RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 CTXND1A0A1B0GTU2 59 aa10.08□□□□□ -0.8
USHBP1-201ENST00000252597 NUPR1O60356 82 aa10.08□□□□□ -0.8
USHBP1-201ENST00000252597 PSPNO60542 156 aa10.08□□□□□ -0.8
USHBP1-201ENST00000252597 PMCHP20382 165 aa10.08□□□□□ -0.8
USHBP1-201ENST00000252597 IL3RAP26951 378 aa10.08□□□□□ -0.8
USHBP1-201ENST00000252597 FOXL2NBQ6ZUU3 175 aa10.08□□□□□ -0.8
USHBP1-201ENST00000252597 ZNF114Q8NC26 417 aa10.08□□□□□ -0.8
USHBP1-201ENST00000252597 DEFB108BQ8NET1 73 aa10.08□□□□□ -0.8
USHBP1-201ENST00000252597 RTL8AQ9BWD3 113 aa10.08□□□□□ -0.8
USHBP1-201ENST00000252597 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.08□□□□□ -0.8
USHBP1-201ENST00000252597 LOXL2Q9Y4K0 774 aa10.08□□□□□ -0.8
USHBP1-201ENST00000252597 PRB4P10163 310 aaPredicted RBP10.08□□□□□ -0.8
USHBP1-201ENST00000252597 CATR1Q13166 79 aa10.08□□□□□ -0.8
USHBP1-201ENST00000252597 IQCJQ1A5X6 159 aa10.08□□□□□ -0.8
USHBP1-201ENST00000252597 TIPARPQ7Z3E1 657 aaKnown RBP10.08□□□□□ -0.8
USHBP1-201ENST00000252597 TMEM147Q9BVK8 224 aa10.08□□□□□ -0.8
USHBP1-201ENST00000252597 TRBV24-1A0A075B6N3 115 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 MGST1P10620 155 aaKnown RBP10.07□□□□□ -0.8
USHBP1-201ENST00000252597 IER3P46695 156 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 TFPI2P48307 235 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 SLC25A40Q8TBP6 338 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 FAM122AQ96E09 287 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 BTF3L4Q96K17 158 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 CTDSP1Q9GZU7 261 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 RIMS4Q9H426 269 aaPredicted RBP10.07□□□□□ -0.8
USHBP1-201ENST00000252597 SEMA5BQ9P283 1151 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 PPIAL4AQ9Y536 164 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 A8MWP6 167 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 HBZP02008 142 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 PFN1P07737 140 aaKnown RBP10.07□□□□□ -0.8
USHBP1-201ENST00000252597 OR5I1Q13606 314 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 ATOH7Q8N100 152 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 OR4A16Q8NH70 328 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 TECTBQ96PL2 329 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 WDR54Q9H977 334 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 MANBALQ9NQG1 85 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 ABCA4P78363 2273 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 C12orf77C9JDV5 145 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 M0R1X1 148 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 TIMM8AO60220 97 aaPredicted RBP10.07□□□□□ -0.8
USHBP1-201ENST00000252597 HAND1O96004 215 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 FXYD3Q14802 87 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 TDRG1Q3Y452 100 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 RIPPLY2Q5TAB7 128 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 OR2M7Q8NG81 312 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 RNF138Q8WVD3 245 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 HSPB9Q9BQS6 159 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 QTRT1Q9BXR0 403 aaKnown RBP10.07□□□□□ -0.8
USHBP1-201ENST00000252597 NPCDR1Q9BY65 106 aa10.07□□□□□ -0.8
USHBP1-201ENST00000252597 IGHV3OR15-7A0A075B7D8 119 aa10.06□□□□□ -0.8
USHBP1-201ENST00000252597 DUXBA0A1W2PPF3 345 aa10.06□□□□□ -0.8
USHBP1-201ENST00000252597 HOXA6P31267 233 aa10.06□□□□□ -0.8
USHBP1-201ENST00000252597 HTD2P86397 168 aa10.06□□□□□ -0.8
USHBP1-201ENST00000252597 TMEM251Q8N6I4 163 aa10.06□□□□□ -0.8
USHBP1-201ENST00000252597 NHLRC2Q8NBF2 726 aa10.06□□□□□ -0.8
USHBP1-201ENST00000252597 OR8G5Q8NG78 346 aa10.06□□□□□ -0.8
USHBP1-201ENST00000252597 WNK2Q9Y3S1 2297 aa10.06□□□□□ -0.8
USHBP1-201ENST00000252597 SCO2A0A1W2PP80 73 aa10.06□□□□□ -0.8
USHBP1-201ENST00000252597 J3QT63 122 aa10.06□□□□□ -0.8
USHBP1-201ENST00000252597 FCN1O00602 326 aa10.06□□□□□ -0.8
USHBP1-201ENST00000252597 IGHV3-48P01763 117 aa10.06□□□□□ -0.8
USHBP1-201ENST00000252597 ARL14EPLP0DKL9 152 aa10.06□□□□□ -0.8
USHBP1-201ENST00000252597 HOXC12P31275 282 aa10.06□□□□□ -0.8
USHBP1-201ENST00000252597 ERVFC1-1P60608 527 aa10.06□□□□□ -0.8
USHBP1-201ENST00000252597 C6orf15Q6UXA7 325 aaPredicted RBP10.06□□□□□ -0.8
USHBP1-201ENST00000252597 CMTM2Q8TAZ6 248 aa10.06□□□□□ -0.8
USHBP1-201ENST00000252597 MBD3L1Q8WWY6 194 aa10.06□□□□□ -0.8
USHBP1-201ENST00000252597 POM121L2Q96KW2 1035 aa10.06□□□□□ -0.8
USHBP1-201ENST00000252597 NDUFAF3Q9BU61 184 aa10.06□□□□□ -0.8
USHBP1-201ENST00000252597 METRNQ9UJH8 293 aa10.06□□□□□ -0.8
USHBP1-201ENST00000252597 COL12A1Q99715 3063 aa10.06□□□□□ -0.8
USHBP1-201ENST00000252597 ADGRG4Q8IZF6 3080 aa10.05□□□□□ -0.8
USHBP1-201ENST00000252597 TGOLN2O43493 480 aa10.05□□□□□ -0.8
USHBP1-201ENST00000252597 FRMD6-AS1P0C7T7 363 aa10.05□□□□□ -0.8
USHBP1-201ENST00000252597 ARR3P36575 388 aa10.05□□□□□ -0.8
USHBP1-201ENST00000252597 ACOT6Q3I5F7 207 aaPredicted RBP10.05□□□□□ -0.8
USHBP1-201ENST00000252597 ATRXP46100 2492 aa10.05□□□□□ -0.8
USHBP1-201ENST00000252597 LOC102723996A0A087X1L8 192 aa10.05□□□□□ -0.8
USHBP1-201ENST00000252597 C17orf112F2Z3M2 114 aa10.05□□□□□ -0.8
USHBP1-201ENST00000252597 RND2P52198 227 aa10.05□□□□□ -0.8
USHBP1-201ENST00000252597 TBC1D28Q2M2D7 210 aa10.05□□□□□ -0.8
USHBP1-201ENST00000252597 DBX2Q6ZNG2 339 aa10.05□□□□□ -0.8
USHBP1-201ENST00000252597 SNHG12Q9BXW3 62 aa10.05□□□□□ -0.8
USHBP1-201ENST00000252597 TTTY12Q9BZ98 90 aa10.05□□□□□ -0.8
USHBP1-201ENST00000252597 OR6C3Q9NZP0 311 aa10.05□□□□□ -0.8
USHBP1-201ENST00000252597 RPH3ALQ9UNE2 315 aa10.05□□□□□ -0.8
USHBP1-201ENST00000252597 LRRC30A6NM36 301 aa10.05□□□□□ -0.8
USHBP1-201ENST00000252597 RNF212BA8MTL3 300 aa10.05□□□□□ -0.8
USHBP1-201ENST00000252597 NPPCP23582 126 aa10.05□□□□□ -0.8
USHBP1-201ENST00000252597 GATA2P23769 480 aaPredicted RBP10.05□□□□□ -0.8
USHBP1-201ENST00000252597 GPR12P47775 334 aa10.05□□□□□ -0.8
USHBP1-201ENST00000252597 GNB1P62873 340 aa10.05□□□□□ -0.8
USHBP1-201ENST00000252597 ABLIM2Q6H8Q1 611 aa10.05□□□□□ -0.8
USHBP1-201ENST00000252597 MRPL54Q6P161 138 aaKnown RBP10.05□□□□□ -0.8
USHBP1-201ENST00000252597 P2RX4Q99571 388 aa10.05□□□□□ -0.8
USHBP1-201ENST00000252597 NAGKQ9UJ70 344 aa10.05□□□□□ -0.8
USHBP1-201ENST00000252597 PCNX2A6NKB5 2137 aa10.05□□□□□ -0.8
USHBP1-201ENST00000252597 OR5B21A6NL26 309 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 M0R143 59 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 OR10J4P0C629 311 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms