RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 OBP2BQ9NPH6 170 aa12.84□□□□□ -0.35
TGFB1-201ENST00000221930 MBNL3Q9NUK0 354 aaKnown RBP12.84□□□□□ -0.35
TGFB1-201ENST00000221930 RPH3ALQ9UNE2 315 aa12.84□□□□□ -0.35
TGFB1-201ENST00000221930 UBE2L5PA0A1B0GUS4 154 aa12.83□□□□□ -0.36
TGFB1-201ENST00000221930 CD55P08174 381 aa12.83□□□□□ -0.36
TGFB1-201ENST00000221930 CEACAM8P31997 349 aaPredicted RBP12.83□□□□□ -0.36
TGFB1-201ENST00000221930 KLF3P57682 345 aaPredicted RBP12.83□□□□□ -0.36
TGFB1-201ENST00000221930 RPS16P62249 146 aaKnown RBP12.83□□□□□ -0.36
TGFB1-201ENST00000221930 AESQ08117 197 aa12.83□□□□□ -0.36
TGFB1-201ENST00000221930 ZNF816Q0VGE8 651 aaPredicted RBP12.83□□□□□ -0.36
TGFB1-201ENST00000221930 MRPL49Q13405 166 aaKnown RBP12.83□□□□□ -0.36
TGFB1-201ENST00000221930 OR5I1Q13606 314 aa12.83□□□□□ -0.36
TGFB1-201ENST00000221930 DPPA3Q6W0C5 159 aa12.83□□□□□ -0.36
TGFB1-201ENST00000221930 OR2D2Q9H210 308 aa12.83□□□□□ -0.36
TGFB1-201ENST00000221930 FZR1Q9UM11 496 aa12.83□□□□□ -0.36
TGFB1-201ENST00000221930 CEP250Q9BV73 2442 aa12.83□□□□□ -0.36
TGFB1-201ENST00000221930 HMGB3O15347 200 aaKnown RBP12.83□□□□□ -0.36
TGFB1-201ENST00000221930 AGFG2O95081 481 aa12.83□□□□□ -0.36
TGFB1-201ENST00000221930 CLDN1O95832 211 aa12.83□□□□□ -0.36
TGFB1-201ENST00000221930 HAND1O96004 215 aa12.83□□□□□ -0.36
TGFB1-201ENST00000221930 G6PCP35575 357 aa12.83□□□□□ -0.36
TGFB1-201ENST00000221930 LINC00205P59089 165 aa12.83□□□□□ -0.36
TGFB1-201ENST00000221930 HBG1P69891 147 aa12.83□□□□□ -0.36
TGFB1-201ENST00000221930 HBG2P69892 147 aa12.83□□□□□ -0.36
TGFB1-201ENST00000221930 TPRX1Q8N7U7 411 aa12.83□□□□□ -0.36
TGFB1-201ENST00000221930 OR52L2PQ8NGH6 319 aa12.83□□□□□ -0.36
TGFB1-201ENST00000221930 RPL30P62888 115 aaKnown RBP12.82□□□□□ -0.36
TGFB1-201ENST00000221930 IQCJQ1A5X6 159 aa12.82□□□□□ -0.36
TGFB1-201ENST00000221930 FAM90A2PQ658T7 463 aa12.82□□□□□ -0.36
TGFB1-201ENST00000221930 TEX38Q6PEX7 206 aa12.82□□□□□ -0.36
TGFB1-201ENST00000221930 MSL2Q9HCI7 577 aa12.82□□□□□ -0.36
TGFB1-201ENST00000221930 TRAV1-1A0A0B4J248 108 aa12.82□□□□□ -0.36
TGFB1-201ENST00000221930 C12orf77C9JDV5 145 aa12.82□□□□□ -0.36
TGFB1-201ENST00000221930 CYB5BO43169 146 aa12.82□□□□□ -0.36
TGFB1-201ENST00000221930 BCL2P10415 239 aa12.82□□□□□ -0.36
TGFB1-201ENST00000221930 LRRC75BQ2VPJ9 315 aa12.82□□□□□ -0.36
TGFB1-201ENST00000221930 BTNL3Q6UXE8 466 aa12.82□□□□□ -0.36
TGFB1-201ENST00000221930 CNEP1R1Q8N9A8 125 aa12.82□□□□□ -0.36
TGFB1-201ENST00000221930 KLF14Q8TD94 323 aaPredicted RBP12.82□□□□□ -0.36
TGFB1-201ENST00000221930 C5orf30Q96GV9 206 aa12.82□□□□□ -0.36
TGFB1-201ENST00000221930 HIPK2Q9H2X6 1198 aa12.82□□□□□ -0.36
TGFB1-201ENST00000221930 WIPI2Q9Y4P8 454 aa12.82□□□□□ -0.36
TGFB1-201ENST00000221930 C20orf202A1L168 122 aa12.81□□□□□ -0.36
TGFB1-201ENST00000221930 RPL29P47914 159 aaKnown RBP12.81□□□□□ -0.36
TGFB1-201ENST00000221930 TGFBR3Q03167 851 aa12.81□□□□□ -0.36
TGFB1-201ENST00000221930 Q6ZR03 302 aa12.81□□□□□ -0.36
TGFB1-201ENST00000221930 SLC35E3Q7Z769 313 aa12.81□□□□□ -0.36
TGFB1-201ENST00000221930 WDR61Q9GZS3 305 aaKnown RBP12.81□□□□□ -0.36
TGFB1-201ENST00000221930 DMXL2Q8TDJ6 3036 aa12.81□□□□□ -0.36
TGFB1-201ENST00000221930 PIGBOS1A0A0B4J2F0 54 aa12.81□□□□□ -0.36
TGFB1-201ENST00000221930 MLNRO43193 412 aa12.81□□□□□ -0.36
TGFB1-201ENST00000221930 WNT2P09544 360 aa12.81□□□□□ -0.36
TGFB1-201ENST00000221930 GLIPR1P48060 266 aa12.81□□□□□ -0.36
TGFB1-201ENST00000221930 GALMQ96C23 342 aa12.81□□□□□ -0.36
TGFB1-201ENST00000221930 GMPPAQ96IJ6 420 aaPredicted RBP12.81□□□□□ -0.36
TGFB1-201ENST00000221930 RBKSQ9H477 322 aa12.81□□□□□ -0.36
TGFB1-201ENST00000221930 CLN8Q9UBY8 286 aa12.81□□□□□ -0.36
TGFB1-201ENST00000221930 YLPM1P49750 1951 aaKnown RBP12.81□□□□□ -0.36
TGFB1-201ENST00000221930 CEBPZOSA8MTT3 80 aa12.81□□□□□ -0.36
TGFB1-201ENST00000221930 OR4A8P0C604 315 aa12.81□□□□□ -0.36
TGFB1-201ENST00000221930 SLC38A11Q08AI6 406 aa12.81□□□□□ -0.36
TGFB1-201ENST00000221930 C1orf185Q5T7R7 199 aa12.81□□□□□ -0.36
TGFB1-201ENST00000221930 TRIB1Q96RU8 372 aa12.81□□□□□ -0.36
TGFB1-201ENST00000221930 ZDHHC11Q9H8X9 412 aa12.81□□□□□ -0.36
TGFB1-201ENST00000221930 KCNIP1Q9NZI2 227 aa12.81□□□□□ -0.36
TGFB1-201ENST00000221930 IGKV1D-33P01593 117 aa12.8□□□□□ -0.36
TGFB1-201ENST00000221930 IGKV1-33P01594 117 aa12.8□□□□□ -0.36
TGFB1-201ENST00000221930 GABRA2P47869 451 aa12.8□□□□□ -0.36
TGFB1-201ENST00000221930 SPINK9Q5DT21 86 aa12.8□□□□□ -0.36
TGFB1-201ENST00000221930 PRAMEF6Q5VXH4 476 aa12.8□□□□□ -0.36
TGFB1-201ENST00000221930 TMEM178AQ8NBL3 297 aa12.8□□□□□ -0.36
TGFB1-201ENST00000221930 TAF15Q92804 592 aaKnown RBP eCLIP12.8□□□□□ -0.36
TGFB1-201ENST00000221930 CORO2AQ92828 525 aa12.8□□□□□ -0.36
TGFB1-201ENST00000221930 CISD1Q9NZ45 108 aaKnown RBP12.8□□□□□ -0.36
TGFB1-201ENST00000221930 IGHV3-43A0A0B4J1X8 118 aa12.8□□□□□ -0.36
TGFB1-201ENST00000221930 MAP1LC3B2A6NCE7 125 aa12.8□□□□□ -0.36
TGFB1-201ENST00000221930 PRR33A8MZF0 331 aa12.8□□□□□ -0.36
TGFB1-201ENST00000221930 HBZP02008 142 aa12.8□□□□□ -0.36
TGFB1-201ENST00000221930 IGHV3-43DP0DP04 118 aa12.8□□□□□ -0.36
TGFB1-201ENST00000221930 SRSF6Q13247 344 aaKnown RBP12.8□□□□□ -0.36
TGFB1-201ENST00000221930 VHLLQ6RSH7 139 aa12.8□□□□□ -0.36
TGFB1-201ENST00000221930 RPP25LQ8N5L8 163 aaKnown RBP12.8□□□□□ -0.36
TGFB1-201ENST00000221930 ZNF645Q8N7E2 425 aa12.8□□□□□ -0.36
TGFB1-201ENST00000221930 RFESDQ8TAC1 157 aa12.8□□□□□ -0.36
TGFB1-201ENST00000221930 TNFRSF14Q92956 283 aa12.8□□□□□ -0.36
TGFB1-201ENST00000221930 PSMG3Q9BT73 122 aaPredicted RBP12.8□□□□□ -0.36
TGFB1-201ENST00000221930 MAP1LC3BQ9GZQ8 125 aa12.8□□□□□ -0.36
TGFB1-201ENST00000221930 DEFB108AA8MXU0 73 aa12.79□□□□□ -0.36
TGFB1-201ENST00000221930 IQCF6A8MYZ5 107 aa12.79□□□□□ -0.36
TGFB1-201ENST00000221930 S1PR2O95136 353 aa12.79□□□□□ -0.36
TGFB1-201ENST00000221930 BRWD1-AS2P59051 145 aa12.79□□□□□ -0.36
TGFB1-201ENST00000221930 GABRA6Q16445 453 aa12.79□□□□□ -0.36
TGFB1-201ENST00000221930 ATP6V1FQ16864 119 aa12.79□□□□□ -0.36
TGFB1-201ENST00000221930 COA6Q5JTJ3 125 aaKnown RBP12.79□□□□□ -0.36
TGFB1-201ENST00000221930 C11orf42Q8N5U0 333 aa12.79□□□□□ -0.36
TGFB1-201ENST00000221930 MBD3L1Q8WWY6 194 aa12.79□□□□□ -0.36
TGFB1-201ENST00000221930 ZDHHC16Q969W1 377 aa12.79□□□□□ -0.36
TGFB1-201ENST00000221930 VAX2Q9UIW0 290 aa12.79□□□□□ -0.36
TGFB1-201ENST00000221930 METRNQ9UJH8 293 aa12.79□□□□□ -0.36
TGFB1-201ENST00000221930 TMEM30CPA0ZSE6 113 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms