RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 ZNF718Q3SXZ3 478 aa20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 AARDQ4LEZ3 155 aa20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 DNLZQ5SXM8 178 aa20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 MBNL2Q5VZF2 373 aaKnown RBP20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 WDR25Q64LD2 544 aaPredicted RBP20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 ZNF343Q6P1L6 599 aa20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 ZNF474Q6S9Z5 364 aaPredicted RBP20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 WDR82Q6UXN9 313 aa20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 CYP2G1PQ6ZSU1 146 aa20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 FAM90A1Q86YD7 464 aa20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 OR52L2PQ8NGH6 319 aa20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 ACTR3CQ9C0K3 210 aaPredicted RBP20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 ATRXP46100 2492 aa20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 SPTA1P02549 2419 aa20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 CYB5BO43169 146 aa20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 KRASP01116 189 aa20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 S100A2P29034 98 aa20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 G6PCP35575 357 aa20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 CASP6P55212 293 aa20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 MEF2BQ02080 365 aaPredicted RBP20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 SSX7Q7RTT5 188 aa20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 H2BFWTQ7Z2G1 175 aa20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 RPP25LQ8N5L8 163 aaKnown RBP20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 DTD1Q8TEA8 209 aa20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 VKORC1Q9BQB6 163 aa20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 INTS1Q8N201 2190 aaKnown RBP20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 TGIF2-C20orf24A0A0A6YYL0 155 aa20.75■□□□□ 0.91
RUNDC3A-201ENST00000225441 TRGV8A0A0C4DH27 118 aa20.75■□□□□ 0.91
RUNDC3A-201ENST00000225441 C17orf112F2Z3M2 114 aa20.75■□□□□ 0.91
RUNDC3A-201ENST00000225441 SPINT2O43291 252 aa20.75■□□□□ 0.91
RUNDC3A-201ENST00000225441 RAMP3O60896 148 aa20.75■□□□□ 0.91
RUNDC3A-201ENST00000225441 CD81P60033 236 aa20.75■□□□□ 0.91
RUNDC3A-201ENST00000225441 TMEM249Q2WGJ8 235 aa20.75■□□□□ 0.91
RUNDC3A-201ENST00000225441 OR8G2PQ6IF36 304 aa20.75■□□□□ 0.91
RUNDC3A-201ENST00000225441 UBALD1Q8TB05 177 aa20.75■□□□□ 0.91
RUNDC3A-201ENST00000225441 EDARADDQ8WWZ3 215 aa20.75■□□□□ 0.91
RUNDC3A-201ENST00000225441 C5orf30Q96GV9 206 aa20.75■□□□□ 0.91
RUNDC3A-201ENST00000225441 GAR1Q9NY12 217 aaKnown RBP20.75■□□□□ 0.91
RUNDC3A-201ENST00000225441 TIMM8AO60220 97 aaPredicted RBP20.74■□□□□ 0.91
RUNDC3A-201ENST00000225441 S1PR2O95136 353 aa20.74■□□□□ 0.91
RUNDC3A-201ENST00000225441 IGLV1-44P01699 117 aa20.74■□□□□ 0.91
RUNDC3A-201ENST00000225441 BMP5P22003 454 aa20.74■□□□□ 0.91
RUNDC3A-201ENST00000225441 FGF8P55075 233 aaPredicted RBP20.74■□□□□ 0.91
RUNDC3A-201ENST00000225441 NDUFA6P56556 154 aa20.74■□□□□ 0.91
RUNDC3A-201ENST00000225441 AESQ08117 197 aa20.74■□□□□ 0.91
RUNDC3A-201ENST00000225441 KBTBD11O94819 623 aa20.74■□□□□ 0.91
RUNDC3A-201ENST00000225441 MDKP21741 143 aaPredicted RBP20.74■□□□□ 0.91
RUNDC3A-201ENST00000225441 GCH1P30793 250 aa20.74■□□□□ 0.91
RUNDC3A-201ENST00000225441 CA7P43166 264 aa20.74■□□□□ 0.91
RUNDC3A-201ENST00000225441 GABRA2P47869 451 aa20.74■□□□□ 0.91
RUNDC3A-201ENST00000225441 ELLP55199 621 aaPredicted RBP20.74■□□□□ 0.91
RUNDC3A-201ENST00000225441 TMEM241Q24JQ0 296 aa20.74■□□□□ 0.91
RUNDC3A-201ENST00000225441 BHLHA15Q7RTS1 189 aaPredicted RBP20.74■□□□□ 0.91
RUNDC3A-201ENST00000225441 ZNF709Q8N972 641 aa20.74■□□□□ 0.91
RUNDC3A-201ENST00000225441 C17orf98A8MV24 154 aa20.73■□□□□ 0.91
RUNDC3A-201ENST00000225441 HIST1H2BKO60814 126 aa20.73■□□□□ 0.91
RUNDC3A-201ENST00000225441 HIST1H2BJP06899 126 aa20.73■□□□□ 0.91
RUNDC3A-201ENST00000225441 HIST1H2BOP23527 126 aa20.73■□□□□ 0.91
RUNDC3A-201ENST00000225441 HIST1H2BBP33778 126 aa20.73■□□□□ 0.91
RUNDC3A-201ENST00000225441 CEBPDP49716 269 aaPredicted RBP20.73■□□□□ 0.91
RUNDC3A-201ENST00000225441 HIST1H2BDP58876 126 aa20.73■□□□□ 0.91
RUNDC3A-201ENST00000225441 HIST1H2BCP62807 126 aa20.73■□□□□ 0.91
RUNDC3A-201ENST00000225441 ZNF816Q0VGE8 651 aaPredicted RBP20.73■□□□□ 0.91
RUNDC3A-201ENST00000225441 HIST2H2BEQ16778 126 aa20.73■□□□□ 0.91
RUNDC3A-201ENST00000225441 HIST2H2BFQ5QNW6 126 aaPredicted RBP20.73■□□□□ 0.91
RUNDC3A-201ENST00000225441 NCMAPQ5T1S8 102 aa20.73■□□□□ 0.91
RUNDC3A-201ENST00000225441 HIST1H2BHQ93079 126 aa20.73■□□□□ 0.91
RUNDC3A-201ENST00000225441 DIRC2Q96SL1 478 aa20.73■□□□□ 0.91
RUNDC3A-201ENST00000225441 HIST1H2BNQ99877 126 aa20.73■□□□□ 0.91
RUNDC3A-201ENST00000225441 HIST1H2BMQ99879 126 aa20.73■□□□□ 0.91
RUNDC3A-201ENST00000225441 URGCP-MRPS24S4R325 110 aa20.73■□□□□ 0.91
RUNDC3A-201ENST00000225441 A8MXE2 369 aa20.72■□□□□ 0.91
RUNDC3A-201ENST00000225441 GZMHP20718 246 aa20.72■□□□□ 0.91
RUNDC3A-201ENST00000225441 FGF7P21781 194 aa20.72■□□□□ 0.91
RUNDC3A-201ENST00000225441 BRWD1-AS2P59051 145 aa20.72■□□□□ 0.91
RUNDC3A-201ENST00000225441 RPP30P78346 268 aaKnown RBP20.72■□□□□ 0.91
RUNDC3A-201ENST00000225441 NKX6-1P78426 367 aaPredicted RBP20.72■□□□□ 0.91
RUNDC3A-201ENST00000225441 OR10G9Q8NGN4 311 aa20.72■□□□□ 0.91
RUNDC3A-201ENST00000225441 OR10G7Q8NGN6 311 aa20.72■□□□□ 0.91
RUNDC3A-201ENST00000225441 PPP1R35Q8TAP8 253 aa20.72■□□□□ 0.91
RUNDC3A-201ENST00000225441 MIOXQ9UGB7 285 aa20.72■□□□□ 0.91
RUNDC3A-201ENST00000225441 SMCO3A2RU48 225 aa20.71■□□□□ 0.91
RUNDC3A-201ENST00000225441 WNT9BO14905 357 aa20.71■□□□□ 0.91
RUNDC3A-201ENST00000225441 COL10A1Q03692 680 aa20.71■□□□□ 0.91
RUNDC3A-201ENST00000225441 CR1LQ2VPA4 569 aa20.71■□□□□ 0.91
RUNDC3A-201ENST00000225441 ACSM6Q6P461 480 aa20.71■□□□□ 0.91
RUNDC3A-201ENST00000225441 ZNF808Q8N4W9 903 aaPredicted RBP20.71■□□□□ 0.91
RUNDC3A-201ENST00000225441 MRGPRDQ8TDS7 321 aa20.71■□□□□ 0.91
RUNDC3A-201ENST00000225441 RND1Q92730 232 aa20.71■□□□□ 0.91
RUNDC3A-201ENST00000225441 SMIM7Q9BQ49 75 aa20.71■□□□□ 0.91
RUNDC3A-201ENST00000225441 GGACTQ9BVM4 153 aa20.71■□□□□ 0.91
RUNDC3A-201ENST00000225441 TPRP12270 2363 aaKnown RBP20.71■□□□□ 0.91
RUNDC3A-201ENST00000225441 CFHR2P36980 270 aa20.71■□□□□ 0.91
RUNDC3A-201ENST00000225441 NCR3LG1Q68D85 454 aa20.71■□□□□ 0.91
RUNDC3A-201ENST00000225441 ZNF826PQ6ZT77 177 aa20.71■□□□□ 0.91
RUNDC3A-201ENST00000225441 PYGO2Q9BRQ0 406 aa20.71■□□□□ 0.91
RUNDC3A-201ENST00000225441 CLN8Q9UBY8 286 aa20.71■□□□□ 0.91
RUNDC3A-201ENST00000225441 PPP1R2P9O14990 202 aa20.7■□□□□ 0.9
RUNDC3A-201ENST00000225441 RBFOX2O43251 390 aaKnown RBP eCLIP20.7■□□□□ 0.9
RUNDC3A-201ENST00000225441 IGKV1D-33P01593 117 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms