694 R3HDM4Q96D70 268 aa7.82□□□□□ -1.16
SNRNP40-201ENST00000263694 SHPKQ9UHJ6 478 aa7.82□□□□□ -1.16
SNRNP40-201ENST00000263694 WASHC3Q9Y3C0 194 aa7.82□□□□□ -1.16
SNRNP40-201ENST00000263694 TET2Q6N021 2002 aaPredicted RBP7.82□□□□□ -1.16
SNRNP40-201ENST00000263694 MTORP42345 2549 aa7.82□□□□□ -1.16
SNRNP40-201ENST00000263694 NAV3Q8IVL0 2385 aa7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 TRAV3A0A0B4J244 114 aa7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 C5orf51A6NDU8 294 aa7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 J3QL48 77 aa7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 SHOXO15266 292 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms