RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 ACOT7LQ6ZUV0 252 aa18.6■□□□□ 0.57
SMARCB1-201ENST00000263121 OR11H6Q8NGC7 330 aa18.6■□□□□ 0.57
SMARCB1-201ENST00000263121 OR4P4Q8NGL7 312 aa18.6■□□□□ 0.57
SMARCB1-201ENST00000263121 NABP2Q9BQ15 211 aa18.6■□□□□ 0.57
SMARCB1-201ENST00000263121 SIRPDQ9H106 197 aa18.6■□□□□ 0.57
SMARCB1-201ENST00000263121 BEX4Q9NWD9 120 aaPredicted RBP18.6■□□□□ 0.57
SMARCB1-201ENST00000263121 RCL1Q9Y2P8 373 aaKnown RBP18.6■□□□□ 0.57
SMARCB1-201ENST00000263121 TACC2O95359 2948 aa18.59■□□□□ 0.57
SMARCB1-201ENST00000263121 BUB1B-PAK6H3BSN5 160 aa18.59■□□□□ 0.57
SMARCB1-201ENST00000263121 OR2F2O95006 317 aa18.59■□□□□ 0.57
SMARCB1-201ENST00000263121 OR2F1Q13607 317 aa18.59■□□□□ 0.57
SMARCB1-201ENST00000263121 MIDNQ504T8 468 aa18.59■□□□□ 0.57
SMARCB1-201ENST00000263121 HCP5Q6MZN7 132 aa18.59■□□□□ 0.57
SMARCB1-201ENST00000263121 TMUB2Q71RG4 321 aa18.59■□□□□ 0.57
SMARCB1-201ENST00000263121 OR5AN1Q8NGI8 311 aa18.59■□□□□ 0.57
SMARCB1-201ENST00000263121 C11orf1Q9H5F2 150 aa18.59■□□□□ 0.57
SMARCB1-201ENST00000263121 SLC35D1Q9NTN3 355 aa18.59■□□□□ 0.57
SMARCB1-201ENST00000263121 ARID1AO14497 2285 aa18.58■□□□□ 0.57
SMARCB1-201ENST00000263121 CRYZL1O95825 349 aa18.58■□□□□ 0.57
SMARCB1-201ENST00000263121 S100A11P31949 105 aa18.58■□□□□ 0.57
SMARCB1-201ENST00000263121 REG1BP48304 166 aa18.58■□□□□ 0.57
SMARCB1-201ENST00000263121 TAGLNQ01995 201 aaKnown RBP18.58■□□□□ 0.57
SMARCB1-201ENST00000263121 DHRS7BQ6IAN0 325 aaPredicted RBP18.58■□□□□ 0.57
SMARCB1-201ENST00000263121 KCNRGQ8N5I3 272 aa18.58■□□□□ 0.57
SMARCB1-201ENST00000263121 DMBX1Q8NFW5 382 aa18.58■□□□□ 0.57
SMARCB1-201ENST00000263121 HEXA-AS1Q9H8Q6 139 aa18.58■□□□□ 0.57
SMARCB1-201ENST00000263121 AMMECR1Q9Y4X0 333 aaPredicted RBP18.58■□□□□ 0.57
SMARCB1-201ENST00000263121 A0A0D9SG52 128 aa18.57■□□□□ 0.56
SMARCB1-201ENST00000263121 H0YJW9 148 aa18.57■□□□□ 0.56
SMARCB1-201ENST00000263121 KCNAB3O43448 404 aa18.57■□□□□ 0.56
SMARCB1-201ENST00000263121 NQO2P16083 231 aa18.57■□□□□ 0.56
SMARCB1-201ENST00000263121 OPCMLQ14982 345 aa18.57■□□□□ 0.56
SMARCB1-201ENST00000263121 RTL8BQ17RB0 113 aa18.57■□□□□ 0.56
SMARCB1-201ENST00000263121 CLEC12BQ2HXU8 276 aa18.57■□□□□ 0.56
SMARCB1-201ENST00000263121 H2BFWTQ7Z2G1 175 aa18.57■□□□□ 0.56
SMARCB1-201ENST00000263121 VMO1Q7Z5L0 202 aa18.57■□□□□ 0.56
SMARCB1-201ENST00000263121 TGIF2LXQ8IUE1 241 aa18.57■□□□□ 0.56
SMARCB1-201ENST00000263121 INO80EQ8NBZ0 244 aaPredicted RBP18.57■□□□□ 0.56
SMARCB1-201ENST00000263121 PCGF1Q9BSM1 259 aa18.57■□□□□ 0.56
SMARCB1-201ENST00000263121 GON7Q9BXV9 100 aa18.57■□□□□ 0.56
SMARCB1-201ENST00000263121 E5RGE8 158 aa18.57■□□□□ 0.56
SMARCB1-201ENST00000263121 RRASP10301 218 aa18.57■□□□□ 0.56
SMARCB1-201ENST00000263121 MMP9P14780 707 aa18.57■□□□□ 0.56
SMARCB1-201ENST00000263121 C4BPBP20851 252 aa18.57■□□□□ 0.56
SMARCB1-201ENST00000263121 POLR2GP62487 172 aaKnown RBP eCLIP18.57■□□□□ 0.56
SMARCB1-201ENST00000263121 AQP10Q96PS8 301 aa18.57■□□□□ 0.56
SMARCB1-201ENST00000263121 ARL6Q9H0F7 186 aa18.57■□□□□ 0.56
SMARCB1-201ENST00000263121 NSG2Q9Y328 171 aa18.57■□□□□ 0.56
SMARCB1-201ENST00000263121 SPG11Q96JI7 2443 aa18.56■□□□□ 0.56
SMARCB1-201ENST00000263121 MSGN1A6NI15 193 aa18.56■□□□□ 0.56
SMARCB1-201ENST00000263121 ODF3BA8MYP8 253 aa18.56■□□□□ 0.56
SMARCB1-201ENST00000263121 LY6LH3BQJ8 138 aa18.56■□□□□ 0.56
SMARCB1-201ENST00000263121 APOA2P02652 100 aa18.56■□□□□ 0.56
SMARCB1-201ENST00000263121 SLC25A16P16260 332 aa18.56■□□□□ 0.56
SMARCB1-201ENST00000263121 AP2S1P53680 142 aaPredicted RBP18.56■□□□□ 0.56
SMARCB1-201ENST00000263121 KLRD1Q13241 179 aa18.56■□□□□ 0.56
SMARCB1-201ENST00000263121 DEFB113Q30KQ7 82 aa18.56■□□□□ 0.56
SMARCB1-201ENST00000263121 LRRC75A-AS1Q8N1F1 130 aa18.56■□□□□ 0.56
SMARCB1-201ENST00000263121 SLA2Q9H6Q3 261 aa18.56■□□□□ 0.56
SMARCB1-201ENST00000263121 FAM90A9PA6NNJ1 464 aa18.55■□□□□ 0.56
SMARCB1-201ENST00000263121 NXPH3O95157 252 aa18.55■□□□□ 0.56
SMARCB1-201ENST00000263121 IGKV1-16P04430 117 aa18.55■□□□□ 0.56
SMARCB1-201ENST00000263121 DVL1P1P54792 670 aaPredicted RBP18.55■□□□□ 0.56
SMARCB1-201ENST00000263121 ERVK-16P61578 105 aa18.55■□□□□ 0.56
SMARCB1-201ENST00000263121 POU2AF1Q16633 256 aa18.55■□□□□ 0.56
SMARCB1-201ENST00000263121 HIST2H2BCQ6DN03 193 aa18.55■□□□□ 0.56
SMARCB1-201ENST00000263121 MAGT1Q9H0U3 335 aa18.55■□□□□ 0.56
SMARCB1-201ENST00000263121 CELSR2Q9HCU4 2923 aa18.54■□□□□ 0.56
SMARCB1-201ENST00000263121 DOPEY2Q9Y3R5 2298 aa18.54■□□□□ 0.56
SMARCB1-201ENST00000263121 FAM90A26D6RGX4 464 aa18.54■□□□□ 0.56
SMARCB1-201ENST00000263121 TSC22D2O75157 780 aa18.54■□□□□ 0.56
SMARCB1-201ENST00000263121 ARG1P05089 322 aa18.54■□□□□ 0.56
SMARCB1-201ENST00000263121 HOXB4P17483 251 aaPredicted RBP18.54■□□□□ 0.56
SMARCB1-201ENST00000263121 ARHGDIBP52566 201 aa18.54■□□□□ 0.56
SMARCB1-201ENST00000263121 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.54■□□□□ 0.56
SMARCB1-201ENST00000263121 SSSCA1O60232 199 aa18.54■□□□□ 0.56
SMARCB1-201ENST00000263121 OR9G9P0C7N8 305 aa18.54■□□□□ 0.56
SMARCB1-201ENST00000263121 HKR1P10072 659 aa18.54■□□□□ 0.56
SMARCB1-201ENST00000263121 NUP62P37198 522 aaPredicted RBP18.54■□□□□ 0.56
SMARCB1-201ENST00000263121 LDLRAD2Q5SZI1 272 aa18.54■□□□□ 0.56
SMARCB1-201ENST00000263121 PDPNQ86YL7 162 aa18.54■□□□□ 0.56
SMARCB1-201ENST00000263121 VKORC1L1Q8N0U8 176 aa18.54■□□□□ 0.56
SMARCB1-201ENST00000263121 RBMXL1Q96E39 390 aaKnown RBP18.54■□□□□ 0.56
SMARCB1-201ENST00000263121 INSIG2Q9Y5U4 225 aa18.54■□□□□ 0.56
SMARCB1-201ENST00000263121 RNASEK-C17orf49H0YIS7 233 aa18.53■□□□□ 0.56
SMARCB1-201ENST00000263121 TXNL1O43396 289 aa18.53■□□□□ 0.56
SMARCB1-201ENST00000263121 TOX4O94842 621 aa18.53■□□□□ 0.56
SMARCB1-201ENST00000263121 HRASP01112 189 aa18.53■□□□□ 0.56
SMARCB1-201ENST00000263121 GAPDHP04406 335 aaKnown RBP18.53■□□□□ 0.56
SMARCB1-201ENST00000263121 P2RY1P47900 373 aa18.53■□□□□ 0.56
SMARCB1-201ENST00000263121 AARDQ4LEZ3 155 aa18.53■□□□□ 0.56
SMARCB1-201ENST00000263121 TMEM177Q53S58 311 aa18.53■□□□□ 0.56
SMARCB1-201ENST00000263121 SSX9Q7RTT3 188 aa18.53■□□□□ 0.56
SMARCB1-201ENST00000263121 RHOVQ96L33 236 aa18.53■□□□□ 0.56
SMARCB1-201ENST00000263121 TBX15Q96SF7 602 aa18.53■□□□□ 0.56
SMARCB1-201ENST00000263121 LPAR2Q9HBW0 351 aa18.53■□□□□ 0.56
SMARCB1-201ENST00000263121 TMEM140Q9NV12 185 aa18.53■□□□□ 0.56
SMARCB1-201ENST00000263121 RGS13O14921 159 aa18.52■□□□□ 0.56
SMARCB1-201ENST00000263121 PVALBP20472 110 aaPredicted RBP18.52■□□□□ 0.56
SMARCB1-201ENST00000263121 USF1P22415 310 aaPredicted RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms