RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 TP53RKQ96S44 253 aa16.07■□□□□ 0.16
MBD3-201ENST00000156825 IGHV1-69-2A0A0G2JMI3 117 aa16.07■□□□□ 0.16
MBD3-201ENST00000156825 PGPA6NDG6 321 aa16.07■□□□□ 0.16
MBD3-201ENST00000156825 PTBP3O95758 552 aaKnown RBP16.07■□□□□ 0.16
MBD3-201ENST00000156825 MRPL37Q9BZE1 423 aaKnown RBP16.07■□□□□ 0.16
MBD3-201ENST00000156825 MFSD2BA6NFX1 497 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 CBY3A6NI87 242 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 PROB1E7EW31 1015 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 HAX1O00165 279 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 CELA3BP08861 270 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 FCGR2BP31994 310 aaPredicted RBP16.06■□□□□ 0.16
MBD3-201ENST00000156825 MEOX2P50222 304 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 LRRC75BQ2VPJ9 315 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 Q6ZN92 141 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 H0YL77 283 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 HIST1H1EP10412 219 aaKnown RBP16.06■□□□□ 0.16
MBD3-201ENST00000156825 MMD2Q8IY49 270 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 GBGT1Q8N5D6 347 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 OR5P3Q8WZ94 311 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 IMMP1LQ96LU5 166 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 SFXN3Q9BWM7 321 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 IGHMP01871 453 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 ZNF735P0CB33 412 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 HOXA6P31267 233 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 ELOBQ15370 118 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 RARRES2Q99969 163 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 FAM90A10PA6NDY2 464 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 FAM90A18PA6NE21 464 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 FAM90A16PA6NEW6 464 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 FAM90A20PA6NIJ5 464 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 FAM90A8PA6NJQ4 464 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 FAM90A7PA6NKC0 464 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 FAM90A22PA8MWA6 464 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 FAM90A12PA8MX19 464 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 FAM90A5PA8MXJ8 464 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 FAM90A23PA8MXZ1 464 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 FAM90A15PP0C7V4 464 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 FAM90A13PP0C7W8 464 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 FAM90A14PP0C7W9 464 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 FAM90A24PP0C7X0 464 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 HOXA4Q00056 320 aaPredicted RBP16.06■□□□□ 0.16
MBD3-201ENST00000156825 TNFRSF9Q07011 255 aa16.06■□□□□ 0.16
MBD3-201ENST00000156825 B4DEV8 164 aa16.05■□□□□ 0.16
MBD3-201ENST00000156825 S4R3C0 116 aa16.05■□□□□ 0.16
MBD3-201ENST00000156825 NUBP1P53384 320 aa16.05■□□□□ 0.16
MBD3-201ENST00000156825 GFRA1P56159 465 aa16.05■□□□□ 0.16
MBD3-201ENST00000156825 PAFAH1B2P68402 229 aa16.05■□□□□ 0.16
MBD3-201ENST00000156825 DCAF16Q9NXF7 216 aa16.05■□□□□ 0.16
MBD3-201ENST00000156825 IGHV3OR16-12A0A075B7B8 117 aa16.05■□□□□ 0.16
MBD3-201ENST00000156825 COX5BP10606 129 aa16.05■□□□□ 0.16
MBD3-201ENST00000156825 HOXB1P14653 301 aaPredicted RBP16.05■□□□□ 0.16
MBD3-201ENST00000156825 RAB24Q969Q5 203 aa16.05■□□□□ 0.16
MBD3-201ENST00000156825 CHRNA10Q9GZZ6 450 aa16.05■□□□□ 0.16
MBD3-201ENST00000156825 IGLV3-19P01714 112 aa16.05■□□□□ 0.16
MBD3-201ENST00000156825 HSPE1P61604 102 aaKnown RBP16.05■□□□□ 0.16
MBD3-201ENST00000156825 WDR25Q64LD2 544 aaPredicted RBP16.05■□□□□ 0.16
MBD3-201ENST00000156825 PUSL1Q8N0Z8 303 aaKnown RBP16.05■□□□□ 0.16
MBD3-201ENST00000156825 TCF19Q9Y242 345 aa16.05■□□□□ 0.16
MBD3-201ENST00000156825 GREB1LQ9C091 1923 aaPredicted RBP16.04■□□□□ 0.16
MBD3-201ENST00000156825 MTCL1Q9Y4B5 1905 aaKnown RBP16.04■□□□□ 0.16
MBD3-201ENST00000156825 C9orf172C9J069 976 aa16.04■□□□□ 0.16
MBD3-201ENST00000156825 APCSP02743 223 aa16.04■□□□□ 0.16
MBD3-201ENST00000156825 EGR1P18146 543 aa16.04■□□□□ 0.16
MBD3-201ENST00000156825 MEF2BQ02080 365 aaPredicted RBP16.04■□□□□ 0.16
MBD3-201ENST00000156825 ZNF841Q6ZN19 808 aa16.04■□□□□ 0.16
MBD3-201ENST00000156825 GTF2H5Q6ZYL4 71 aa16.04■□□□□ 0.16
MBD3-201ENST00000156825 OR4C5Q8NGB2 326 aa16.04■□□□□ 0.16
MBD3-201ENST00000156825 IFT22Q9H7X7 185 aa16.04■□□□□ 0.16
MBD3-201ENST00000156825 PAM16Q9Y3D7 125 aa16.04■□□□□ 0.16
MBD3-201ENST00000156825 ERVH48-1M5A8F1 160 aa16.04■□□□□ 0.16
MBD3-201ENST00000156825 TNFSF10P50591 281 aa16.04■□□□□ 0.16
MBD3-201ENST00000156825 MRPL14Q6P1L8 145 aaKnown RBP16.04■□□□□ 0.16
MBD3-201ENST00000156825 FAM216BQ8N7L0 139 aa16.04■□□□□ 0.16
MBD3-201ENST00000156825 ARID2Q68CP9 1835 aa16.04■□□□□ 0.16
MBD3-201ENST00000156825 PTGDSP41222 190 aa16.04■□□□□ 0.16
MBD3-201ENST00000156825 SSX8Q7RTT4 187 aa16.04■□□□□ 0.16
MBD3-201ENST00000156825 GREB1Q4ZG55 1949 aa16.04■□□□□ 0.16
MBD3-201ENST00000156825 FER1L5A0AVI2 2057 aa16.04■□□□□ 0.16
MBD3-201ENST00000156825 SCGB1D4Q6XE38 83 aa16.04■□□□□ 0.16
MBD3-201ENST00000156825 C16orf92Q96LL3 132 aa16.04■□□□□ 0.16
MBD3-201ENST00000156825 SDHCQ99643 169 aaPredicted RBP16.04■□□□□ 0.16
MBD3-201ENST00000156825 GSX1Q9H4S2 264 aaPredicted RBP16.04■□□□□ 0.16
MBD3-201ENST00000156825 LYRM2Q9NU23 88 aaPredicted RBP16.04■□□□□ 0.16
MBD3-201ENST00000156825 CHD5Q8TDI0 1954 aa16.04■□□□□ 0.16
MBD3-201ENST00000156825 VN1R17PQ8TDU5 208 aa16.03■□□□□ 0.16
MBD3-201ENST00000156825 FXYD3Q14802 87 aa16.03■□□□□ 0.16
MBD3-201ENST00000156825 ZCCHC24Q8N2G6 241 aaKnown RBP16.03■□□□□ 0.16
MBD3-201ENST00000156825 SCNM1Q9BWG6 230 aa16.03■□□□□ 0.16
MBD3-201ENST00000156825 hCG_38984A0A1B0GV85 526 aa16.03■□□□□ 0.16
MBD3-201ENST00000156825 FAM74A3Q4VXF1 159 aa16.03■□□□□ 0.16
MBD3-201ENST00000156825 MED13LQ71F56 2210 aa16.03■□□□□ 0.16
MBD3-201ENST00000156825 TMEM97Q5BJF2 176 aa16.03■□□□□ 0.16
MBD3-201ENST00000156825 LOC105371242A0A075B767 164 aa16.02■□□□□ 0.16
MBD3-201ENST00000156825 ZCCHC14Q8WYQ9 949 aaKnown RBP16.02■□□□□ 0.16
MBD3-201ENST00000156825 DOCK7Q96N67 2140 aa16.02■□□□□ 0.16
MBD3-201ENST00000156825 FAM74A7A6NL05 159 aa16.02■□□□□ 0.16
MBD3-201ENST00000156825 ZNF343Q6P1L6 599 aa16.02■□□□□ 0.16
MBD3-201ENST00000156825 RPL13AP40429 203 aaKnown RBP16.02■□□□□ 0.16
MBD3-201ENST00000156825 TMEM187Q14656 261 aa16.02■□□□□ 0.16
MBD3-201ENST00000156825 TMEM191AQ9H0A3 160 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms