RNA–Protein interactions for RNA: ENST00000244709.8

TREM1-201, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TREM1, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-201ENST00000244709 FAM96BQ9Y3D0 163 aa9.24□□□□□ -0.93
TREM1-201ENST00000244709 F8P00451 2351 aa9.24□□□□□ -0.93
TREM1-201ENST00000244709 NAV3Q8IVL0 2385 aa9.24□□□□□ -0.93
TREM1-201ENST00000244709 CREBL2O60519 120 aaPredicted RBP9.23□□□□□ -0.93
TREM1-201ENST00000244709 B3GALNT1O75752 331 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 S1PR2O95136 353 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 VENTXO95231 258 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 DUS4LO95620 317 aaKnown RBP9.23□□□□□ -0.93
TREM1-201ENST00000244709 CRYZL1O95825 349 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 IGKV1-39P01597 117 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 IGKV1D-39P04432 117 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 SERPINE2P07093 398 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 FBP1P09467 338 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 HNF1AP20823 631 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 CD24P25063 80 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 LPAR6P43657 344 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 RAB13P51153 203 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 TAGLNQ01995 201 aaKnown RBP9.23□□□□□ -0.93
TREM1-201ENST00000244709 HABP2Q14520 560 aaPredicted RBP9.23□□□□□ -0.93
TREM1-201ENST00000244709 DEFB112Q30KQ8 113 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 FBLN7Q53RD9 439 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 LIAT1Q6ZQX7 453 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 PDPNQ86YL7 162 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 TCTEX1D1Q8N7M0 179 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 OR4S2Q8NH73 311 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 MITD1Q8WV92 249 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 MEGF9Q9H1U4 602 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 OR51J1Q9H342 316 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 A0A1B0GVG6 124 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 SNRPGP15A8MWD9 76 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 RBFOX2O43251 390 aaKnown RBP eCLIP9.23□□□□□ -0.93
TREM1-201ENST00000244709 IGKV1D-33P01593 117 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 IGKV1-33P01594 117 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 SNRNP70P08621 437 aaKnown RBP9.23□□□□□ -0.93
TREM1-201ENST00000244709 RRASP10301 218 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 CD1BP29016 333 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 MC5RP33032 325 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 ARHGDIBP52566 201 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 SELENOHQ8IZQ5 122 aaKnown RBP9.23□□□□□ -0.93
TREM1-201ENST00000244709 COQ8AQ8NI60 647 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 CD300LFQ8TDQ1 290 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 TMEM56Q96MV1 263 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 FAM212BQ9NTI7 297 aaPredicted RBP9.23□□□□□ -0.93
TREM1-201ENST00000244709 TMEM56-RWDD3S4R434 201 aa9.23□□□□□ -0.93
TREM1-201ENST00000244709 HIVEP2P31629 2446 aa9.22□□□□□ -0.93
TREM1-201ENST00000244709 hCG_2014768A0A024R1R8 64 aa9.22□□□□□ -0.93
TREM1-201ENST00000244709 FAM90A9PA6NNJ1 464 aa9.22□□□□□ -0.93
TREM1-201ENST00000244709 CDS2O95674 445 aa9.22□□□□□ -0.93
TREM1-201ENST00000244709 HPRT1P00492 218 aa9.22□□□□□ -0.93
TREM1-201ENST00000244709 BRS3P32247 399 aa9.22□□□□□ -0.93
TREM1-201ENST00000244709 TMEM268Q5VZI3 342 aa9.22□□□□□ -0.93
TREM1-201ENST00000244709 ZNF695Q8IW36 515 aa9.22□□□□□ -0.93
TREM1-201ENST00000244709 LGI3Q8N145 548 aa9.22□□□□□ -0.93
TREM1-201ENST00000244709 C12orf45Q8N5I9 185 aaPredicted RBP9.22□□□□□ -0.93
TREM1-201ENST00000244709 UXS1Q8NBZ7 420 aa9.22□□□□□ -0.93
TREM1-201ENST00000244709 FLYWCH2Q96CP2 140 aaKnown RBP9.22□□□□□ -0.93
TREM1-201ENST00000244709 RITA1Q96K30 269 aa9.22□□□□□ -0.93
TREM1-201ENST00000244709 ZNF48Q96MX3 618 aaPredicted RBP9.22□□□□□ -0.93
TREM1-201ENST00000244709 PHB2Q99623 299 aa9.22□□□□□ -0.93
TREM1-201ENST00000244709 A0A0B4J2A0 478 aa9.21□□□□□ -0.93
TREM1-201ENST00000244709 SHOXO15266 292 aa9.21□□□□□ -0.93
TREM1-201ENST00000244709 SSNA1O43805 119 aa9.21□□□□□ -0.93
TREM1-201ENST00000244709 RPA2P15927 270 aa9.21□□□□□ -0.93
TREM1-201ENST00000244709 RPS16P62249 146 aaKnown RBP9.21□□□□□ -0.93
TREM1-201ENST00000244709 SRPXP78539 464 aa9.21□□□□□ -0.93
TREM1-201ENST00000244709 HES1Q14469 280 aa9.21□□□□□ -0.93
TREM1-201ENST00000244709 LRRC75BQ2VPJ9 315 aa9.21□□□□□ -0.93
TREM1-201ENST00000244709 TMEM177Q53S58 311 aa9.21□□□□□ -0.93
TREM1-201ENST00000244709 DHRS7BQ6IAN0 325 aaPredicted RBP9.21□□□□□ -0.93
TREM1-201ENST00000244709 SLC35G3Q8N808 338 aa9.21□□□□□ -0.93
TREM1-201ENST00000244709 LRTM2Q8N967 370 aa9.21□□□□□ -0.93
TREM1-201ENST00000244709 OR4C13Q8NGP0 309 aa9.21□□□□□ -0.93
TREM1-201ENST00000244709 RBPMSQ93062 196 aaKnown RBP9.21□□□□□ -0.93
TREM1-201ENST00000244709 R3HDM4Q96D70 268 aa9.21□□□□□ -0.93
TREM1-201ENST00000244709 HARBI1Q96MB7 349 aa9.21□□□□□ -0.93
TREM1-201ENST00000244709 SSX3Q99909 188 aa9.21□□□□□ -0.93
TREM1-201ENST00000244709 PLEKHA2Q9HB19 425 aa9.21□□□□□ -0.93
TREM1-201ENST00000244709 SHPKQ9UHJ6 478 aa9.21□□□□□ -0.93
TREM1-201ENST00000244709 SRRM4A7MD48 611 aaKnown RBP9.2□□□□□ -0.94
TREM1-201ENST00000244709 INAFM1C9JVW0 142 aa9.2□□□□□ -0.94
TREM1-201ENST00000244709 MOSP00540 346 aa9.2□□□□□ -0.94
TREM1-201ENST00000244709 IGKV1-5P01602 117 aa9.2□□□□□ -0.94
TREM1-201ENST00000244709 NQO2P16083 231 aa9.2□□□□□ -0.94
TREM1-201ENST00000244709 CNTFRP26992 372 aa9.2□□□□□ -0.94
TREM1-201ENST00000244709 G6PCP35575 357 aa9.2□□□□□ -0.94
TREM1-201ENST00000244709 DYNLT3P51808 116 aa9.2□□□□□ -0.94
TREM1-201ENST00000244709 HNF4GQ14541 408 aa9.2□□□□□ -0.94
TREM1-201ENST00000244709 SSX9Q7RTT3 188 aa9.2□□□□□ -0.94
TREM1-201ENST00000244709 LYZL2Q7Z4W2 148 aa9.2□□□□□ -0.94
TREM1-201ENST00000244709 VKORC1L1Q8N0U8 176 aa9.2□□□□□ -0.94
TREM1-201ENST00000244709 OR2T10Q8NGZ9 312 aa9.2□□□□□ -0.94
TREM1-201ENST00000244709 OSR1Q8TAX0 266 aaPredicted RBP9.2□□□□□ -0.94
TREM1-201ENST00000244709 PIFOQ8TCI5 191 aa9.2□□□□□ -0.94
TREM1-201ENST00000244709 IL22RA2Q969J5 263 aa9.2□□□□□ -0.94
TREM1-201ENST00000244709 EAF1Q96JC9 268 aaPredicted RBP9.2□□□□□ -0.94
TREM1-201ENST00000244709 COMMD9Q9P000 198 aa9.2□□□□□ -0.94
TREM1-201ENST00000244709 DBX1A6NMT0 343 aa9.2□□□□□ -0.94
TREM1-201ENST00000244709 MARCH11A6NNE9 402 aa9.2□□□□□ -0.94
TREM1-201ENST00000244709 H3BUX3 64 aa9.2□□□□□ -0.94
TREM1-201ENST00000244709 ADAP1O75689 374 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms