RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 MED12LQ86YW9 2145 aa11.72□□□□□ -0.53
SCNN1A-201ENST00000228916 PINLYPA6NC86 204 aa11.72□□□□□ -0.53
SCNN1A-201ENST00000228916 RANP62826 216 aaKnown RBP11.72□□□□□ -0.53
SCNN1A-201ENST00000228916 GCSAMLQ5JQS6 135 aa11.72□□□□□ -0.53
SCNN1A-201ENST00000228916 TXNDC17Q9BRA2 123 aa11.72□□□□□ -0.53
SCNN1A-201ENST00000228916 LPAR2Q9HBW0 351 aa11.72□□□□□ -0.53
SCNN1A-201ENST00000228916 RYDENQ9NUL5 291 aaKnown RBP11.72□□□□□ -0.53
SCNN1A-201ENST00000228916 TRAV38-1A0A0B4J264 116 aa11.71□□□□□ -0.53
SCNN1A-201ENST00000228916 RAB29O14966 203 aa11.71□□□□□ -0.53
SCNN1A-201ENST00000228916 WISP2O76076 250 aa11.71□□□□□ -0.53
SCNN1A-201ENST00000228916 BMP5P22003 454 aa11.71□□□□□ -0.53
SCNN1A-201ENST00000228916 TIMP3P35625 211 aa11.71□□□□□ -0.53
SCNN1A-201ENST00000228916 ARR3P36575 388 aa11.71□□□□□ -0.53
SCNN1A-201ENST00000228916 ERVK11-1P61568 191 aa11.71□□□□□ -0.53
SCNN1A-201ENST00000228916 TMEM183BQ1AE95 376 aa11.71□□□□□ -0.53
SCNN1A-201ENST00000228916 LYSMD4Q5XG99 296 aa11.71□□□□□ -0.53
SCNN1A-201ENST00000228916 COL6A3P12111 3177 aa11.71□□□□□ -0.53
SCNN1A-201ENST00000228916 GTF3C1Q12789 2109 aa11.71□□□□□ -0.53
SCNN1A-201ENST00000228916 TRAV9-1A0A075B6T8 112 aa11.71□□□□□ -0.53
SCNN1A-201ENST00000228916 CLDN14O95500 239 aa11.71□□□□□ -0.53
SCNN1A-201ENST00000228916 KITLGP21583 273 aa11.71□□□□□ -0.53
SCNN1A-201ENST00000228916 CA6P23280 308 aa11.71□□□□□ -0.53
SCNN1A-201ENST00000228916 GDF1P27539 372 aa11.71□□□□□ -0.53
SCNN1A-201ENST00000228916 IGFBP7Q16270 282 aa11.71□□□□□ -0.53
SCNN1A-201ENST00000228916 OR2D2Q9H210 308 aa11.71□□□□□ -0.53
SCNN1A-201ENST00000228916 C15orf62A8K5M9 175 aa11.71□□□□□ -0.54
SCNN1A-201ENST00000228916 MRPS11P82912 194 aaKnown RBP11.71□□□□□ -0.54
SCNN1A-201ENST00000228916 C17orf98A8MV24 154 aa11.7□□□□□ -0.54
SCNN1A-201ENST00000228916 SERF1AO75920 110 aa11.7□□□□□ -0.54
SCNN1A-201ENST00000228916 TNFSF10P50591 281 aa11.7□□□□□ -0.54
SCNN1A-201ENST00000228916 WDR86Q86TI4 376 aa11.7□□□□□ -0.54
SCNN1A-201ENST00000228916 Q8IYB0 196 aa11.7□□□□□ -0.54
SCNN1A-201ENST00000228916 OR10G8Q8NGN5 311 aa11.7□□□□□ -0.54
SCNN1A-201ENST00000228916 HSPB9Q9BQS6 159 aa11.7□□□□□ -0.54
SCNN1A-201ENST00000228916 IL6RP08887 468 aaPredicted RBP11.7□□□□□ -0.54
SCNN1A-201ENST00000228916 CRISP2P16562 243 aa11.7□□□□□ -0.54
SCNN1A-201ENST00000228916 CBLN1P23435 193 aa11.7□□□□□ -0.54
SCNN1A-201ENST00000228916 CDKN1AP38936 164 aa11.7□□□□□ -0.54
SCNN1A-201ENST00000228916 FOLR3P41439 243 aa11.7□□□□□ -0.54
SCNN1A-201ENST00000228916 COMPP49747 757 aaPredicted RBP11.7□□□□□ -0.54
SCNN1A-201ENST00000228916 CATR1Q13166 79 aa11.7□□□□□ -0.54
SCNN1A-201ENST00000228916 ARSJQ5FYB0 599 aaPredicted RBP11.7□□□□□ -0.54
SCNN1A-201ENST00000228916 TUSC5Q8IXB3 177 aa11.7□□□□□ -0.54
SCNN1A-201ENST00000228916 GMPPAQ96IJ6 420 aaPredicted RBP11.7□□□□□ -0.54
SCNN1A-201ENST00000228916 OR2J1Q9GZK6 312 aa11.7□□□□□ -0.54
SCNN1A-201ENST00000228916 CBY1Q9Y3M2 126 aa11.7□□□□□ -0.54
SCNN1A-201ENST00000228916 ZNF146Q15072 292 aa11.69□□□□□ -0.54
SCNN1A-201ENST00000228916 OCC1Q8TAD7 63 aa11.69□□□□□ -0.54
SCNN1A-201ENST00000228916 VAMP8Q9BV40 100 aa11.69□□□□□ -0.54
SCNN1A-201ENST00000228916 PATZ1Q9HBE1 687 aaKnown RBP11.69□□□□□ -0.54
SCNN1A-201ENST00000228916 PAM16Q9Y3D7 125 aa11.69□□□□□ -0.54
SCNN1A-201ENST00000228916 A0A1W2PPV4 95 aa11.69□□□□□ -0.54
SCNN1A-201ENST00000228916 SELEP16581 610 aa11.69□□□□□ -0.54
SCNN1A-201ENST00000228916 CD1BP29016 333 aa11.69□□□□□ -0.54
SCNN1A-201ENST00000228916 PLP2Q04941 152 aa11.69□□□□□ -0.54
SCNN1A-201ENST00000228916 ZNF808Q8N4W9 903 aaPredicted RBP11.69□□□□□ -0.54
SCNN1A-201ENST00000228916 RAC2P15153 192 aa11.69□□□□□ -0.54
SCNN1A-201ENST00000228916 H2BFWTQ7Z2G1 175 aa11.69□□□□□ -0.54
SCNN1A-201ENST00000228916 LRP11Q86VZ4 500 aa11.69□□□□□ -0.54
SCNN1A-201ENST00000228916 TCTEX1D1Q8N7M0 179 aa11.69□□□□□ -0.54
SCNN1A-201ENST00000228916 OR5AU1Q8NGC0 362 aa11.69□□□□□ -0.54
SCNN1A-201ENST00000228916 QTRT1Q9BXR0 403 aaKnown RBP11.69□□□□□ -0.54
SCNN1A-201ENST00000228916 MRPL18Q9H0U6 180 aaKnown RBP11.69□□□□□ -0.54
SCNN1A-201ENST00000228916 IL36BQ9NZH7 164 aa11.69□□□□□ -0.54
SCNN1A-201ENST00000228916 PCSK5Q92824 1860 aa11.68□□□□□ -0.54
SCNN1A-201ENST00000228916 SCO2A0A1W2PP80 73 aa11.68□□□□□ -0.54
SCNN1A-201ENST00000228916 NEURL1O76050 574 aa11.68□□□□□ -0.54
SCNN1A-201ENST00000228916 STAG3L2P0CL84 134 aa11.68□□□□□ -0.54
SCNN1A-201ENST00000228916 STAG3L3P0CL85 134 aa11.68□□□□□ -0.54
SCNN1A-201ENST00000228916 OTX2P32243 289 aa11.68□□□□□ -0.54
SCNN1A-201ENST00000228916 EDDM3BP56851 147 aa11.68□□□□□ -0.54
SCNN1A-201ENST00000228916 SRYQ05066 204 aa11.68□□□□□ -0.54
SCNN1A-201ENST00000228916 Q0VG73 95 aa11.68□□□□□ -0.54
SCNN1A-201ENST00000228916 SPINK9Q5DT21 86 aa11.68□□□□□ -0.54
SCNN1A-201ENST00000228916 SCCPDHQ8NBX0 429 aa11.68□□□□□ -0.54
SCNN1A-201ENST00000228916 RTL8AQ9BWD3 113 aa11.68□□□□□ -0.54
SCNN1A-201ENST00000228916 ARL14EPLP0DKL9 152 aa11.68□□□□□ -0.54
SCNN1A-201ENST00000228916 ZNF90Q03938 601 aa11.68□□□□□ -0.54
SCNN1A-201ENST00000228916 PPP1R32Q7Z5V6 425 aa11.68□□□□□ -0.54
SCNN1A-201ENST00000228916 VN1R17PQ8TDU5 208 aa11.68□□□□□ -0.54
SCNN1A-201ENST00000228916 HLA-CQ95604 372 aa11.68□□□□□ -0.54
SCNN1A-201ENST00000228916 GALMQ96C23 342 aa11.68□□□□□ -0.54
SCNN1A-201ENST00000228916 POLDIP2Q9Y2S7 368 aa11.68□□□□□ -0.54
SCNN1A-201ENST00000228916 DOCK10Q96BY6 2186 aa11.67□□□□□ -0.54
SCNN1A-201ENST00000228916 C12orf77C9JDV5 145 aa11.67□□□□□ -0.54
SCNN1A-201ENST00000228916 SH2D1BO14796 132 aa11.67□□□□□ -0.54
SCNN1A-201ENST00000228916 MPDU1O75352 247 aa11.67□□□□□ -0.54
SCNN1A-201ENST00000228916 FAM53AQ6NSI3 398 aaPredicted RBP11.67□□□□□ -0.54
SCNN1A-201ENST00000228916 KCNIP1Q9NZI2 227 aa11.67□□□□□ -0.54
SCNN1A-201ENST00000228916 DOCK7Q96N67 2140 aa11.67□□□□□ -0.54
SCNN1A-201ENST00000228916 OPRK1P41145 380 aa11.67□□□□□ -0.54
SCNN1A-201ENST00000228916 PILRBQ9UKJ0 227 aa11.67□□□□□ -0.54
SCNN1A-201ENST00000228916 NTN3O00634 580 aaPredicted RBP11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 CELA3AP09093 270 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 THBS3P49746 956 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 LGALS4P56470 323 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 SPINK14Q6IE38 97 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 OR52L2PQ8NGH6 319 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 TAAR6Q96RI8 345 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 GP6Q9HCN6 339 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms