RNA–Protein interactions for RNA: ENST00000230418.8

PTK7-201, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 3,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-201ENST00000230418 DUXBA0A1W2PPF3 345 aa12.11□□□□□ -0.47
PTK7-201ENST00000230418 IGHG3P01860 377 aa12.11□□□□□ -0.47
PTK7-201ENST00000230418 IL3RAP26951 378 aa12.11□□□□□ -0.47
PTK7-201ENST00000230418 CDC34P49427 236 aaPredicted RBP12.11□□□□□ -0.47
PTK7-201ENST00000230418 ASCL4Q6XD76 172 aa12.11□□□□□ -0.47
PTK7-201ENST00000230418 PIP4P1Q86T03 277 aa12.11□□□□□ -0.47
PTK7-201ENST00000230418 PFDN5Q99471 154 aa12.11□□□□□ -0.47
PTK7-201ENST00000230418 MDFIC2A0A1B0GVS7 189 aa12.11□□□□□ -0.47
PTK7-201ENST00000230418 ZNF705GA8MUZ8 300 aaPredicted RBP12.11□□□□□ -0.47
PTK7-201ENST00000230418 H3BQ15 152 aa12.11□□□□□ -0.47
PTK7-201ENST00000230418 HTD2P86397 168 aa12.11□□□□□ -0.47
PTK7-201ENST00000230418 SMUG1Q53HV7 270 aa12.11□□□□□ -0.47
PTK7-201ENST00000230418 CSPG4Q6UVK1 2322 aa12.11□□□□□ -0.47
PTK7-201ENST00000230418 COMMD1Q8N668 190 aa12.11□□□□□ -0.47
PTK7-201ENST00000230418 C1orf162Q8NEQ5 155 aaPredicted RBP12.11□□□□□ -0.47
PTK7-201ENST00000230418 QTRT1Q9BXR0 403 aaKnown RBP12.11□□□□□ -0.47
PTK7-201ENST00000230418 J3QW42 95 aa12.1□□□□□ -0.47
PTK7-201ENST00000230418 PAGE4O60829 102 aa12.1□□□□□ -0.47
PTK7-201ENST00000230418 CCL3L1P16619 93 aa12.1□□□□□ -0.47
PTK7-201ENST00000230418 CHRNA7P36544 502 aa12.1□□□□□ -0.47
PTK7-201ENST00000230418 OPRK1P41145 380 aa12.1□□□□□ -0.47
PTK7-201ENST00000230418 RND3P61587 244 aa12.1□□□□□ -0.47
PTK7-201ENST00000230418 RPL30P62888 115 aaKnown RBP12.1□□□□□ -0.47
PTK7-201ENST00000230418 USF2Q15853 346 aaPredicted RBP12.1□□□□□ -0.47
PTK7-201ENST00000230418 Q6P435 159 aa12.1□□□□□ -0.47
PTK7-201ENST00000230418 UHRF2Q96PU4 802 aa12.1□□□□□ -0.47
PTK7-201ENST00000230418 Q6ZRM9 215 aa12.1□□□□□ -0.47
PTK7-201ENST00000230418 TMEM56Q96MV1 263 aa12.1□□□□□ -0.47
PTK7-201ENST00000230418 TMPRSS5Q9H3S3 457 aa12.1□□□□□ -0.47
PTK7-201ENST00000230418 LPAR2Q9HBW0 351 aa12.1□□□□□ -0.47
PTK7-201ENST00000230418 TMEM56-RWDD3S4R434 201 aa12.1□□□□□ -0.47
PTK7-201ENST00000230418 A8MXE2 369 aa12.1□□□□□ -0.47
PTK7-201ENST00000230418 CCL20P78556 96 aa12.1□□□□□ -0.47
PTK7-201ENST00000230418 ZBTB34Q8NCN2 500 aa12.1□□□□□ -0.47
PTK7-201ENST00000230418 MISP3Q96FF7 219 aa12.1□□□□□ -0.47
PTK7-201ENST00000230418 MS4A5Q9H3V2 200 aa12.1□□□□□ -0.47
PTK7-201ENST00000230418 DCAF16Q9NXF7 216 aa12.1□□□□□ -0.47
PTK7-201ENST00000230418 RAB29O14966 203 aa12.09□□□□□ -0.47
PTK7-201ENST00000230418 SPINK4O60575 86 aa12.09□□□□□ -0.47
PTK7-201ENST00000230418 MMP9P14780 707 aa12.09□□□□□ -0.47
PTK7-201ENST00000230418 DLK1P80370 383 aa12.09□□□□□ -0.47
PTK7-201ENST00000230418 SSC4DQ8WTU2 575 aa12.09□□□□□ -0.47
PTK7-201ENST00000230418 TMEM140Q9NV12 185 aa12.09□□□□□ -0.47
PTK7-201ENST00000230418 SLC25A15Q9Y619 301 aa12.09□□□□□ -0.47
PTK7-201ENST00000230418 FLI1Q01543 452 aaPredicted RBP12.09□□□□□ -0.47
PTK7-201ENST00000230418 Q6ZR03 302 aa12.09□□□□□ -0.47
PTK7-201ENST00000230418 CD177Q8N6Q3 437 aa12.09□□□□□ -0.47
PTK7-201ENST00000230418 TAF15Q92804 592 aaKnown RBP eCLIP12.09□□□□□ -0.47
PTK7-201ENST00000230418 BTBD17A6NE02 478 aa12.09□□□□□ -0.47
PTK7-201ENST00000230418 J3QR06 171 aa12.09□□□□□ -0.47
PTK7-201ENST00000230418 SPP1P10451 314 aa12.09□□□□□ -0.47
PTK7-201ENST00000230418 C9orf152Q5JTZ5 239 aa12.09□□□□□ -0.47
PTK7-201ENST00000230418 NANPQ8TBE9 248 aa12.09□□□□□ -0.47
PTK7-201ENST00000230418 MBP02144 154 aa12.08□□□□□ -0.48
PTK7-201ENST00000230418 PRSS33Q8NF86 280 aa12.08□□□□□ -0.48
PTK7-201ENST00000230418 OR4D5Q8NGN0 318 aa12.08□□□□□ -0.48
PTK7-201ENST00000230418 RPEQ96AT9 228 aa12.08□□□□□ -0.48
PTK7-201ENST00000230418 USB1Q9BQ65 265 aaKnown RBP12.08□□□□□ -0.48
PTK7-201ENST00000230418 HPRT1P00492 218 aa12.08□□□□□ -0.48
PTK7-201ENST00000230418 NPY1RP25929 384 aa12.08□□□□□ -0.48
PTK7-201ENST00000230418 PRR27Q6MZM9 219 aa12.08□□□□□ -0.48
PTK7-201ENST00000230418 DOLPP1Q86YN1 238 aa12.08□□□□□ -0.48
PTK7-201ENST00000230418 TGIF2LYQ8IUE0 185 aa12.08□□□□□ -0.48
PTK7-201ENST00000230418 TGIF2LXQ8IUE1 241 aa12.08□□□□□ -0.48
PTK7-201ENST00000230418 COQ2Q96H96 371 aa12.08□□□□□ -0.48
PTK7-201ENST00000230418 TNCP24821 2201 aa12.08□□□□□ -0.48
PTK7-201ENST00000230418 ARHGAP21Q5T5U3 1957 aa12.08□□□□□ -0.48
PTK7-201ENST00000230418 TCF15Q12870 199 aa12.08□□□□□ -0.48
PTK7-201ENST00000230418 MRPL41Q8IXM3 137 aaKnown RBP12.08□□□□□ -0.48
PTK7-201ENST00000230418 OR13D1Q8NGV5 346 aa12.08□□□□□ -0.48
PTK7-201ENST00000230418 PPP5D1E7EU14 171 aa12.07□□□□□ -0.48
PTK7-201ENST00000230418 K7N7A8 449 aa12.07□□□□□ -0.48
PTK7-201ENST00000230418 DVL1O14640 695 aa12.07□□□□□ -0.48
PTK7-201ENST00000230418 TMEM11P17152 192 aa12.07□□□□□ -0.48
PTK7-201ENST00000230418 ZNF146Q15072 292 aa12.07□□□□□ -0.48
PTK7-201ENST00000230418 FAM78BQ5VT40 261 aa12.07□□□□□ -0.48
PTK7-201ENST00000230418 MIC13Q5XKP0 118 aa12.07□□□□□ -0.48
PTK7-201ENST00000230418 ACSM6Q6P461 480 aa12.07□□□□□ -0.48
PTK7-201ENST00000230418 ZNF880Q6PDB4 577 aa12.07□□□□□ -0.48
PTK7-201ENST00000230418 PCSK4Q6UW60 755 aa12.07□□□□□ -0.48
PTK7-201ENST00000230418 Q6ZS92 163 aa12.07□□□□□ -0.48
PTK7-201ENST00000230418 GCSAMQ8N6F7 178 aa12.07□□□□□ -0.48
PTK7-201ENST00000230418 TMEM171Q8WVE6 324 aa12.07□□□□□ -0.48
PTK7-201ENST00000230418 NIT2Q9NQR4 276 aa12.07□□□□□ -0.48
PTK7-201ENST00000230418 TNFSF13O75888 250 aa12.07□□□□□ -0.48
PTK7-201ENST00000230418 IGKV3-15P01624 115 aa12.07□□□□□ -0.48
PTK7-201ENST00000230418 CD1BP29016 333 aa12.07□□□□□ -0.48
PTK7-201ENST00000230418 CHRNB4P30926 498 aa12.07□□□□□ -0.48
PTK7-201ENST00000230418 TNXAQ16473 311 aa12.07□□□□□ -0.48
PTK7-201ENST00000230418 LILRB1Q8NHL6 650 aaPredicted RBP12.07□□□□□ -0.48
PTK7-201ENST00000230418 ZNF714Q96N38 554 aa12.07□□□□□ -0.48
PTK7-201ENST00000230418 NCBP2LA6PVI3 153 aaKnown RBP12.07□□□□□ -0.48
PTK7-201ENST00000230418 IGKV1-5P01602 117 aa12.07□□□□□ -0.48
PTK7-201ENST00000230418 ID3Q02535 119 aa12.07□□□□□ -0.48
PTK7-201ENST00000230418 OR10A7Q8NGE5 316 aa12.07□□□□□ -0.48
PTK7-201ENST00000230418 CEACAM18A8MTB9 384 aa12.06□□□□□ -0.48
PTK7-201ENST00000230418 GLRX5Q86SX6 157 aa12.06□□□□□ -0.48
PTK7-201ENST00000230418 TPPP3Q9BW30 176 aa12.06□□□□□ -0.48
PTK7-201ENST00000230418 ZNRD1Q9P1U0 126 aa12.06□□□□□ -0.48
PTK7-201ENST00000230418 ANAPC10Q9UM13 185 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms