RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 C2orf83Q53S99 150 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 FHL5Q5TD97 284 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 MMD2Q8IY49 270 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 WFIKKN1Q96NZ8 548 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 IGHV1-69-2A0A0G2JMI3 117 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 TCF21O43680 179 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 MOSP00540 346 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 ISG15P05161 165 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 CELA3AP09093 270 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 HINT1P49773 126 aaPredicted RBP10.35□□□□□ -0.75
COL8A1-201ENST00000261037 TAS2R60P59551 318 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 SERF2P84101 59 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 ACSF3Q4G176 576 aaPredicted RBP10.35□□□□□ -0.75
COL8A1-201ENST00000261037 RHOVQ96L33 236 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 PHLDA3Q9Y5J5 127 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 ABLIM2Q6H8Q1 611 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 PCSK4Q6UW60 755 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 TP53RKQ96S44 253 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 AKIRIN1Q9H9L7 192 aaPredicted RBP10.35□□□□□ -0.75
COL8A1-201ENST00000261037 A8MWL6 223 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 AMY1AP04745 511 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 RPL39P5Q59GN2 51 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 LOXL4Q96JB6 756 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 WDR90Q96KV7 1748 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 A1L4Q6 167 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 MARCH11A6NNE9 402 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 H0YL77 283 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 DLX6P56179 175 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 GPR61Q9BZJ8 451 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 MRPL18Q9H0U6 180 aaKnown RBP10.35□□□□□ -0.75
COL8A1-201ENST00000261037 TUBD1Q9UJT1 453 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 SIPA1L1O43166 1804 aa10.35□□□□□ -0.75
COL8A1-201ENST00000261037 LSM10Q969L4 123 aaKnown RBP10.34□□□□□ -0.75
COL8A1-201ENST00000261037 DPH3Q96FX2 82 aa10.34□□□□□ -0.75
COL8A1-201ENST00000261037 TRBV5-7A0A0A0MS05 114 aa10.34□□□□□ -0.75
COL8A1-201ENST00000261037 NUP37Q8NFH4 326 aa10.34□□□□□ -0.75
COL8A1-201ENST00000261037 SRSF12Q8WXF0 261 aaKnown RBP10.34□□□□□ -0.75
COL8A1-201ENST00000261037 F11RQ9Y624 299 aaKnown RBP10.34□□□□□ -0.75
COL8A1-201ENST00000261037 CACNA1CQ13936 2221 aa10.34□□□□□ -0.75
COL8A1-201ENST00000261037 PIN1P1O15428 100 aa10.34□□□□□ -0.75
COL8A1-201ENST00000261037 CRYBB3P26998 211 aa10.34□□□□□ -0.75
COL8A1-201ENST00000261037 TNFRSF9Q07011 255 aa10.34□□□□□ -0.75
COL8A1-201ENST00000261037 TMEM54Q969K7 222 aa10.34□□□□□ -0.75
COL8A1-201ENST00000261037 RAX2Q96IS3 184 aa10.34□□□□□ -0.75
COL8A1-201ENST00000261037 SIGLEC12Q96PQ1 595 aa10.34□□□□□ -0.75
COL8A1-201ENST00000261037 PKIBQ9C010 78 aa10.34□□□□□ -0.75
COL8A1-201ENST00000261037 C5orf66Q9H5L9 145 aa10.34□□□□□ -0.75
COL8A1-201ENST00000261037 ASCC3Q8N3C0 2202 aaKnown RBP10.34□□□□□ -0.75
COL8A1-201ENST00000261037 GPX1P07203 203 aa10.34□□□□□ -0.75
COL8A1-201ENST00000261037 RFPL3SP0C7P2 107 aa10.34□□□□□ -0.75
COL8A1-201ENST00000261037 PSG9Q00887 426 aa10.34□□□□□ -0.75
COL8A1-201ENST00000261037 OR4A47Q6IF82 309 aa10.34□□□□□ -0.75
COL8A1-201ENST00000261037 CENPVQ7Z7K6 275 aaPredicted RBP10.34□□□□□ -0.75
COL8A1-201ENST00000261037 IGHV3-49A0A0A0MS15 119 aa10.34□□□□□ -0.75
COL8A1-201ENST00000261037 LOC107984156A0A0G2JMH3 177 aa10.34□□□□□ -0.75
COL8A1-201ENST00000261037 SMIM6P0DI80 62 aa10.34□□□□□ -0.75
COL8A1-201ENST00000261037 ARL17AQ8IVW1 177 aa10.34□□□□□ -0.75
COL8A1-201ENST00000261037 ALX4Q9H161 411 aaPredicted RBP10.34□□□□□ -0.75
COL8A1-201ENST00000261037 OR51M1Q9H341 326 aa10.34□□□□□ -0.75
COL8A1-201ENST00000261037 ZNRF1Q8ND25 227 aa10.33□□□□□ -0.76
COL8A1-201ENST00000261037 FDCSPQ8NFU4 85 aa10.33□□□□□ -0.76
COL8A1-201ENST00000261037 C7orf66A4D0T2 115 aa10.33□□□□□ -0.76
COL8A1-201ENST00000261037 LCN2P80188 198 aa10.33□□□□□ -0.76
COL8A1-201ENST00000261037 ZNF56Q15929 161 aa10.33□□□□□ -0.76
COL8A1-201ENST00000261037 FAM201AQ5SY85 155 aa10.33□□□□□ -0.76
COL8A1-201ENST00000261037 RAXQ9Y2V3 346 aa10.33□□□□□ -0.76
COL8A1-201ENST00000261037 PDLIM4P50479 330 aa10.33□□□□□ -0.76
COL8A1-201ENST00000261037 FAM106AQ4KMX7 169 aa10.33□□□□□ -0.76
COL8A1-201ENST00000261037 ZNF660Q6AZW8 331 aaPredicted RBP10.33□□□□□ -0.76
COL8A1-201ENST00000261037 Q96M66 194 aa10.33□□□□□ -0.76
COL8A1-201ENST00000261037 RECKO95980 971 aa10.33□□□□□ -0.76
COL8A1-201ENST00000261037 TIMP4Q99727 224 aa10.33□□□□□ -0.76
COL8A1-201ENST00000261037 DNAJC4Q9NNZ3 241 aa10.33□□□□□ -0.76
COL8A1-201ENST00000261037 M0QZK8 103 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 GGCTO75223 188 aaKnown RBP10.32□□□□□ -0.76
COL8A1-201ENST00000261037 MEF2BQ02080 365 aaPredicted RBP10.32□□□□□ -0.76
COL8A1-201ENST00000261037 KIAA1644Q3SXP7 199 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 GPR82Q96P67 336 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 CLEC7AQ9BXN2 247 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 PCM1Q15154 2024 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 NPIPB6E9PJ23 425 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 STAG3L2P0CL84 134 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 PLXNA1Q9UIW2 1896 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 FOXI3A8MTJ6 420 aaPredicted RBP10.32□□□□□ -0.76
COL8A1-201ENST00000261037 RAMP1O60894 148 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 RELQ04864 619 aaPredicted RBP10.32□□□□□ -0.76
COL8A1-201ENST00000261037 C7orf71A4D174 169 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 HSPE1P61604 102 aaKnown RBP10.32□□□□□ -0.76
COL8A1-201ENST00000261037 PRB3Q04118 309 aaPredicted RBP10.32□□□□□ -0.76
COL8A1-201ENST00000261037 LAMTOR1Q6IAA8 161 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 SFXN3Q9BWM7 321 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 MAP1LC3AQ9H492 121 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 JPT1Q9UK76 154 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 A0A0G2JMM0 328 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 A0A1W2PPB8 328 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 A0A1W2PRS3 328 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 KIR3DP1A8MWS1 328 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 GDF9O60383 454 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 MPDU1O75352 247 aa10.32□□□□□ -0.76
COL8A1-201ENST00000261037 PF4P02776 101 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms