RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 ATRAIDQ6UW56 229 aa13.14□□□□□ -0.31
ITGA4-201ENST00000233573 TMEM14EPQ6UXP3 125 aa13.14□□□□□ -0.31
ITGA4-201ENST00000233573 H2BFWTQ7Z2G1 175 aa13.14□□□□□ -0.31
ITGA4-201ENST00000233573 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.14□□□□□ -0.31
ITGA4-201ENST00000233573 OR2G3Q8NGZ4 309 aa13.14□□□□□ -0.31
ITGA4-201ENST00000233573 NARS2Q96I59 477 aaKnown RBP13.14□□□□□ -0.31
ITGA4-201ENST00000233573 SCRT1Q9BWW7 348 aa13.14□□□□□ -0.31
ITGA4-201ENST00000233573 TMEM231Q9H6L2 316 aa13.14□□□□□ -0.31
ITGA4-201ENST00000233573 C19orf12Q9NSK7 152 aa13.14□□□□□ -0.31
ITGA4-201ENST00000233573 CISD1Q9NZ45 108 aaKnown RBP13.14□□□□□ -0.31
ITGA4-201ENST00000233573 FAM96BQ9Y3D0 163 aa13.14□□□□□ -0.31
ITGA4-201ENST00000233573 LINC00312Q9Y6C7 94 aa13.14□□□□□ -0.31
ITGA4-201ENST00000233573 B9A039 149 aa13.14□□□□□ -0.31
ITGA4-201ENST00000233573 FCGR3BO75015 233 aa13.14□□□□□ -0.31
ITGA4-201ENST00000233573 HPRT1P00492 218 aa13.14□□□□□ -0.31
ITGA4-201ENST00000233573 METTL15P1P0C7V9 234 aa13.14□□□□□ -0.31
ITGA4-201ENST00000233573 R3HDM4Q96D70 268 aa13.14□□□□□ -0.31
ITGA4-201ENST00000233573 GNPNAT1Q96EK6 184 aaPredicted RBP13.14□□□□□ -0.31
ITGA4-201ENST00000233573 UQCC1Q9NVA1 299 aa13.14□□□□□ -0.31
ITGA4-201ENST00000233573 SLC25A10Q9UBX3 287 aaPredicted RBP13.14□□□□□ -0.31
ITGA4-201ENST00000233573 SAA2-SAA4A0A096LPE2 208 aa13.13□□□□□ -0.31
ITGA4-201ENST00000233573 A0A1W2PPE3 182 aa13.13□□□□□ -0.31
ITGA4-201ENST00000233573 hADV38S2A0JD32 116 aa13.13□□□□□ -0.31
ITGA4-201ENST00000233573 FAM157AC9JC47 383 aa13.13□□□□□ -0.31
ITGA4-201ENST00000233573 SAA2P0DJI9 122 aaPredicted RBP13.13□□□□□ -0.31
ITGA4-201ENST00000233573 CAMLGP49069 296 aa13.13□□□□□ -0.31
ITGA4-201ENST00000233573 RUNX1Q01196 453 aa13.13□□□□□ -0.31
ITGA4-201ENST00000233573 ZNF525Q8N782 197 aa13.13□□□□□ -0.31
ITGA4-201ENST00000233573 CCL17Q92583 94 aa13.13□□□□□ -0.31
ITGA4-201ENST00000233573 DYNLRB1Q9NP97 96 aa13.13□□□□□ -0.31
ITGA4-201ENST00000233573 RPUSD1Q9UJJ7 312 aaKnown RBP13.13□□□□□ -0.31
ITGA4-201ENST00000233573 CARHSP1Q9Y2V2 147 aaKnown RBP13.13□□□□□ -0.31
ITGA4-201ENST00000233573 FAM90A9PA6NNJ1 464 aa13.12□□□□□ -0.31
ITGA4-201ENST00000233573 UMAD1C9J7I0 102 aa13.12□□□□□ -0.31
ITGA4-201ENST00000233573 PPIHO43447 177 aaKnown RBP13.12□□□□□ -0.31
ITGA4-201ENST00000233573 NDUFB7P17568 137 aa13.12□□□□□ -0.31
ITGA4-201ENST00000233573 SNCAP37840 140 aa13.12□□□□□ -0.31
ITGA4-201ENST00000233573 MEF2CQ06413 473 aaPredicted RBP13.12□□□□□ -0.31
ITGA4-201ENST00000233573 ZNF273Q14593 569 aa13.12□□□□□ -0.31
ITGA4-201ENST00000233573 SP5Q6BEB4 398 aaPredicted RBP13.12□□□□□ -0.31
ITGA4-201ENST00000233573 FLNCQ14315 2725 aa13.12□□□□□ -0.31
ITGA4-201ENST00000233573 RNASEK-C17orf49H0YIS7 233 aa13.12□□□□□ -0.31
ITGA4-201ENST00000233573 AGPAT2O15120 278 aa13.12□□□□□ -0.31
ITGA4-201ENST00000233573 OR9G9P0C7N8 305 aa13.12□□□□□ -0.31
ITGA4-201ENST00000233573 ARHGDIBP52566 201 aa13.12□□□□□ -0.31
ITGA4-201ENST00000233573 ZNF616Q08AN1 781 aa13.12□□□□□ -0.31
ITGA4-201ENST00000233573 SPANXN5Q5MJ07 72 aa13.12□□□□□ -0.31
ITGA4-201ENST00000233573 PRAMEF5Q5TYX0 476 aa13.12□□□□□ -0.31
ITGA4-201ENST00000233573 LYPD2Q6UXB3 125 aa13.12□□□□□ -0.31
ITGA4-201ENST00000233573 COMMD1Q8N668 190 aa13.12□□□□□ -0.31
ITGA4-201ENST00000233573 OR4C12Q96R67 309 aa13.12□□□□□ -0.31
ITGA4-201ENST00000233573 COL12A1Q99715 3063 aa13.12□□□□□ -0.31
ITGA4-201ENST00000233573 C9JQL5 133 aa13.11□□□□□ -0.31
ITGA4-201ENST00000233573 TSPAN15O95858 294 aa13.11□□□□□ -0.31
ITGA4-201ENST00000233573 PRH1P02810 166 aa13.11□□□□□ -0.31
ITGA4-201ENST00000233573 NFYBP25208 207 aa13.11□□□□□ -0.31
ITGA4-201ENST00000233573 KIR2DS2P43631 304 aa13.11□□□□□ -0.31
ITGA4-201ENST00000233573 ZNF672Q499Z4 452 aaPredicted RBP13.11□□□□□ -0.31
ITGA4-201ENST00000233573 SLC25A48Q6ZT89 311 aaKnown RBP13.11□□□□□ -0.31
ITGA4-201ENST00000233573 OR10A7Q8NGE5 316 aa13.11□□□□□ -0.31
ITGA4-201ENST00000233573 TREM1Q9NP99 234 aa13.11□□□□□ -0.31
ITGA4-201ENST00000233573 KAAG1Q9UBP8 84 aa13.11□□□□□ -0.31
ITGA4-201ENST00000233573 PMS2P5A8MQ11 134 aa13.11□□□□□ -0.31
ITGA4-201ENST00000233573 C19orf84I3L1E1 186 aa13.11□□□□□ -0.31
ITGA4-201ENST00000233573 DVL1P1P54792 670 aaPredicted RBP13.11□□□□□ -0.31
ITGA4-201ENST00000233573 HBG1P69891 147 aa13.11□□□□□ -0.31
ITGA4-201ENST00000233573 HBG2P69892 147 aa13.11□□□□□ -0.31
ITGA4-201ENST00000233573 S1PR3Q99500 378 aa13.11□□□□□ -0.31
ITGA4-201ENST00000233573 PARD6GQ9BYG4 376 aaPredicted RBP13.11□□□□□ -0.31
ITGA4-201ENST00000233573 CTSZQ9UBR2 303 aa13.11□□□□□ -0.31
ITGA4-201ENST00000233573 PRELID3BQ9Y3B1 194 aa13.11□□□□□ -0.31
ITGA4-201ENST00000233573 YLPM1P49750 1951 aaKnown RBP13.1□□□□□ -0.31
ITGA4-201ENST00000233573 RPL31P62899 125 aaKnown RBP13.1□□□□□ -0.31
ITGA4-201ENST00000233573 MRPS11P82912 194 aaKnown RBP13.1□□□□□ -0.31
ITGA4-201ENST00000233573 DEFA5Q01523 94 aa13.1□□□□□ -0.31
ITGA4-201ENST00000233573 BTN1A1Q13410 526 aa13.1□□□□□ -0.31
ITGA4-201ENST00000233573 TMEM200BQ69YZ2 307 aa13.1□□□□□ -0.31
ITGA4-201ENST00000233573 MUC15Q8N387 334 aa13.1□□□□□ -0.31
ITGA4-201ENST00000233573 ZNF383Q8NA42 475 aa13.1□□□□□ -0.31
ITGA4-201ENST00000233573 FAM213BQ8TBF2 198 aa13.1□□□□□ -0.31
ITGA4-201ENST00000233573 DTD1Q8TEA8 209 aa13.1□□□□□ -0.31
ITGA4-201ENST00000233573 ZDHHC16Q969W1 377 aa13.1□□□□□ -0.31
ITGA4-201ENST00000233573 TMEM204Q9BSN7 226 aa13.1□□□□□ -0.31
ITGA4-201ENST00000233573 QTRT1Q9BXR0 403 aaKnown RBP13.1□□□□□ -0.31
ITGA4-201ENST00000233573 SEC11CQ9BY50 192 aa13.1□□□□□ -0.31
ITGA4-201ENST00000233573 HIPK2Q9H2X6 1198 aa13.1□□□□□ -0.31
ITGA4-201ENST00000233573 IGHV1-69-2A0A0G2JMI3 117 aa13.09□□□□□ -0.31
ITGA4-201ENST00000233573 IFNA5P01569 189 aa13.09□□□□□ -0.31
ITGA4-201ENST00000233573 OR8U8P0C7N1 319 aa13.09□□□□□ -0.31
ITGA4-201ENST00000233573 ERVFRD-1P60508 538 aa13.09□□□□□ -0.31
ITGA4-201ENST00000233573 GUCA2BQ16661 112 aa13.09□□□□□ -0.31
ITGA4-201ENST00000233573 LRRC75BQ2VPJ9 315 aa13.09□□□□□ -0.31
ITGA4-201ENST00000233573 GAL3ST2Q9H3Q3 398 aa13.09□□□□□ -0.31
ITGA4-201ENST00000233573 F8W036 122 aa13.09□□□□□ -0.31
ITGA4-201ENST00000233573 NQO2P16083 231 aa13.09□□□□□ -0.31
ITGA4-201ENST00000233573 THBS3P49746 956 aa13.09□□□□□ -0.31
ITGA4-201ENST00000233573 GNG10P50151 68 aa13.09□□□□□ -0.31
ITGA4-201ENST00000233573 PDLIM3Q53GG5 364 aaPredicted RBP13.09□□□□□ -0.31
ITGA4-201ENST00000233573 SPSB3Q6PJ21 355 aa13.09□□□□□ -0.31
ITGA4-201ENST00000233573 HEPN1Q6WQI6 88 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms