RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 LDLRAD3Q86YD5 345 aa11.54□□□□□ -0.56
PDGFRB-201ENST00000261799 TMEM101Q96IK0 257 aa11.54□□□□□ -0.56
PDGFRB-201ENST00000261799 OR10C1Q96KK4 312 aa11.54□□□□□ -0.56
PDGFRB-201ENST00000261799 PTPRZ1P23471 2315 aaPredicted RBP11.54□□□□□ -0.56
PDGFRB-201ENST00000261799 WNT2P09544 360 aa11.54□□□□□ -0.56
PDGFRB-201ENST00000261799 TRAV20A0A0B4J274 112 aa11.54□□□□□ -0.56
PDGFRB-201ENST00000261799 CTXND1A0A1B0GTU2 59 aa11.54□□□□□ -0.56
PDGFRB-201ENST00000261799 PGLYRP1O75594 196 aaPredicted RBP11.54□□□□□ -0.56
PDGFRB-201ENST00000261799 HIST1H3AP68431 136 aa11.53□□□□□ -0.56
PDGFRB-201ENST00000261799 MVDP53602 400 aa11.53□□□□□ -0.56
PDGFRB-201ENST00000261799 HSPB7Q9UBY9 170 aa11.53□□□□□ -0.56
PDGFRB-201ENST00000261799 ANOS1P23352 680 aa11.53□□□□□ -0.56
PDGFRB-201ENST00000261799 NBL1P41271 181 aa11.53□□□□□ -0.56
PDGFRB-201ENST00000261799 ZNF56Q15929 161 aa11.53□□□□□ -0.56
PDGFRB-201ENST00000261799 WFIKKN1Q96NZ8 548 aa11.53□□□□□ -0.56
PDGFRB-201ENST00000261799 LINC01587Q99440 93 aa11.53□□□□□ -0.56
PDGFRB-201ENST00000261799 HSF4Q9ULV5 492 aa11.53□□□□□ -0.56
PDGFRB-201ENST00000261799 RNF114Q9Y508 228 aa11.53□□□□□ -0.56
PDGFRB-201ENST00000261799 IGKV1D-42A0A075B6H8 117 aa11.53□□□□□ -0.56
PDGFRB-201ENST00000261799 DEFA6Q01524 100 aa11.53□□□□□ -0.56
PDGFRB-201ENST00000261799 PRSS53Q2L4Q9 553 aa11.53□□□□□ -0.56
PDGFRB-201ENST00000261799 SLC35B3Q9H1N7 401 aa11.53□□□□□ -0.56
PDGFRB-201ENST00000261799 SRD5A3Q9H8P0 318 aa11.53□□□□□ -0.56
PDGFRB-201ENST00000261799 VAX2Q9UIW0 290 aa11.53□□□□□ -0.56
PDGFRB-201ENST00000261799 KCNK7Q9Y2U2 307 aa11.53□□□□□ -0.56
PDGFRB-201ENST00000261799 FBXL15Q9H469 300 aa11.53□□□□□ -0.56
PDGFRB-201ENST00000261799 IL36RNQ9UBH0 155 aa11.53□□□□□ -0.56
PDGFRB-201ENST00000261799 SPAG17Q6Q759 2223 aa11.52□□□□□ -0.56
PDGFRB-201ENST00000261799 MIA3Q5JRA6 1907 aa11.52□□□□□ -0.56
PDGFRB-201ENST00000261799 RBFOX3A6NFN3 312 aa11.52□□□□□ -0.56
PDGFRB-201ENST00000261799 KBTBD11O94819 623 aa11.52□□□□□ -0.56
PDGFRB-201ENST00000261799 PSMB2P49721 201 aa11.52□□□□□ -0.56
PDGFRB-201ENST00000261799 EMP1P54849 157 aa11.52□□□□□ -0.56
PDGFRB-201ENST00000261799 NANOS3P60323 173 aaKnown RBP11.52□□□□□ -0.56
PDGFRB-201ENST00000261799 CLEC9AQ6UXN8 241 aa11.52□□□□□ -0.56
PDGFRB-201ENST00000261799 SCGB1D4Q6XE38 83 aa11.52□□□□□ -0.56
PDGFRB-201ENST00000261799 GON4LQ3T8J9 2241 aa11.52□□□□□ -0.56
PDGFRB-201ENST00000261799 GZMMP51124 257 aa11.52□□□□□ -0.57
PDGFRB-201ENST00000261799 FAM74A3Q4VXF1 159 aa11.52□□□□□ -0.57
PDGFRB-201ENST00000261799 OR2D3Q8NGH3 330 aa11.52□□□□□ -0.57
PDGFRB-201ENST00000261799 ATG101Q9BSB4 218 aa11.52□□□□□ -0.57
PDGFRB-201ENST00000261799 KBTBD11-OT1A0A1B0GTJ5 212 aa11.52□□□□□ -0.57
PDGFRB-201ENST00000261799 CLDN34H7C241 214 aa11.52□□□□□ -0.57
PDGFRB-201ENST00000261799 PAGE4O60829 102 aa11.52□□□□□ -0.57
PDGFRB-201ENST00000261799 TCL1AP56279 114 aa11.52□□□□□ -0.57
PDGFRB-201ENST00000261799 CLEC19AQ6UXS0 136 aa11.52□□□□□ -0.57
PDGFRB-201ENST00000261799 OSR1Q8TAX0 266 aaPredicted RBP11.52□□□□□ -0.57
PDGFRB-201ENST00000261799 MRPS18AQ9NVS2 196 aaKnown RBP11.52□□□□□ -0.57
PDGFRB-201ENST00000261799 FABP4P15090 132 aa11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 SSTR5P35346 364 aa11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 FAM201AQ5SY85 155 aa11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 OR5AU1Q8NGC0 362 aa11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 KCNE5Q9UJ90 142 aa11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 BOLA1Q9Y3E2 137 aa11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 IGHV1-18A0A0C4DH31 117 aa11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 M0R2Z0 102 aa11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 PGA5P0DJD9 388 aa11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 ATP5IP56385 69 aaPredicted RBP11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 BMPERQ8N8U9 685 aa11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 CEACAM4O75871 244 aa11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 LDLRAD2Q5SZI1 272 aa11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 PSME4Q14997 1843 aa11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 TRBV5-5A0A0J9YX44 114 aa11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 SAP30O75446 220 aa11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 CELA3BP08861 270 aa11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 TMEM177Q53S58 311 aa11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 GPR82Q96P67 336 aa11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 MAP1LC3CQ9BXW4 147 aa11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 MARCH11A6NNE9 402 aa11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 KLF7O75840 302 aaPredicted RBP11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 IL4P05112 153 aa11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 TMEM222Q9H0R3 208 aa11.51□□□□□ -0.57
PDGFRB-201ENST00000261799 MED19A0JLT2 244 aaPredicted RBP11.5□□□□□ -0.57
PDGFRB-201ENST00000261799 PSMB11A5LHX3 300 aa11.5□□□□□ -0.57
PDGFRB-201ENST00000261799 NBR2O15453 112 aa11.5□□□□□ -0.57
PDGFRB-201ENST00000261799 EFNB2P52799 333 aa11.5□□□□□ -0.57
PDGFRB-201ENST00000261799 C1QTNF5Q9BXJ0 243 aa11.5□□□□□ -0.57
PDGFRB-201ENST00000261799 PRRC2BQ5JSZ5 2229 aaKnown RBP11.5□□□□□ -0.57
PDGFRB-201ENST00000261799 LILRA1O75019 489 aa11.5□□□□□ -0.57
PDGFRB-201ENST00000261799 LEPP41159 167 aa11.5□□□□□ -0.57
PDGFRB-201ENST00000261799 Q5PR19 223 aa11.5□□□□□ -0.57
PDGFRB-201ENST00000261799 VAX1Q5SQQ9 334 aa11.5□□□□□ -0.57
PDGFRB-201ENST00000261799 FAM90A26D6RGX4 464 aa11.5□□□□□ -0.57
PDGFRB-201ENST00000261799 ZNF324O75467 553 aaPredicted RBP11.5□□□□□ -0.57
PDGFRB-201ENST00000261799 Q0VFX4 171 aa11.5□□□□□ -0.57
PDGFRB-201ENST00000261799 DRAM1Q8N682 238 aa11.5□□□□□ -0.57
PDGFRB-201ENST00000261799 DNAJC4Q9NNZ3 241 aa11.5□□□□□ -0.57
PDGFRB-201ENST00000261799 DEPPQ9NTK1 212 aa11.5□□□□□ -0.57
PDGFRB-201ENST00000261799 ANKRD12Q6UB98 2062 aa11.5□□□□□ -0.57
PDGFRB-201ENST00000261799 IGKV3OR2-268A0A0C4DH90 116 aa11.5□□□□□ -0.57
PDGFRB-201ENST00000261799 A0A0G2JNJ9 132 aa11.5□□□□□ -0.57
PDGFRB-201ENST00000261799 H0YL77 283 aa11.5□□□□□ -0.57
PDGFRB-201ENST00000261799 PLAUP00749 431 aa11.5□□□□□ -0.57
PDGFRB-201ENST00000261799 Q9UFV3 132 aa11.5□□□□□ -0.57
PDGFRB-201ENST00000261799 OPN4Q9UHM6 478 aa11.5□□□□□ -0.57
PDGFRB-201ENST00000261799 IGHV3-11P01762 117 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 PRSS2P07478 247 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 PNRC1Q12796 327 aaPredicted RBP11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 PEAR1Q5VY43 1037 aaPredicted RBP11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 FGFRL1Q8N441 504 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms