RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 LYRM2Q9NU23 88 aaPredicted RBP18.3■□□□□ 0.52
SIX3-201ENST00000260653 MIOXQ9UGB7 285 aa18.3■□□□□ 0.52
SIX3-201ENST00000260653 UBR5O95071 2799 aaPredicted RBP18.3■□□□□ 0.52
SIX3-201ENST00000260653 IGSF23A1L1A6 192 aa18.29■□□□□ 0.52
SIX3-201ENST00000260653 ATG12O94817 140 aa18.29■□□□□ 0.52
SIX3-201ENST00000260653 WDR25Q64LD2 544 aaPredicted RBP18.29■□□□□ 0.52
SIX3-201ENST00000260653 BAP18Q8IXM2 172 aa18.29■□□□□ 0.52
SIX3-201ENST00000260653 ZNF383Q8NA42 475 aa18.29■□□□□ 0.52
SIX3-201ENST00000260653 MARC2Q969Z3 335 aa18.29■□□□□ 0.52
SIX3-201ENST00000260653 R3HDM4Q96D70 268 aa18.29■□□□□ 0.52
SIX3-201ENST00000260653 NEIL1Q96FI4 390 aaPredicted RBP18.29■□□□□ 0.52
SIX3-201ENST00000260653 COA4Q9NYJ1 87 aa18.29■□□□□ 0.52
SIX3-201ENST00000260653 TAAR5O14804 337 aa18.29■□□□□ 0.52
SIX3-201ENST00000260653 PAX9P55771 341 aa18.29■□□□□ 0.52
SIX3-201ENST00000260653 EWSR1Q01844 656 aaKnown RBP eCLIP18.29■□□□□ 0.52
SIX3-201ENST00000260653 MIDNQ504T8 468 aa18.29■□□□□ 0.52
SIX3-201ENST00000260653 FAM208BQ5VWN6 2430 aa18.29■□□□□ 0.52
SIX3-201ENST00000260653 RBFOX2O43251 390 aaKnown RBP eCLIP18.28■□□□□ 0.52
SIX3-201ENST00000260653 HPRT1P00492 218 aa18.28■□□□□ 0.52
SIX3-201ENST00000260653 NMBP08949 121 aa18.28■□□□□ 0.52
SIX3-201ENST00000260653 IGHV1-8P0DP01 117 aa18.28■□□□□ 0.52
SIX3-201ENST00000260653 H2BFWTQ7Z2G1 175 aa18.28■□□□□ 0.52
SIX3-201ENST00000260653 PHYHIPLQ96FC7 376 aa18.28■□□□□ 0.52
SIX3-201ENST00000260653 ASH1LQ9NR48 2969 aaKnown RBP18.28■□□□□ 0.52
SIX3-201ENST00000260653 PPP1R14DQ9NXH3 145 aa18.28■□□□□ 0.52
SIX3-201ENST00000260653 RAB39BQ96DA2 213 aa18.28■□□□□ 0.52
SIX3-201ENST00000260653 ARHGAP32A7KAX9 2087 aa18.28■□□□□ 0.52
SIX3-201ENST00000260653 TOR1AO14656 332 aa18.27■□□□□ 0.52
SIX3-201ENST00000260653 SYNGR2O43760 224 aa18.27■□□□□ 0.52
SIX3-201ENST00000260653 F12P00748 615 aaPredicted RBP18.27■□□□□ 0.52
SIX3-201ENST00000260653 MMP9P14780 707 aa18.27■□□□□ 0.52
SIX3-201ENST00000260653 THBS3P49746 956 aa18.27■□□□□ 0.52
SIX3-201ENST00000260653 SSX9Q7RTT3 188 aa18.27■□□□□ 0.52
SIX3-201ENST00000260653 VKORC1L1Q8N0U8 176 aa18.27■□□□□ 0.52
SIX3-201ENST00000260653 TMEM252Q8N6L7 170 aa18.27■□□□□ 0.52
SIX3-201ENST00000260653 H3BP45 60 aa18.27■□□□□ 0.52
SIX3-201ENST00000260653 GPR37O15354 613 aa18.27■□□□□ 0.52
SIX3-201ENST00000260653 IAPPP10997 89 aa18.27■□□□□ 0.52
SIX3-201ENST00000260653 DLX1P56177 255 aa18.27■□□□□ 0.52
SIX3-201ENST00000260653 WFDC1Q9HC57 220 aa18.27■□□□□ 0.52
SIX3-201ENST00000260653 KIR2DS2P43631 304 aa18.26■□□□□ 0.51
SIX3-201ENST00000260653 NUP50Q9UKX7 468 aa18.26■□□□□ 0.51
SIX3-201ENST00000260653 PPIAL4CA0A0B4J2A2 164 aa18.26■□□□□ 0.51
SIX3-201ENST00000260653 CT45A6P0DMU7 189 aa18.26■□□□□ 0.51
SIX3-201ENST00000260653 CT45A5P0DMU8 189 aa18.26■□□□□ 0.51
SIX3-201ENST00000260653 CT45A7P0DMV0 189 aa18.26■□□□□ 0.51
SIX3-201ENST00000260653 PPIAL4GP0DN37 164 aa18.26■□□□□ 0.51
SIX3-201ENST00000260653 OR4S2Q8NH73 311 aa18.26■□□□□ 0.51
SIX3-201ENST00000260653 RAB40CQ96S21 281 aa18.26■□□□□ 0.51
SIX3-201ENST00000260653 LINC00862A6NCI5 91 aa18.25■□□□□ 0.51
SIX3-201ENST00000260653 J3QR06 171 aa18.25■□□□□ 0.51
SIX3-201ENST00000260653 EFNA4P52798 201 aa18.25■□□□□ 0.51
SIX3-201ENST00000260653 TNFRSF9Q07011 255 aa18.25■□□□□ 0.51
SIX3-201ENST00000260653 ZNF833PQ6ZTB9 187 aa18.25■□□□□ 0.51
SIX3-201ENST00000260653 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.25■□□□□ 0.51
SIX3-201ENST00000260653 OR10X1Q8NGY0 326 aa18.25■□□□□ 0.51
SIX3-201ENST00000260653 TMED6Q8WW62 240 aa18.25■□□□□ 0.51
SIX3-201ENST00000260653 ADTRPQ96IZ2 230 aa18.25■□□□□ 0.51
SIX3-201ENST00000260653 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.25■□□□□ 0.51
SIX3-201ENST00000260653 A0A087X0M5 115 aa18.25■□□□□ 0.51
SIX3-201ENST00000260653 A0A1B0GX30 115 aa18.25■□□□□ 0.51
SIX3-201ENST00000260653 C22orf46C9J442 243 aa18.25■□□□□ 0.51
SIX3-201ENST00000260653 OR9G9P0C7N8 305 aa18.25■□□□□ 0.51
SIX3-201ENST00000260653 PRB3Q04118 309 aaPredicted RBP18.25■□□□□ 0.51
SIX3-201ENST00000260653 PATZ1Q9HBE1 687 aaKnown RBP18.25■□□□□ 0.51
SIX3-201ENST00000260653 HSPB7Q9UBY9 170 aa18.25■□□□□ 0.51
SIX3-201ENST00000260653 SESN1Q9Y6P5 492 aa18.25■□□□□ 0.51
SIX3-201ENST00000260653 FAM90A26D6RGX4 464 aa18.24■□□□□ 0.51
SIX3-201ENST00000260653 CST7O76096 145 aa18.24■□□□□ 0.51
SIX3-201ENST00000260653 GAPDHP04406 335 aaKnown RBP18.24■□□□□ 0.51
SIX3-201ENST00000260653 GPR6P46095 362 aaPredicted RBP18.24■□□□□ 0.51
SIX3-201ENST00000260653 UBE2KP61086 200 aa18.24■□□□□ 0.51
SIX3-201ENST00000260653 ABHD12Q8N2K0 398 aa18.24■□□□□ 0.51
SIX3-201ENST00000260653 C8orf46Q8TAG6 207 aa18.24■□□□□ 0.51
SIX3-201ENST00000260653 CXorf58Q96LI9 332 aa18.24■□□□□ 0.51
SIX3-201ENST00000260653 TMEM133Q9H2Q1 129 aa18.24■□□□□ 0.51
SIX3-201ENST00000260653 KLF2Q9Y5W3 355 aaPredicted RBP18.24■□□□□ 0.51
SIX3-201ENST00000260653 RBMXL2O75526 392 aaKnown RBP18.24■□□□□ 0.51
SIX3-201ENST00000260653 GNB2P62879 340 aa18.24■□□□□ 0.51
SIX3-201ENST00000260653 ZNF596Q8TC21 504 aa18.24■□□□□ 0.51
SIX3-201ENST00000260653 MRPL20Q9BYC9 149 aaKnown RBP18.24■□□□□ 0.51
SIX3-201ENST00000260653 SLC25A31Q9H0C2 315 aa18.24■□□□□ 0.51
SIX3-201ENST00000260653 WSB1Q9Y6I7 421 aa18.24■□□□□ 0.51
SIX3-201ENST00000260653 SPG11Q96JI7 2443 aa18.24■□□□□ 0.51
SIX3-201ENST00000260653 JTBO76095 146 aa18.23■□□□□ 0.51
SIX3-201ENST00000260653 NQO2P16083 231 aa18.23■□□□□ 0.51
SIX3-201ENST00000260653 REG1BP48304 166 aa18.23■□□□□ 0.51
SIX3-201ENST00000260653 LINC00311Q8N616 119 aa18.23■□□□□ 0.51
SIX3-201ENST00000260653 C8orf31Q8N9H6 132 aa18.23■□□□□ 0.51
SIX3-201ENST00000260653 OR9G1Q8NH87 305 aa18.23■□□□□ 0.51
SIX3-201ENST00000260653 CITED4Q96RK1 184 aa18.23■□□□□ 0.51
SIX3-201ENST00000260653 RBKSQ9H477 322 aa18.23■□□□□ 0.51
SIX3-201ENST00000260653 CRYBG3Q68DQ2 2970 aa18.23■□□□□ 0.51
SIX3-201ENST00000260653 MED13LQ71F56 2210 aa18.23■□□□□ 0.51
SIX3-201ENST00000260653 OVOL3O00110 214 aa18.23■□□□□ 0.51
SIX3-201ENST00000260653 OR2B8PP59922 312 aa18.23■□□□□ 0.51
SIX3-201ENST00000260653 RPL23AP62750 156 aaKnown RBP18.23■□□□□ 0.51
SIX3-201ENST00000260653 DIAPH2-AS1Q14236 149 aa18.23■□□□□ 0.51
SIX3-201ENST00000260653 TMEM217Q8N7C4 229 aa18.23■□□□□ 0.51
SIX3-201ENST00000260653 ERVK-16P61578 105 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms