RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 BTBD17A6NE02 478 aa13.13□□□□□ -0.31
LIM2-201ENST00000221973 FAM90A9PA6NNJ1 464 aa13.13□□□□□ -0.31
LIM2-201ENST00000221973 CLDN34H7C241 214 aa13.13□□□□□ -0.31
LIM2-201ENST00000221973 FCGR3BO75015 233 aa13.13□□□□□ -0.31
LIM2-201ENST00000221973 RNASE1P07998 156 aaKnown RBP13.13□□□□□ -0.31
LIM2-201ENST00000221973 FAM106CPP0CH98 169 aa13.13□□□□□ -0.31
LIM2-201ENST00000221973 SLC6A1P30531 599 aa13.13□□□□□ -0.31
LIM2-201ENST00000221973 MC5RP33032 325 aa13.13□□□□□ -0.31
LIM2-201ENST00000221973 CATR1Q13166 79 aa13.13□□□□□ -0.31
LIM2-201ENST00000221973 DCTN2Q13561 401 aaKnown RBP13.13□□□□□ -0.31
LIM2-201ENST00000221973 SLC9A3R2Q15599 337 aa13.13□□□□□ -0.31
LIM2-201ENST00000221973 TMED4Q7Z7H5 227 aa13.13□□□□□ -0.31
LIM2-201ENST00000221973 CCDC71LQ8N9Z2 235 aa13.13□□□□□ -0.31
LIM2-201ENST00000221973 ADAD2Q8NCV1 583 aaKnown RBP13.13□□□□□ -0.31
LIM2-201ENST00000221973 DDB2Q92466 427 aa13.13□□□□□ -0.31
LIM2-201ENST00000221973 PALMDQ9NP74 551 aa13.13□□□□□ -0.31
LIM2-201ENST00000221973 PRELID3BQ9Y3B1 194 aa13.13□□□□□ -0.31
LIM2-201ENST00000221973 WASHC3Q9Y3C0 194 aa13.13□□□□□ -0.31
LIM2-201ENST00000221973 MPPED1O15442 326 aa13.12□□□□□ -0.31
LIM2-201ENST00000221973 RND3P61587 244 aa13.12□□□□□ -0.31
LIM2-201ENST00000221973 RTL8BQ17RB0 113 aa13.12□□□□□ -0.31
LIM2-201ENST00000221973 SHISA2Q6UWI4 295 aa13.12□□□□□ -0.31
LIM2-201ENST00000221973 THNSL2Q86YJ6 484 aa13.12□□□□□ -0.31
LIM2-201ENST00000221973 OR5R1Q8NH85 324 aa13.12□□□□□ -0.31
LIM2-201ENST00000221973 ENKURQ8TC29 256 aa13.12□□□□□ -0.31
LIM2-201ENST00000221973 FLVCR2Q9UPI3 526 aa13.12□□□□□ -0.31
LIM2-201ENST00000221973 TCF19Q9Y242 345 aa13.12□□□□□ -0.31
LIM2-201ENST00000221973 A6NDX4 124 aa13.11□□□□□ -0.31
LIM2-201ENST00000221973 ARPC1BO15143 372 aaKnown RBP13.11□□□□□ -0.31
LIM2-201ENST00000221973 MOSP00540 346 aa13.11□□□□□ -0.31
LIM2-201ENST00000221973 IGKV1-16P04430 117 aa13.11□□□□□ -0.31
LIM2-201ENST00000221973 TCRBP04435 133 aa13.11□□□□□ -0.31
LIM2-201ENST00000221973 TMEM11P17152 192 aa13.11□□□□□ -0.31
LIM2-201ENST00000221973 AKR1C4P17516 323 aa13.11□□□□□ -0.31
LIM2-201ENST00000221973 TAGLNQ01995 201 aaKnown RBP13.11□□□□□ -0.31
LIM2-201ENST00000221973 CCBE1Q6UXH8 406 aaPredicted RBP13.11□□□□□ -0.31
LIM2-201ENST00000221973 NRARPQ7Z6K4 114 aa13.11□□□□□ -0.31
LIM2-201ENST00000221973 TMEM219Q86XT9 240 aa13.11□□□□□ -0.31
LIM2-201ENST00000221973 PDPNQ86YL7 162 aa13.11□□□□□ -0.31
LIM2-201ENST00000221973 SPAG16Q8N0X2 631 aa13.11□□□□□ -0.31
LIM2-201ENST00000221973 OR2T10Q8NGZ9 312 aa13.11□□□□□ -0.31
LIM2-201ENST00000221973 EAF1Q96JC9 268 aaPredicted RBP13.11□□□□□ -0.31
LIM2-201ENST00000221973 RITA1Q96K30 269 aa13.11□□□□□ -0.31
LIM2-201ENST00000221973 C20orf85Q9H1P6 137 aa13.11□□□□□ -0.31
LIM2-201ENST00000221973 POMT1Q9Y6A1 747 aa13.11□□□□□ -0.31
LIM2-201ENST00000221973 VWFP04275 2813 aa13.11□□□□□ -0.31
LIM2-201ENST00000221973 TRAV6A0A075B6T7 132 aa13.1□□□□□ -0.31
LIM2-201ENST00000221973 TEX13DA0A0J9YY54 714 aaPredicted RBP13.1□□□□□ -0.31
LIM2-201ENST00000221973 PEX14O75381 377 aa13.1□□□□□ -0.31
LIM2-201ENST00000221973 CRYZL1O95825 349 aa13.1□□□□□ -0.31
LIM2-201ENST00000221973 RRASP10301 218 aa13.1□□□□□ -0.31
LIM2-201ENST00000221973 F2RP25116 425 aa13.1□□□□□ -0.31
LIM2-201ENST00000221973 KIR2DS2P43631 304 aa13.1□□□□□ -0.31
LIM2-201ENST00000221973 BRWD1-AS2P59051 145 aa13.1□□□□□ -0.31
LIM2-201ENST00000221973 CBX3Q13185 183 aa13.1□□□□□ -0.31
LIM2-201ENST00000221973 EBI3Q14213 229 aa13.1□□□□□ -0.31
LIM2-201ENST00000221973 CENPSQ8N2Z9 138 aa13.1□□□□□ -0.31
LIM2-201ENST00000221973 TMEM86BQ8N661 226 aa13.1□□□□□ -0.31
LIM2-201ENST00000221973 TMEM230Q96A57 120 aa13.1□□□□□ -0.31
LIM2-201ENST00000221973 FLYWCH2Q96CP2 140 aaKnown RBP13.1□□□□□ -0.31
LIM2-201ENST00000221973 CHIAQ9BZP6 476 aa13.1□□□□□ -0.31
LIM2-201ENST00000221973 LIN7CQ9NUP9 197 aaKnown RBP13.1□□□□□ -0.31
LIM2-201ENST00000221973 PITPNC1Q9UKF7 332 aa13.1□□□□□ -0.31
LIM2-201ENST00000221973 VPREB3Q9UKI3 123 aa13.1□□□□□ -0.31
LIM2-201ENST00000221973 C3orf85A0A1B0GTC6 90 aa13.09□□□□□ -0.31
LIM2-201ENST00000221973 CRYM-AS1A6NIL9 109 aa13.09□□□□□ -0.31
LIM2-201ENST00000221973 RAMP3O60896 148 aa13.09□□□□□ -0.31
LIM2-201ENST00000221973 ANXA7P20073 488 aaKnown RBP13.09□□□□□ -0.31
LIM2-201ENST00000221973 RPS16P62249 146 aaKnown RBP13.09□□□□□ -0.31
LIM2-201ENST00000221973 SP6Q3SY56 376 aa13.09□□□□□ -0.31
LIM2-201ENST00000221973 OR4S2Q8NH73 311 aa13.09□□□□□ -0.31
LIM2-201ENST00000221973 TP53RKQ96S44 253 aa13.09□□□□□ -0.31
LIM2-201ENST00000221973 NAA60Q9H7X0 242 aa13.09□□□□□ -0.31
LIM2-201ENST00000221973 BEX1Q9HBH7 125 aa13.09□□□□□ -0.31
LIM2-201ENST00000221973 NUDT15Q9NV35 164 aa13.09□□□□□ -0.31
LIM2-201ENST00000221973 TGP01266 2768 aa13.08□□□□□ -0.32
LIM2-201ENST00000221973 SHOXO15266 292 aa13.08□□□□□ -0.32
LIM2-201ENST00000221973 CNTFRP26992 372 aa13.08□□□□□ -0.32
LIM2-201ENST00000221973 DHRS7BQ6IAN0 325 aaPredicted RBP13.08□□□□□ -0.32
LIM2-201ENST00000221973 SGPP2Q8IWX5 399 aa13.08□□□□□ -0.32
LIM2-201ENST00000221973 Q8N6K4 173 aa13.08□□□□□ -0.32
LIM2-201ENST00000221973 DUSP18Q8NEJ0 188 aa13.08□□□□□ -0.32
LIM2-201ENST00000221973 OR4C13Q8NGP0 309 aa13.08□□□□□ -0.32
LIM2-201ENST00000221973 CD300LFQ8TDQ1 290 aa13.08□□□□□ -0.32
LIM2-201ENST00000221973 HARBI1Q96MB7 349 aa13.08□□□□□ -0.32
LIM2-201ENST00000221973 RBM14Q96PK6 669 aaKnown RBP13.08□□□□□ -0.32
LIM2-201ENST00000221973 SLC25A33Q9BSK2 321 aa13.08□□□□□ -0.32
LIM2-201ENST00000221973 NUBP2Q9Y5Y2 271 aa13.08□□□□□ -0.32
LIM2-201ENST00000221973 NCBP2LA6PVI3 153 aaKnown RBP13.07□□□□□ -0.32
LIM2-201ENST00000221973 H0Y980 276 aa13.07□□□□□ -0.32
LIM2-201ENST00000221973 CHST1O43916 411 aa13.07□□□□□ -0.32
LIM2-201ENST00000221973 GPR137BO60478 399 aa13.07□□□□□ -0.32
LIM2-201ENST00000221973 OR2F2O95006 317 aa13.07□□□□□ -0.32
LIM2-201ENST00000221973 H2AFB2P0C5Z0 115 aa13.07□□□□□ -0.32
LIM2-201ENST00000221973 OR5AC1P0C628 307 aa13.07□□□□□ -0.32
LIM2-201ENST00000221973 SPNP16150 400 aa13.07□□□□□ -0.32
LIM2-201ENST00000221973 MDKP21741 143 aaPredicted RBP13.07□□□□□ -0.32
LIM2-201ENST00000221973 LPAR6P43657 344 aa13.07□□□□□ -0.32
LIM2-201ENST00000221973 F2RL1P55085 397 aa13.07□□□□□ -0.32
LIM2-201ENST00000221973 RAB25P57735 213 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms