RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Olfr688Q6W049 321 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Acsm5Q8BGA8 578 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 TbceQ8CIV8 524 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 SptssaQ8R207 71 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr994Q8VF73 314 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr1257Q8VGP0 309 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Reg4Q9D8G5 157 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Hsd17b11Q9EQ06 298 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Col27a1Q5QNQ9 1845 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Gm20219A0A1B0GRQ3 87 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Vmn1r138D3YTY2 306 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Gm8693E9PW18 306 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr914E9PW59 316 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Ankrd66J3QNN4 192 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Gm4498K9J7G4 306 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Vmn1r118L7N273 306 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Glp1rO35659 463 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 PkibQ04758 92 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Tmprss11fQ8BHM9 439 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Plcxd1Q8CHS4 345 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Sft2d2Q8VD57 159 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Jag2Q9QYE5 1247 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Gm37797A0A1D5RLC8 261 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 Gm13769A2ATW2 309 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 4930435E12RikA6X8Z9 381 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 Rbm24D3Z4I3 236 aaKnown RBP14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr231E9Q0M4 307 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 Gm6526G3X9Q9 198 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 Gm8265K7N6Y8 158 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 Ntsr1O88319 424 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 AregP31955 248 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr1442Q0VEV7 312 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 Rab35Q6PHN9 201 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr890Q7TRD9 314 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 Rps19bp1Q8C6B9 143 aaKnown RBP14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 Cela3bQ9CQ52 269 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 MmachcQ9CZD0 279 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 Lamtor5Q9D1L9 91 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 2410004P03RikA0A087WQY2 205 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 2610044O15Rik8A0A087WRJ1 410 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 HhexP43120 271 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 Rps23P62267 143 aaKnown RBP14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 Cd200r4Q6XJV4 270 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 SowahbQ8BZW2 760 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 Rbmxl1Q91VM5 388 aaKnown RBP14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 Ddah2Q99LD8 285 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 Srp19Q9D7A6 144 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 Prok2Q9QXU7 128 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 Ccpg1osV9GXK1 122 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 Tanc2A2A690 1994 aa14.16□□□□□ -0.14
Shh-201ENSMUST00000002708 Ighv6-4A0A0A6YX19 119 aa14.15□□□□□ -0.14
Shh-201ENSMUST00000002708 Nxpe5E0CX47 564 aa14.15□□□□□ -0.14
Shh-201ENSMUST00000002708 Vmn1r80L7N1Z3 308 aa14.15□□□□□ -0.14
Shh-201ENSMUST00000002708 Cd7P50283 210 aa14.15□□□□□ -0.14
Shh-201ENSMUST00000002708 St6galnac2P70277 373 aa14.15□□□□□ -0.14
Shh-201ENSMUST00000002708 Thbs3Q05895 956 aa14.15□□□□□ -0.14
Shh-201ENSMUST00000002708 Tmprss12Q3V0Q7 336 aa14.15□□□□□ -0.14
Shh-201ENSMUST00000002708 Vmn1r167G3UW71 315 aa14.15□□□□□ -0.14
Shh-201ENSMUST00000002708 GrnP28798 589 aaKnown RBP14.15□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr142Q60881 305 aa14.15□□□□□ -0.14
Shh-201ENSMUST00000002708 Klk1b21Q61759 261 aa14.15□□□□□ -0.14
Shh-201ENSMUST00000002708 Rasl2-9Q61820 216 aa14.15□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr1042Q7TR81 313 aa14.15□□□□□ -0.14
Shh-201ENSMUST00000002708 Cd226Q8K4F0 333 aa14.15□□□□□ -0.14
Shh-201ENSMUST00000002708 Lyrm2Q8R033 88 aa14.15□□□□□ -0.14
Shh-201ENSMUST00000002708 Tspan2Q922J6 221 aa14.15□□□□□ -0.14
Shh-201ENSMUST00000002708 Sf3b5Q923D4 86 aaKnown RBP14.15□□□□□ -0.14
Shh-201ENSMUST00000002708 Tm7sf3Q9CRG1 565 aa14.15□□□□□ -0.14
Shh-201ENSMUST00000002708 Mrps30Q9D0G0 442 aaKnown RBP14.15□□□□□ -0.14
Shh-201ENSMUST00000002708 Mdp1Q9D967 164 aa14.15□□□□□ -0.14
Shh-201ENSMUST00000002708 MvkQ9R008 395 aa14.15□□□□□ -0.14
Shh-201ENSMUST00000002708 Igkv1-135A0A0B4J1H7 120 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Ear14F6YUX7 155 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Rnase2O35291 155 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Cd84Q18PI6 329 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Zfp729aQ4QQP3 973 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 IslrQ6GU68 428 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Slc22a27Q76M72 551 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Mrps26Q80ZS3 200 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Olfr654Q8VF27 341 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 PifoQ9D9W1 207 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Prss21Q9JHJ7 324 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Ube2j1Q9JJZ4 318 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 SpegQ62407 3262 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Gm42543A0A0G2JET4 117 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Adam6aB2RSY5 754 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Gm10037E9PX85 104 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Atf6bO35451 699 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Rps10P63325 165 aaKnown RBP14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Btn1a1Q62556 524 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 St8sia3Q64689 380 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Foxb1Q64732 325 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Dusp23Q6NT99 150 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Olfr804Q7TRH7 314 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Exosc6Q8BTW3 273 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Myct1Q8R411 188 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Thyn1Q91YJ3 226 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Rpp14Q9CQH8 122 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Arxes1C0HK79 180 aa14.14□□□□□ -0.15
Shh-201ENSMUST00000002708 Arxes2C0HK80 180 aa14.14□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms