RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 LINC00473A8K010 186 aa18.05■□□□□ 0.48
SH2D3A-201ENST00000245908 FOXF2Q12947 444 aa18.05■□□□□ 0.48
SH2D3A-201ENST00000245908 TRAT1Q6PIZ9 186 aa18.05■□□□□ 0.48
SH2D3A-201ENST00000245908 TGIF2LXQ8IUE1 241 aa18.05■□□□□ 0.48
SH2D3A-201ENST00000245908 BEND2Q8NDZ0 799 aa18.05■□□□□ 0.48
SH2D3A-201ENST00000245908 FRZBQ92765 325 aa18.05■□□□□ 0.48
SH2D3A-201ENST00000245908 HIST1H2BLQ99880 126 aa18.05■□□□□ 0.48
SH2D3A-201ENST00000245908 PTPRBP23467 1997 aa18.05■□□□□ 0.48
SH2D3A-201ENST00000245908 CACNA1GO43497 2377 aa18.05■□□□□ 0.48
SH2D3A-201ENST00000245908 IGHV3-43A0A0B4J1X8 118 aa18.05■□□□□ 0.48
SH2D3A-201ENST00000245908 A8MWP6 167 aa18.05■□□□□ 0.48
SH2D3A-201ENST00000245908 CLDN34H7C241 214 aa18.05■□□□□ 0.48
SH2D3A-201ENST00000245908 IGHV3-43DP0DP04 118 aa18.05■□□□□ 0.48
SH2D3A-201ENST00000245908 FGF7P21781 194 aa18.05■□□□□ 0.48
SH2D3A-201ENST00000245908 HTD2P86397 168 aa18.05■□□□□ 0.48
SH2D3A-201ENST00000245908 WDR25Q64LD2 544 aaPredicted RBP18.05■□□□□ 0.48
SH2D3A-201ENST00000245908 OR10P1Q8NGE3 313 aa18.05■□□□□ 0.48
SH2D3A-201ENST00000245908 ZDHHC16Q969W1 377 aa18.05■□□□□ 0.48
SH2D3A-201ENST00000245908 IGHV1-18A0A0C4DH31 117 aa18.04■□□□□ 0.48
SH2D3A-201ENST00000245908 CTXND1A0A1B0GTU2 59 aa18.04■□□□□ 0.48
SH2D3A-201ENST00000245908 C15orf65H3BRN8 121 aa18.04■□□□□ 0.48
SH2D3A-201ENST00000245908 DVL1O14640 695 aa18.04■□□□□ 0.48
SH2D3A-201ENST00000245908 MBP02144 154 aa18.04■□□□□ 0.48
SH2D3A-201ENST00000245908 RELQ04864 619 aaPredicted RBP18.04■□□□□ 0.48
SH2D3A-201ENST00000245908 JOSD1Q15040 202 aaPredicted RBP18.04■□□□□ 0.48
SH2D3A-201ENST00000245908 VWC2Q2TAL6 325 aa18.04■□□□□ 0.48
SH2D3A-201ENST00000245908 PIP4P1Q86T03 277 aa18.04■□□□□ 0.48
SH2D3A-201ENST00000245908 CD177Q8N6Q3 437 aa18.04■□□□□ 0.48
SH2D3A-201ENST00000245908 AGMATQ9BSE5 352 aa18.04■□□□□ 0.48
SH2D3A-201ENST00000245908 NDUFAF3Q9BU61 184 aa18.04■□□□□ 0.48
SH2D3A-201ENST00000245908 URB1O60287 2271 aaKnown RBP18.04■□□□□ 0.48
SH2D3A-201ENST00000245908 SPINT2O43291 252 aa18.03■□□□□ 0.48
SH2D3A-201ENST00000245908 ADH4P08319 380 aa18.03■□□□□ 0.48
SH2D3A-201ENST00000245908 C1orf87Q8N0U7 546 aa18.03■□□□□ 0.48
SH2D3A-201ENST00000245908 LRRC29Q8WV35 223 aa18.03■□□□□ 0.48
SH2D3A-201ENST00000245908 FAM210BQ96KR6 192 aa18.03■□□□□ 0.48
SH2D3A-201ENST00000245908 PSG11Q9UQ72 335 aa18.03■□□□□ 0.48
SH2D3A-201ENST00000245908 NUTF2P61970 127 aaKnown RBP18.03■□□□□ 0.48
SH2D3A-201ENST00000245908 MEF2BQ02080 365 aaPredicted RBP18.03■□□□□ 0.48
SH2D3A-201ENST00000245908 C1orf174Q8IYL3 243 aa18.03■□□□□ 0.48
SH2D3A-201ENST00000245908 RFESDQ8TAC1 157 aa18.03■□□□□ 0.48
SH2D3A-201ENST00000245908 RNASEH2CQ8TDP1 164 aaKnown RBP18.03■□□□□ 0.48
SH2D3A-201ENST00000245908 WASF3Q9UPY6 502 aa18.03■□□□□ 0.48
SH2D3A-201ENST00000245908 MZT1Q08AG7 82 aa18.02■□□□□ 0.48
SH2D3A-201ENST00000245908 PITPNC1Q9UKF7 332 aa18.02■□□□□ 0.48
SH2D3A-201ENST00000245908 PHOX2AO14813 284 aa18.02■□□□□ 0.47
SH2D3A-201ENST00000245908 WT1P19544 449 aaPredicted RBP18.02■□□□□ 0.47
SH2D3A-201ENST00000245908 PRDX2P32119 198 aa18.02■□□□□ 0.47
SH2D3A-201ENST00000245908 CTDSP1Q9GZU7 261 aa18.02■□□□□ 0.47
SH2D3A-201ENST00000245908 SLC25A22Q9H936 323 aa18.02■□□□□ 0.47
SH2D3A-201ENST00000245908 ASCL3Q9NQ33 180 aa18.02■□□□□ 0.47
SH2D3A-201ENST00000245908 ZNF71Q9NQZ8 489 aaPredicted RBP18.02■□□□□ 0.47
SH2D3A-201ENST00000245908 BDP1A6H8Y1 2624 aa18.02■□□□□ 0.47
SH2D3A-201ENST00000245908 MARCH11A6NNE9 402 aa18.01■□□□□ 0.47
SH2D3A-201ENST00000245908 DEFB108AA8MXU0 73 aa18.01■□□□□ 0.47
SH2D3A-201ENST00000245908 TNFSF13O75888 250 aa18.01■□□□□ 0.47
SH2D3A-201ENST00000245908 MDKP21741 143 aaPredicted RBP18.01■□□□□ 0.47
SH2D3A-201ENST00000245908 LINC00205P59089 165 aa18.01■□□□□ 0.47
SH2D3A-201ENST00000245908 TFF3Q07654 80 aa18.01■□□□□ 0.47
SH2D3A-201ENST00000245908 HNF4GQ14541 408 aa18.01■□□□□ 0.47
SH2D3A-201ENST00000245908 OR10G9Q8NGN4 311 aa18.01■□□□□ 0.47
SH2D3A-201ENST00000245908 OR10G7Q8NGN6 311 aa18.01■□□□□ 0.47
SH2D3A-201ENST00000245908 DCTN5Q9BTE1 182 aa18.01■□□□□ 0.47
SH2D3A-201ENST00000245908 NPCDR1Q9BY65 106 aa18.01■□□□□ 0.47
SH2D3A-201ENST00000245908 NAT8Q9UHE5 227 aa18.01■□□□□ 0.47
SH2D3A-201ENST00000245908 GNB2P62879 340 aa18.01■□□□□ 0.47
SH2D3A-201ENST00000245908 USF2Q15853 346 aaPredicted RBP18.01■□□□□ 0.47
SH2D3A-201ENST00000245908 FFAR4Q5NUL3 377 aa18.01■□□□□ 0.47
SH2D3A-201ENST00000245908 CYP2G1PQ6ZSU1 146 aa18.01■□□□□ 0.47
SH2D3A-201ENST00000245908 OPN3Q9H1Y3 402 aaPredicted RBP18.01■□□□□ 0.47
SH2D3A-201ENST00000245908 PROCRQ9UNN8 238 aa18.01■□□□□ 0.47
SH2D3A-201ENST00000245908 AHRRA9YTQ3 701 aa18■□□□□ 0.47
SH2D3A-201ENST00000245908 CGAP01215 116 aa18■□□□□ 0.47
SH2D3A-201ENST00000245908 PLA2G5P39877 138 aa18■□□□□ 0.47
SH2D3A-201ENST00000245908 PSMB3P49720 205 aa18■□□□□ 0.47
SH2D3A-201ENST00000245908 BHLHA15Q7RTS1 189 aaPredicted RBP18■□□□□ 0.47
SH2D3A-201ENST00000245908 STARD4Q96DR4 205 aa18■□□□□ 0.47
SH2D3A-201ENST00000245908 SMIM7Q9BQ49 75 aa18■□□□□ 0.47
SH2D3A-201ENST00000245908 ACTR3CQ9C0K3 210 aaPredicted RBP18■□□□□ 0.47
SH2D3A-201ENST00000245908 CACNA1DQ01668 2161 aa18■□□□□ 0.47
SH2D3A-201ENST00000245908 TMEM250H0YL14 139 aa18■□□□□ 0.47
SH2D3A-201ENST00000245908 RBMXL2O75526 392 aaKnown RBP18■□□□□ 0.47
SH2D3A-201ENST00000245908 OPN1MWP04001 364 aa18■□□□□ 0.47
SH2D3A-201ENST00000245908 OPN1MW2P0DN77 364 aa18■□□□□ 0.47
SH2D3A-201ENST00000245908 OPN1MW3P0DN78 364 aa18■□□□□ 0.47
SH2D3A-201ENST00000245908 EGR1P18146 543 aa18■□□□□ 0.47
SH2D3A-201ENST00000245908 EDDM3AQ14507 147 aa18■□□□□ 0.47
SH2D3A-201ENST00000245908 P2RY6Q15077 328 aa18■□□□□ 0.47
SH2D3A-201ENST00000245908 FAM169BQ8N8A8 192 aa18■□□□□ 0.47
SH2D3A-201ENST00000245908 R3HDM4Q96D70 268 aa18■□□□□ 0.47
SH2D3A-201ENST00000245908 DKK4Q9UBT3 224 aa18■□□□□ 0.47
SH2D3A-201ENST00000245908 PRR14LQ5THK1 2151 aa17.99■□□□□ 0.47
SH2D3A-201ENST00000245908 TRBV24-1A0A075B6N3 115 aa17.99■□□□□ 0.47
SH2D3A-201ENST00000245908 SRRM5B3KS81 715 aa17.99■□□□□ 0.47
SH2D3A-201ENST00000245908 KBTBD11O94819 623 aa17.99■□□□□ 0.47
SH2D3A-201ENST00000245908 GZMBP10144 247 aa17.99■□□□□ 0.47
SH2D3A-201ENST00000245908 DUTP33316 252 aaKnown RBP17.99■□□□□ 0.47
SH2D3A-201ENST00000245908 AARDQ4LEZ3 155 aa17.99■□□□□ 0.47
SH2D3A-201ENST00000245908 NCR3LG1Q68D85 454 aa17.99■□□□□ 0.47
SH2D3A-201ENST00000245908 TMEM183AQ8IXX5 376 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms