RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Ascl1Q02067 231 aa11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Plppr5Q8BJ52 321 aa11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Cldn15Q9Z0S5 227 aa11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Gm3839S4R1W1 333 aa11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Lrp5Q91VN0 1614 aa11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Sult2a2P50236 285 aa11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Crybb2P62696 205 aa11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Rtp3Q5QGU6 474 aa11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Gpr135Q7TQP2 457 aa11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Fam234aQ8C0Z1 555 aa11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Olfr1044Q8VGR9 314 aa11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Sf3b5Q923D4 86 aaKnown RBP11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Tmem9bQ9JJR8 199 aa11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Olfr102B2RT33 308 aa11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Vmn1r127K7N6J5 305 aa11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Vmn1r115K7N6Y3 295 aa11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Fabp9O08716 132 aa11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Meox1P32442 253 aa11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Vmn1r236Q05A06 334 aa11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 TctaQ8VEA7 122 aa11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Sval2Q99N75 144 aa11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Tmem107Q9CPV0 140 aa11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Otud1Q9CUB6 454 aa11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Irak1bp1Q9ESJ7 259 aa11.03□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Olfr1179A2AUS6 307 aa11.02□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Syngr2O55101 224 aa11.02□□□□□ -0.64
Ssh1-202ENSMUST00000112298 H2-LP01897 362 aa11.02□□□□□ -0.64
Ssh1-202ENSMUST00000112298 MgpP19788 104 aa11.02□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Bglap3P54615 95 aa11.02□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Sap30lQ5SQF8 182 aa11.02□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Vmn1r50Q9EP51 310 aa11.02□□□□□ -0.64
Ssh1-202ENSMUST00000112298 Gm29049A0A087WSM5 227 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Olfr1293-psA0A1L1SVB5 326 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Gm21118J3QPK8 227 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Gabra1P62812 455 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Gm20909Q5FWB5 227 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Gm20852Q5M8R5 227 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Gm20917Q62457 227 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Gm20809Q62458 227 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Gm20865Q62460 227 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Gm20738Q810R8 227 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Zfp747Q8BHM7 422 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Kbtbd11Q8BNW9 633 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Alkbh6Q8K2U2 238 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Olfr992Q8VGC6 309 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Olfr124Q8VGW6 315 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 S1pr5Q91X56 400 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Gm20806Q9D9T3 227 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 IcaQ9DBD0 700 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Fzd5Q9EQD0 585 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Ice1E9Q286 2241 aaKnown RBP11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Gm20422E9PUR3 255 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Timp1P12032 205 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 F2rl1P55086 399 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Gcnt2P97402 401 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 SrstQ06666 185 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 MestQ07646 335 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Cd55bQ61476 407 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 SinhcafQ8C8M1 221 aaKnown RBP11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 MrgprfQ8VCJ6 343 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Bles03Q8VD62 251 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Olfr492Q8VFD1 314 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Lyzl6Q9DA11 148 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Mad2l1bpQ9DCX1 276 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Bcl2l10Q9Z0F3 191 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Zfp931A2AHM2 298 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Ptbp1P17225 527 aaKnown RBP11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Olfr1437Q7TQR7 312 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Vstm2aQ8R0A6 236 aa11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Srsf4Q8VE97 489 aaKnown RBP11.02□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Klf16P58334 251 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Gpank1Q61858 372 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Fbxw26Q8BI58 466 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Cd99l2Q8BIF0 237 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Slc24a5Q8C261 501 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Olfr1324Q8VEU7 332 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Abhd17aQ99JW1 310 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Ankrd10Q99LW0 415 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Rab32Q9CZE3 223 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Il18bpQ9Z0M9 193 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Cldn13Q9Z0S4 211 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Fcn2O70497 314 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Klk1b3P00756 261 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Bmpr1bP36898 502 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Taar3Q5QD16 343 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Hand1Q64279 216 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Vmn1r73Q8R293 303 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Zmat5Q9CQR5 170 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Cml3Q9JIY8 226 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Samt1A2BED8 237 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Gm12887B1AVM1 119 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Vmn1r160E9Q346 307 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Vmn1r123L7N270 307 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Nudt10P0C027 164 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Nudt11P0C028 164 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Cnr1P47746 473 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Pebp1P70296 187 aaKnown RBP11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 MplQ08351 625 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 Fam160a2Q3U2I3 975 aa11.01□□□□□ -0.65
Ssh1-202ENSMUST00000112298 CebpeQ6PZD9 281 aa11.01□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms