RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 TCAPO15273 167 aa11.45□□□□□ -0.58
RAB3D-201ENST00000222120 SERF2P84101 59 aa11.45□□□□□ -0.58
RAB3D-201ENST00000222120 TMEM18Q96B42 140 aa11.45□□□□□ -0.58
RAB3D-201ENST00000222120 TMEM50AO95807 157 aa11.45□□□□□ -0.58
RAB3D-201ENST00000222120 HSPB1P04792 205 aaKnown RBP11.45□□□□□ -0.58
RAB3D-201ENST00000222120 SRP19P09132 144 aaKnown RBP11.45□□□□□ -0.58
RAB3D-201ENST00000222120 BAGE3Q86Y29 109 aa11.45□□□□□ -0.58
RAB3D-201ENST00000222120 BAGE2Q86Y30 109 aa11.45□□□□□ -0.58
RAB3D-201ENST00000222120 PTBP3O95758 552 aaKnown RBP11.45□□□□□ -0.58
RAB3D-201ENST00000222120 CYB5R3P00387 301 aaPredicted RBP11.45□□□□□ -0.58
RAB3D-201ENST00000222120 PGA5P0DJD9 388 aa11.45□□□□□ -0.58
RAB3D-201ENST00000222120 C22orf15Q8WYQ4 148 aa11.45□□□□□ -0.58
RAB3D-201ENST00000222120 IL22RA2Q969J5 263 aa11.45□□□□□ -0.58
RAB3D-201ENST00000222120 CD1BP29016 333 aa11.44□□□□□ -0.58
RAB3D-201ENST00000222120 CDX1P47902 265 aaPredicted RBP11.44□□□□□ -0.58
RAB3D-201ENST00000222120 RPL29P47914 159 aaKnown RBP11.44□□□□□ -0.58
RAB3D-201ENST00000222120 MEF2BQ02080 365 aaPredicted RBP11.44□□□□□ -0.58
RAB3D-201ENST00000222120 ATP6V1FQ16864 119 aa11.44□□□□□ -0.58
RAB3D-201ENST00000222120 CTXND1A0A1B0GTU2 59 aa11.44□□□□□ -0.58
RAB3D-201ENST00000222120 XKRY2A2RUG3 117 aa11.44□□□□□ -0.58
RAB3D-201ENST00000222120 CRYABP02511 175 aaKnown RBP11.44□□□□□ -0.58
RAB3D-201ENST00000222120 ADH4P08319 380 aa11.44□□□□□ -0.58
RAB3D-201ENST00000222120 C21orf62-AS1Q17RA5 79 aa11.44□□□□□ -0.58
RAB3D-201ENST00000222120 ASCL4Q6XD76 172 aa11.44□□□□□ -0.58
RAB3D-201ENST00000222120 ACP7Q6ZNF0 438 aa11.44□□□□□ -0.58
RAB3D-201ENST00000222120 ZCCHC24Q8N2G6 241 aaKnown RBP11.44□□□□□ -0.58
RAB3D-201ENST00000222120 OR4S2Q8NH73 311 aa11.44□□□□□ -0.58
RAB3D-201ENST00000222120 SSC4DQ8WTU2 575 aa11.44□□□□□ -0.58
RAB3D-201ENST00000222120 SLC35D1Q9NTN3 355 aa11.44□□□□□ -0.58
RAB3D-201ENST00000222120 NAT8Q9UHE5 227 aa11.44□□□□□ -0.58
RAB3D-201ENST00000222120 METRNQ9UJH8 293 aa11.44□□□□□ -0.58
RAB3D-201ENST00000222120 CFAP54Q96N23 3096 aa11.44□□□□□ -0.58
RAB3D-201ENST00000222120 ARHGAP21Q5T5U3 1957 aa11.44□□□□□ -0.58
RAB3D-201ENST00000222120 C10orf142B7Z368 130 aa11.44□□□□□ -0.58
RAB3D-201ENST00000222120 FAM27E3Q08E93 113 aa11.44□□□□□ -0.58
RAB3D-201ENST00000222120 PMS2P11Q13670 270 aa11.44□□□□□ -0.58
RAB3D-201ENST00000222120 PRR27Q6MZM9 219 aa11.44□□□□□ -0.58
RAB3D-201ENST00000222120 C5orf52A6NGY3 159 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 LYL1P12980 280 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 GAMTQ14353 236 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 NMSQ5H8A3 153 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 MIC13Q5XKP0 118 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 ACSM6Q6P461 480 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 ZBTB34Q8NCN2 500 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 OR4P4Q8NGL7 312 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 LSM10Q969L4 123 aaKnown RBP11.43□□□□□ -0.58
RAB3D-201ENST00000222120 SLC35E1Q96K37 410 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 QTRT1Q9BXR0 403 aaKnown RBP11.43□□□□□ -0.58
RAB3D-201ENST00000222120 WDR61Q9GZS3 305 aaKnown RBP11.43□□□□□ -0.58
RAB3D-201ENST00000222120 RNF7Q9UBF6 113 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 SSUH2Q9Y2M2 353 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 MGST3O14880 152 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 HRASP01112 189 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 IGHV3-48P01763 117 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 FAM3BP58499 235 aaPredicted RBP11.43□□□□□ -0.58
RAB3D-201ENST00000222120 PKIAP61925 76 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 TFF3Q07654 80 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 TMEM108Q6UXF1 575 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 COLCA1Q6ZS62 124 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 C16orf82Q7Z2V1 217 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 LRP11Q86VZ4 500 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 NGBQ9NPG2 151 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 TOX4O94842 621 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 SELLP14151 372 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 PNRC1Q12796 327 aaPredicted RBP11.43□□□□□ -0.58
RAB3D-201ENST00000222120 SPG11Q96JI7 2443 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 VPS13AQ96RL7 3174 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 FOXI3A8MTJ6 420 aaPredicted RBP11.43□□□□□ -0.58
RAB3D-201ENST00000222120 TGOLN2O43493 480 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 NDUFB4O95168 129 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 TNFRSF1AP19438 455 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 DDTP30046 118 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 P2RY6Q15077 328 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 ZNF497Q6ZNH5 498 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 ZNF525Q8N782 197 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 ZDHHC8Q9ULC8 765 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 MUC6Q6W4X9 2439 aa11.43□□□□□ -0.58
RAB3D-201ENST00000222120 ZNF729A6NN14 1252 aaPredicted RBP11.42□□□□□ -0.58
RAB3D-201ENST00000222120 IGKV1-5P01602 117 aa11.42□□□□□ -0.58
RAB3D-201ENST00000222120 ERVFC1-1P60608 527 aa11.42□□□□□ -0.58
RAB3D-201ENST00000222120 KCNIP2Q9NS61 270 aa11.42□□□□□ -0.58
RAB3D-201ENST00000222120 FUT9Q9Y231 359 aa11.42□□□□□ -0.58
RAB3D-201ENST00000222120 YLPM1P49750 1951 aaKnown RBP11.42□□□□□ -0.58
RAB3D-201ENST00000222120 MED12LQ86YW9 2145 aa11.42□□□□□ -0.58
RAB3D-201ENST00000222120 AHRRA9YTQ3 701 aa11.42□□□□□ -0.58
RAB3D-201ENST00000222120 UBE2CO00762 179 aa11.42□□□□□ -0.58
RAB3D-201ENST00000222120 ERHP84090 104 aaKnown RBP11.42□□□□□ -0.58
RAB3D-201ENST00000222120 RTP5Q14D33 572 aa11.42□□□□□ -0.58
RAB3D-201ENST00000222120 ZDHHC11Q9H8X9 412 aa11.42□□□□□ -0.58
RAB3D-201ENST00000222120 ELOA3CA0A087WX78 387 aaPredicted RBP11.42□□□□□ -0.58
RAB3D-201ENST00000222120 IGHV2OR16-5A0A0B4J2B6 119 aa11.42□□□□□ -0.58
RAB3D-201ENST00000222120 NPY1RP25929 384 aa11.42□□□□□ -0.58
RAB3D-201ENST00000222120 RPL30P62888 115 aaKnown RBP11.42□□□□□ -0.58
RAB3D-201ENST00000222120 RBPJQ06330 500 aa11.42□□□□□ -0.58
RAB3D-201ENST00000222120 IL15RAQ13261 267 aa11.42□□□□□ -0.58
RAB3D-201ENST00000222120 HES1Q14469 280 aa11.42□□□□□ -0.58
RAB3D-201ENST00000222120 ICAM4Q14773 271 aa11.42□□□□□ -0.58
RAB3D-201ENST00000222120 OR10A7Q8NGE5 316 aa11.41□□□□□ -0.58
RAB3D-201ENST00000222120 OR2T10Q8NGZ9 312 aa11.41□□□□□ -0.58
RAB3D-201ENST00000222120 FGF23Q9GZV9 251 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms