RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 VHLLQ6RSH7 139 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 SSMEM1Q8WWF3 244 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 NAT8Q9UHE5 227 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 SVEP1Q4LDE5 3571 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 TRAV1-1A0A0B4J248 108 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 TIMM8AO60220 97 aaPredicted RBP7.63□□□□□ -1.19
MSH4-201ENST00000263187 IFNA10P01566 189 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 GYPAP02724 150 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 COX5BP10606 129 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 NPPCP23582 126 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 THBS3P49746 956 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 CCL11P51671 97 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 SERF2P84101 59 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 SRSF7Q16629 238 aaKnown RBP eCLIP7.63□□□□□ -1.19
MSH4-201ENST00000263187 FAM201AQ5SY85 155 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 DPPA3Q6W0C5 159 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 TCF23Q7RTU1 214 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 COQ2Q96H96 371 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 NPCDR1Q9BY65 106 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 PKIBQ9C010 78 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 POLDIP2Q9Y2S7 368 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 TRAV3A0A0B4J244 114 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 C11orf94C9JXX5 98 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 NDUFB4O95168 129 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 AMBPP02760 352 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 C1QTNF9P0C862 333 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 SLC25A6P12236 298 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 PMS2P11Q13670 270 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 RPL39P5Q59GN2 51 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 VWA1Q6PCB0 445 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 TMEM14EPQ6UXP3 125 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 ZNF600Q6ZNG1 722 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 ABHD12Q8N2K0 398 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 ZNF645Q8N7E2 425 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 ZNF114Q8NC26 417 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 OPA3Q9H6K4 179 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.63□□□□□ -1.19
MSH4-201ENST00000263187 MRPS18CQ9Y3D5 142 aaKnown RBP7.63□□□□□ -1.19
MSH4-201ENST00000263187 TMEM30CPA0ZSE6 113 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 B4DEV8 164 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 KLRC4-KLRK1H3BQV0 150 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 KBTBD11O94819 623 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 MYOD1P15172 320 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 ACP1P24666 158 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 SOX8P57073 446 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 PNRC1Q12796 327 aaPredicted RBP7.63□□□□□ -1.19
MSH4-201ENST00000263187 ASPHD1Q5U4P2 390 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 NANOS1Q8WY41 292 aaKnown RBP7.63□□□□□ -1.19
MSH4-201ENST00000263187 PSMG3Q9BT73 122 aaPredicted RBP7.63□□□□□ -1.19
MSH4-201ENST00000263187 GNG12Q9UBI6 72 aa7.63□□□□□ -1.19
MSH4-201ENST00000263187 ZFHX2Q9C0A1 2572 aaPredicted RBP7.62□□□□□ -1.19
MSH4-201ENST00000263187 SPINK4O60575 86 aa7.62□□□□□ -1.19
MSH4-201ENST00000263187 OR9G9P0C7N8 305 aa7.62□□□□□ -1.19
MSH4-201ENST00000263187 DDTP30046 118 aa7.62□□□□□ -1.19
MSH4-201ENST00000263187 ERVK11-1P61568 191 aa7.62□□□□□ -1.19
MSH4-201ENST00000263187 MSMO1Q15800 293 aa7.62□□□□□ -1.19
MSH4-201ENST00000263187 ZNF766Q5HY98 468 aa7.62□□□□□ -1.19
MSH4-201ENST00000263187 DMRTC2Q8IXT2 367 aaPredicted RBP7.62□□□□□ -1.19
MSH4-201ENST00000263187 PINX1Q96BK5 328 aaKnown RBP7.62□□□□□ -1.19
MSH4-201ENST00000263187 FAM122AQ96E09 287 aa7.62□□□□□ -1.19
MSH4-201ENST00000263187 GP6Q9HCN6 339 aa7.62□□□□□ -1.19
MSH4-201ENST00000263187 TNRC6AQ8NDV7 1962 aaKnown RBP7.62□□□□□ -1.19
MSH4-201ENST00000263187 TRBV6-6A0A0A6YYG2 114 aa7.62□□□□□ -1.19
MSH4-201ENST00000263187 MARCH11A6NNE9 402 aa7.62□□□□□ -1.19
MSH4-201ENST00000263187 PFN1P07737 140 aaKnown RBP7.62□□□□□ -1.19
MSH4-201ENST00000263187 SELLP14151 372 aa7.62□□□□□ -1.19
MSH4-201ENST00000263187 NDUFB7P17568 137 aa7.62□□□□□ -1.19
MSH4-201ENST00000263187 RND2P52198 227 aa7.62□□□□□ -1.19
MSH4-201ENST00000263187 MRPL49Q13405 166 aaKnown RBP7.62□□□□□ -1.19
MSH4-201ENST00000263187 SPRNQ5BIV9 151 aa7.62□□□□□ -1.19
MSH4-201ENST00000263187 LINC00596Q86U02 117 aa7.62□□□□□ -1.19
MSH4-201ENST00000263187 MRPL41Q8IXM3 137 aaKnown RBP7.62□□□□□ -1.19
MSH4-201ENST00000263187 SPOCK3Q9BQ16 436 aa7.62□□□□□ -1.19
MSH4-201ENST00000263187 ACTR3CQ9C0K3 210 aaPredicted RBP7.62□□□□□ -1.19
MSH4-201ENST00000263187 HSPB7Q9UBY9 170 aa7.62□□□□□ -1.19
MSH4-201ENST00000263187 ZNF320A2RRD8 509 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 GRIFINA4D1Z8 144 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 CD46P15529 392 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 COX5AP20674 150 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 FOXF2Q12947 444 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 ZNRF1Q8ND25 227 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 OR2Z1Q8NG97 314 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 OR1P1Q8NH06 330 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 TMEM147Q9BVK8 224 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 HEYLQ9NQ87 328 aaPredicted RBP7.61□□□□□ -1.19
MSH4-201ENST00000263187 MBNL3Q9NUK0 354 aaKnown RBP7.61□□□□□ -1.19
MSH4-201ENST00000263187 CTXND1A0A1B0GTU2 59 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 A0A1W2PPV4 95 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 AQP7O14520 342 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 RRHO14718 337 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 NKX2-8O15522 239 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 GZMBP10144 247 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 CDC34P49427 236 aaPredicted RBP7.61□□□□□ -1.19
MSH4-201ENST00000263187 ZNF146Q15072 292 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 MIC13Q5XKP0 118 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 CYP2G1PQ6ZSU1 146 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 DEFB108BQ8NET1 73 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 PITPNC1Q9UKF7 332 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 KLF13Q9Y2Y9 288 aaPredicted RBP7.61□□□□□ -1.19
MSH4-201ENST00000263187 NBASA2RRP1 2371 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms