RNA–Protein interactions for RNA: ENST00000253458.11

GSE1-201, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GSE1, Length 7,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-201ENST00000253458 KIR3DL3Q8N743 410 aa11.16□□□□□ -0.62
GSE1-201ENST00000253458 SEC11CQ9BY50 192 aa11.16□□□□□ -0.62
GSE1-201ENST00000253458 MTFP1Q9UDX5 166 aa11.16□□□□□ -0.62
GSE1-201ENST00000253458 TMEM56-RWDD3S4R434 201 aa11.16□□□□□ -0.62
GSE1-201ENST00000253458 CACNA1IQ9P0X4 2223 aa11.15□□□□□ -0.62
GSE1-201ENST00000253458 RBFOX3A6NFN3 312 aa11.15□□□□□ -0.62
GSE1-201ENST00000253458 APCSP02743 223 aa11.15□□□□□ -0.62
GSE1-201ENST00000253458 LAMTOR1Q6IAA8 161 aa11.15□□□□□ -0.62
GSE1-201ENST00000253458 SAP25Q8TEE9 199 aa11.15□□□□□ -0.62
GSE1-201ENST00000253458 MRPS16Q9Y3D3 137 aaKnown RBP11.15□□□□□ -0.62
GSE1-201ENST00000253458 A0A1W2PQM1 296 aa11.15□□□□□ -0.62
GSE1-201ENST00000253458 C5orf67F2Z3F1 127 aa11.15□□□□□ -0.62
GSE1-201ENST00000253458 ZNF562Q6V9R5 426 aa11.15□□□□□ -0.62
GSE1-201ENST00000253458 ZNF383Q8NA42 475 aa11.15□□□□□ -0.62
GSE1-201ENST00000253458 GPR82Q96P67 336 aa11.15□□□□□ -0.62
GSE1-201ENST00000253458 SF3B5Q9BWJ5 86 aaKnown RBP11.15□□□□□ -0.62
GSE1-201ENST00000253458 DOCK11Q5JSL3 2073 aa11.15□□□□□ -0.62
GSE1-201ENST00000253458 SHANK3Q9BYB0 1731 aa11.15□□□□□ -0.62
GSE1-201ENST00000253458 CX3CL1P78423 397 aa11.15□□□□□ -0.62
GSE1-201ENST00000253458 MBNL2Q5VZF2 373 aaKnown RBP11.15□□□□□ -0.62
GSE1-201ENST00000253458 FAM168AQ92567 244 aa11.15□□□□□ -0.62
GSE1-201ENST00000253458 PKD1L3Q7Z443 1732 aa11.15□□□□□ -0.62
GSE1-201ENST00000253458 FANCMQ8IYD8 2048 aa11.15□□□□□ -0.62
GSE1-201ENST00000253458 KHDC3LQ587J8 217 aa11.15□□□□□ -0.62
GSE1-201ENST00000253458 OR2K2Q8NGT1 345 aa11.15□□□□□ -0.62
GSE1-201ENST00000253458 MRPL16Q9NX20 251 aaKnown RBP11.15□□□□□ -0.62
GSE1-201ENST00000253458 FOXI3A8MTJ6 420 aaPredicted RBP11.15□□□□□ -0.63
GSE1-201ENST00000253458 NAT1P18440 290 aa11.15□□□□□ -0.63
GSE1-201ENST00000253458 GLIPR1P48060 266 aa11.15□□□□□ -0.63
GSE1-201ENST00000253458 C2orf83Q53S99 150 aa11.15□□□□□ -0.63
GSE1-201ENST00000253458 SPTBN2O15020 2390 aa11.15□□□□□ -0.63
GSE1-201ENST00000253458 HYPMO75409 117 aa11.14□□□□□ -0.63
GSE1-201ENST00000253458 RFPL3SP0C7P2 107 aa11.14□□□□□ -0.63
GSE1-201ENST00000253458 BSPH1Q075Z2 132 aa11.14□□□□□ -0.63
GSE1-201ENST00000253458 TMEM167BQ9NRX6 74 aa11.14□□□□□ -0.63
GSE1-201ENST00000253458 SLC25A20O43772 301 aa11.14□□□□□ -0.63
GSE1-201ENST00000253458 CLPPQ16740 277 aaPredicted RBP11.14□□□□□ -0.63
GSE1-201ENST00000253458 MMP26Q9NRE1 261 aa11.14□□□□□ -0.63
GSE1-201ENST00000253458 ARRDC5A6NEK1 342 aa11.14□□□□□ -0.63
GSE1-201ENST00000253458 LINC00869P0C866 280 aa11.14□□□□□ -0.63
GSE1-201ENST00000253458 RAB9AP51151 201 aa11.14□□□□□ -0.63
GSE1-201ENST00000253458 RND2P52198 227 aa11.14□□□□□ -0.63
GSE1-201ENST00000253458 MAJINQ3KP22 176 aa11.14□□□□□ -0.63
GSE1-201ENST00000253458 C1orf162Q8NEQ5 155 aaPredicted RBP11.14□□□□□ -0.63
GSE1-201ENST00000253458 KLF14Q8TD94 323 aaPredicted RBP11.14□□□□□ -0.63
GSE1-201ENST00000253458 GP6Q9HCN6 339 aa11.14□□□□□ -0.63
GSE1-201ENST00000253458 HS3ST3B1Q9Y662 390 aa11.14□□□□□ -0.63
GSE1-201ENST00000253458 HIST1H1BP16401 226 aaKnown RBP11.14□□□□□ -0.63
GSE1-201ENST00000253458 FAM106AQ4KMX7 169 aa11.14□□□□□ -0.63
GSE1-201ENST00000253458 PGPA6NDG6 321 aa11.14□□□□□ -0.63
GSE1-201ENST00000253458 RPL36A-HNRNPH2H7BZ11 118 aa11.14□□□□□ -0.63
GSE1-201ENST00000253458 SNAI2O43623 268 aa11.14□□□□□ -0.63
GSE1-201ENST00000253458 IL24Q13007 206 aa11.14□□□□□ -0.63
GSE1-201ENST00000253458 LEUTXA8MZ59 168 aa11.13□□□□□ -0.63
GSE1-201ENST00000253458 PCP4P48539 62 aa11.13□□□□□ -0.63
GSE1-201ENST00000253458 MAPK1IP1LQ8NDC0 245 aa11.13□□□□□ -0.63
GSE1-201ENST00000253458 ST6GAL2Q96JF0 529 aa11.13□□□□□ -0.63
GSE1-201ENST00000253458 WFIKKN1Q96NZ8 548 aa11.13□□□□□ -0.63
GSE1-201ENST00000253458 ABCA3Q99758 1704 aa11.13□□□□□ -0.63
GSE1-201ENST00000253458 A0A0G2JMM0 328 aa11.13□□□□□ -0.63
GSE1-201ENST00000253458 A0A1W2PPB8 328 aa11.13□□□□□ -0.63
GSE1-201ENST00000253458 A0A1W2PRS3 328 aa11.13□□□□□ -0.63
GSE1-201ENST00000253458 KIR3DP1A8MWS1 328 aa11.13□□□□□ -0.63
GSE1-201ENST00000253458 NPFFO15130 113 aa11.13□□□□□ -0.63
GSE1-201ENST00000253458 INHBBP09529 407 aa11.13□□□□□ -0.63
GSE1-201ENST00000253458 C1orf53Q5VUE5 145 aa11.13□□□□□ -0.63
GSE1-201ENST00000253458 A0A0U1RRA0 63 aa11.13□□□□□ -0.63
GSE1-201ENST00000253458 LSM6P62312 80 aaKnown RBP11.13□□□□□ -0.63
GSE1-201ENST00000253458 EWSR1Q01844 656 aaKnown RBP eCLIP11.13□□□□□ -0.637e-9■■■■■ 34.3
GSE1-201ENST00000253458 SLC35B3Q9H1N7 401 aa11.13□□□□□ -0.63
GSE1-201ENST00000253458 CACNA1DQ01668 2161 aa11.13□□□□□ -0.63
GSE1-201ENST00000253458 CA1P00915 261 aaPredicted RBP11.13□□□□□ -0.63
GSE1-201ENST00000253458 MPV17P39210 176 aa11.13□□□□□ -0.63
GSE1-201ENST00000253458 CACFD1Q9UGQ2 172 aa11.13□□□□□ -0.63
GSE1-201ENST00000253458 AHRRA9YTQ3 701 aa11.13□□□□□ -0.63
GSE1-201ENST00000253458 MFAP2P55001 183 aa11.13□□□□□ -0.63
GSE1-201ENST00000253458 SHISA5Q8N114 240 aa11.13□□□□□ -0.63
GSE1-201ENST00000253458 TRAV8-2A0A0B4J237 113 aa11.12□□□□□ -0.63
GSE1-201ENST00000253458 GP1BAP07359 652 aa11.12□□□□□ -0.63
GSE1-201ENST00000253458 TMEM160Q9NX00 188 aa11.12□□□□□ -0.63
GSE1-201ENST00000253458 DUXBA0A1W2PPF3 345 aa11.12□□□□□ -0.63
GSE1-201ENST00000253458 NDUFS5O43920 106 aa11.12□□□□□ -0.63
GSE1-201ENST00000253458 SRSF7Q16629 238 aaKnown RBP eCLIP11.12□□□□□ -0.63
GSE1-201ENST00000253458 PPP1R32Q7Z5V6 425 aa11.12□□□□□ -0.63
GSE1-201ENST00000253458 SLC35E3Q7Z769 313 aa11.12□□□□□ -0.63
GSE1-201ENST00000253458 SYT8Q8NBV8 401 aa11.12□□□□□ -0.63
GSE1-201ENST00000253458 RNF133Q8WVZ7 376 aa11.12□□□□□ -0.63
GSE1-201ENST00000253458 JKAMPQ9P055 326 aa11.12□□□□□ -0.63
GSE1-201ENST00000253458 PXMP4Q9Y6I8 212 aa11.12□□□□□ -0.63
GSE1-201ENST00000253458 IGKV1D-33P01593 117 aa11.12□□□□□ -0.63
GSE1-201ENST00000253458 IGKV1-33P01594 117 aa11.12□□□□□ -0.63
GSE1-201ENST00000253458 CXCL3P19876 107 aa11.12□□□□□ -0.63
GSE1-201ENST00000253458 MIC13Q5XKP0 118 aa11.12□□□□□ -0.63
GSE1-201ENST00000253458 CHAC2Q8WUX2 184 aa11.12□□□□□ -0.63
GSE1-201ENST00000253458 ZNF625Q96I27 306 aaPredicted RBP11.12□□□□□ -0.63
GSE1-201ENST00000253458 RHOVQ96L33 236 aa11.12□□□□□ -0.63
GSE1-201ENST00000253458 IL13RA2Q14627 380 aa11.12□□□□□ -0.63
GSE1-201ENST00000253458 SPATA45Q537H7 98 aa11.12□□□□□ -0.63
GSE1-201ENST00000253458 VGLL1Q99990 258 aa11.12□□□□□ -0.63
GSE1-201ENST00000253458 KLK13Q9UKR3 277 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms