RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 HLA-DQA1P01909 254 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 IL11P20809 199 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 DAP3P51398 398 aaKnown RBP10.97□□□□□ -0.65
MSH2-201ENST00000233146 RAB31Q13636 194 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 SPANXN5Q5MJ07 72 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 OR1F12Q8NHA8 337 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 PP6455Q8WZ26 134 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 SPATA25Q9BR10 227 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 TIMM29Q9BSF4 260 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 TSSC4Q9Y5U2 329 aaPredicted RBP10.97□□□□□ -0.65
MSH2-201ENST00000233146 SPAG17Q6Q759 2223 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 VCANP13611 3396 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 TMED7-TICAM2A0A0A6YYA0 188 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 IGKV1D-13A0A0B4J2D9 117 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 IGKV1-13P0DP09 117 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 CD38P28907 300 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 TXNDC17Q9BRA2 123 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 TMEM265A0A087WTH1 108 aa10.96□□□□□ -0.65
MSH2-201ENST00000233146 C17orf51A8MQB3 221 aa10.96□□□□□ -0.65
MSH2-201ENST00000233146 ANGPTL7O43827 346 aa10.96□□□□□ -0.65
MSH2-201ENST00000233146 DEFA4P12838 97 aa10.96□□□□□ -0.65
MSH2-201ENST00000233146 TGFBR3Q03167 851 aa10.96□□□□□ -0.65
MSH2-201ENST00000233146 TMEM211Q6ICI0 200 aa10.96□□□□□ -0.65
MSH2-201ENST00000233146 PNRC2Q9NPJ4 139 aaKnown RBP10.96□□□□□ -0.65
MSH2-201ENST00000233146 C5orf42Q9H799 3197 aa10.96□□□□□ -0.66
MSH2-201ENST00000233146 H3BUT2 72 aa10.96□□□□□ -0.66
MSH2-201ENST00000233146 FTH1P19P0C7X4 201 aa10.96□□□□□ -0.66
MSH2-201ENST00000233146 MEF2CQ06413 473 aaPredicted RBP10.96□□□□□ -0.66
MSH2-201ENST00000233146 MTURNQ8N3F0 131 aa10.96□□□□□ -0.66
MSH2-201ENST00000233146 CCL28Q9NRJ3 127 aa10.96□□□□□ -0.66
MSH2-201ENST00000233146 MED29Q9NX70 200 aa10.96□□□□□ -0.66
MSH2-201ENST00000233146 CACNG5Q9UF02 275 aa10.96□□□□□ -0.66
MSH2-201ENST00000233146 WNT6Q9Y6F9 365 aa10.96□□□□□ -0.66
MSH2-201ENST00000233146 SCO2A0A1W2PP80 73 aa10.96□□□□□ -0.66
MSH2-201ENST00000233146 SPINK4O60575 86 aa10.96□□□□□ -0.66
MSH2-201ENST00000233146 AMY1AP04745 511 aa10.96□□□□□ -0.66
MSH2-201ENST00000233146 GP1BBP13224 206 aa10.96□□□□□ -0.66
MSH2-201ENST00000233146 RPL24P83731 157 aaKnown RBP10.96□□□□□ -0.66
MSH2-201ENST00000233146 FUT7Q11130 342 aa10.96□□□□□ -0.66
MSH2-201ENST00000233146 SLC23A3Q6PIS1 610 aa10.96□□□□□ -0.66
MSH2-201ENST00000233146 TMEM14EPQ6UXP3 125 aa10.96□□□□□ -0.66
MSH2-201ENST00000233146 DTX1Q86Y01 620 aa10.96□□□□□ -0.66
MSH2-201ENST00000233146 OR10AG1Q8NH19 301 aa10.96□□□□□ -0.66
MSH2-201ENST00000233146 LSM10Q969L4 123 aaKnown RBP10.96□□□□□ -0.66
MSH2-201ENST00000233146 PERPQ96FX8 193 aa10.96□□□□□ -0.66
MSH2-201ENST00000233146 THADAQ6YHU6 1953 aa10.95□□□□□ -0.66
MSH2-201ENST00000233146 PGLYRP1O75594 196 aaPredicted RBP10.95□□□□□ -0.66
MSH2-201ENST00000233146 DRD1P21728 446 aa10.95□□□□□ -0.66
MSH2-201ENST00000233146 PPOXP50336 477 aa10.95□□□□□ -0.66
MSH2-201ENST00000233146 MYO7AQ13402 2215 aa10.95□□□□□ -0.66
MSH2-201ENST00000233146 SLC35E4Q6ICL7 350 aa10.95□□□□□ -0.66
MSH2-201ENST00000233146 LY96Q9Y6Y9 160 aa10.95□□□□□ -0.66
MSH2-201ENST00000233146 KLRC4-KLRK1H3BQV0 150 aa10.95□□□□□ -0.66
MSH2-201ENST00000233146 CCNOP22674 350 aa10.95□□□□□ -0.66
MSH2-201ENST00000233146 F2RP25116 425 aa10.95□□□□□ -0.66
MSH2-201ENST00000233146 LY6G5CQ5SRR4 150 aa10.95□□□□□ -0.66
MSH2-201ENST00000233146 Q6ZSR6 202 aa10.95□□□□□ -0.66
MSH2-201ENST00000233146 C2orf91Q6ZV80 131 aa10.95□□□□□ -0.66
MSH2-201ENST00000233146 VSTM2AQ8TAG5 236 aa10.95□□□□□ -0.66
MSH2-201ENST00000233146 WDR54Q9H977 334 aa10.95□□□□□ -0.66
MSH2-201ENST00000233146 NPIPB13A6NJU9 1138 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 NPIPB4C9JG80 1138 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 SPRY1O43609 319 aaPredicted RBP10.94□□□□□ -0.66
MSH2-201ENST00000233146 DHRS3O75911 302 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 APCSP02743 223 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 TMEM97Q5BJF2 176 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 BLNKQ8WV28 456 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 RERGQ96A58 199 aaPredicted RBP10.94□□□□□ -0.66
MSH2-201ENST00000233146 ELSPBP1Q96BH3 223 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 LINC00470Q9BZP3 86 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 CD300LBA8K4G0 201 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 OR11H12B2RN74 326 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 RER1O15258 196 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 CLPSP04118 112 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 CISD3P0C7P0 127 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 HTR1DP28221 377 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 PIGYQ3MUY2 71 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 TCEAL8Q8IYN2 117 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 OR11H1Q8NG94 326 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 OR11H2Q8NH07 326 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 ZFYVE21Q9BQ24 234 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 XIRP2A4UGR9 3374 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 PIGBOS1A0A0B4J2F0 54 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 A0A0G2JLM5 398 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 TUSC2O75896 110 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 CEBPDP49716 269 aaPredicted RBP10.94□□□□□ -0.66
MSH2-201ENST00000233146 CEACAM21Q3KPI0 293 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 FOXI2Q6ZQN5 318 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 OR1L1Q8NH94 360 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 TMEM147Q9BVK8 224 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 NPCDR1Q9BY65 106 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 TNFRSF19Q9NS68 423 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 TECRQ9NZ01 308 aaKnown RBP10.94□□□□□ -0.66
MSH2-201ENST00000233146 PIGLQ9Y2B2 252 aa10.94□□□□□ -0.66
MSH2-201ENST00000233146 ANKRD30BLA7E2S9 258 aa10.93□□□□□ -0.66
MSH2-201ENST00000233146 FOXE3Q13461 319 aa10.93□□□□□ -0.66
MSH2-201ENST00000233146 KLF5Q13887 457 aaPredicted RBP10.93□□□□□ -0.66
MSH2-201ENST00000233146 BAHD1Q8TBE0 780 aaPredicted RBP10.93□□□□□ -0.66
MSH2-201ENST00000233146 RAB1CQ92928 201 aa10.93□□□□□ -0.66
MSH2-201ENST00000233146 MS4A6AQ9H2W1 248 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms