RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 P0C879 139 aa14.35□□□□□ -0.11
PHGDH-232ENST00000641947 ZFP36P26651 326 aaKnown RBP14.35□□□□□ -0.11
PHGDH-232ENST00000641947 LSM10Q969L4 123 aaKnown RBP14.35□□□□□ -0.11
PHGDH-232ENST00000641947 RCL1Q9Y2P8 373 aaKnown RBP14.35□□□□□ -0.11
PHGDH-232ENST00000641947 SESN1Q9Y6P5 492 aa14.35□□□□□ -0.11
PHGDH-232ENST00000641947 WNK2Q9Y3S1 2297 aa14.35□□□□□ -0.11
PHGDH-232ENST00000641947 J3QR06 171 aa14.34□□□□□ -0.11
PHGDH-232ENST00000641947 FCGR3BO75015 233 aa14.34□□□□□ -0.11
PHGDH-232ENST00000641947 PITX3O75364 302 aa14.34□□□□□ -0.11
PHGDH-232ENST00000641947 NXPH3O95157 252 aa14.34□□□□□ -0.11
PHGDH-232ENST00000641947 G6PCP35575 357 aa14.34□□□□□ -0.11
PHGDH-232ENST00000641947 DIAPH2-AS1Q14236 149 aa14.34□□□□□ -0.11
PHGDH-232ENST00000641947 OPCMLQ14982 345 aa14.34□□□□□ -0.11
PHGDH-232ENST00000641947 CXorf66Q5JRM2 361 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-232ENST00000641947 Q8N7P7 452 aa14.34□□□□□ -0.11
PHGDH-232ENST00000641947 ZNF383Q8NA42 475 aa14.34□□□□□ -0.11
PHGDH-232ENST00000641947 TMEM133Q9H2Q1 129 aa14.34□□□□□ -0.11
PHGDH-232ENST00000641947 FAM212BQ9NTI7 297 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-232ENST00000641947 PTPN13Q12923 2485 aa14.34□□□□□ -0.11
PHGDH-232ENST00000641947 RGS13O14921 159 aa14.34□□□□□ -0.11
PHGDH-232ENST00000641947 S100A11P31949 105 aa14.34□□□□□ -0.11
PHGDH-232ENST00000641947 AKR1C2P52895 323 aa14.34□□□□□ -0.11
PHGDH-232ENST00000641947 ZNF833PQ6ZTB9 187 aa14.34□□□□□ -0.11
PHGDH-232ENST00000641947 LINC00311Q8N616 119 aa14.34□□□□□ -0.11
PHGDH-232ENST00000641947 TCTEX1D1Q8N7M0 179 aa14.34□□□□□ -0.11
PHGDH-232ENST00000641947 C8orf31Q8N9H6 132 aa14.34□□□□□ -0.11
PHGDH-232ENST00000641947 CLDND2Q8NHS1 167 aa14.34□□□□□ -0.11
PHGDH-232ENST00000641947 GON7Q9BXV9 100 aa14.34□□□□□ -0.11
PHGDH-232ENST00000641947 C11orf1Q9H5F2 150 aa14.34□□□□□ -0.11
PHGDH-232ENST00000641947 CACNG5Q9UF02 275 aa14.34□□□□□ -0.11
PHGDH-232ENST00000641947 ABCA12Q86UK0 2595 aa14.33□□□□□ -0.11
PHGDH-232ENST00000641947 KRASP01116 189 aa14.33□□□□□ -0.12
PHGDH-232ENST00000641947 CT45A6P0DMU7 189 aa14.33□□□□□ -0.12
PHGDH-232ENST00000641947 CT45A5P0DMU8 189 aa14.33□□□□□ -0.12
PHGDH-232ENST00000641947 CT45A7P0DMV0 189 aa14.33□□□□□ -0.12
PHGDH-232ENST00000641947 LMO4P61968 165 aa14.33□□□□□ -0.12
PHGDH-232ENST00000641947 ESCO2Q56NI9 601 aa14.33□□□□□ -0.12
PHGDH-232ENST00000641947 ACOT7LQ6ZUV0 252 aa14.33□□□□□ -0.12
PHGDH-232ENST00000641947 ABHD12Q8N2K0 398 aa14.33□□□□□ -0.12
PHGDH-232ENST00000641947 DMBX1Q8NFW5 382 aa14.33□□□□□ -0.12
PHGDH-232ENST00000641947 SPIN2AQ99865 258 aa14.33□□□□□ -0.12
PHGDH-232ENST00000641947 SPIN2BQ9BPZ2 258 aa14.33□□□□□ -0.12
PHGDH-232ENST00000641947 ARL6Q9H0F7 186 aa14.33□□□□□ -0.12
PHGDH-232ENST00000641947 SLA2Q9H6Q3 261 aa14.33□□□□□ -0.12
PHGDH-232ENST00000641947 ONECUT1Q9UBC0 465 aa14.33□□□□□ -0.12
PHGDH-232ENST00000641947 APCP25054 2843 aa14.33□□□□□ -0.12
PHGDH-232ENST00000641947 LOC105371242A0A075B767 164 aa14.32□□□□□ -0.12
PHGDH-232ENST00000641947 LIPFP07098 398 aa14.32□□□□□ -0.12
PHGDH-232ENST00000641947 PDLIM4P50479 330 aa14.32□□□□□ -0.12
PHGDH-232ENST00000641947 KRTAP10-9P60411 292 aa14.32□□□□□ -0.12
PHGDH-232ENST00000641947 ZNF345Q14585 488 aa14.32□□□□□ -0.12
PHGDH-232ENST00000641947 KCNRGQ8N5I3 272 aa14.32□□□□□ -0.12
PHGDH-232ENST00000641947 RNASE11Q8TAA1 199 aaKnown RBP14.32□□□□□ -0.12
PHGDH-232ENST00000641947 ST6GALNAC6Q969X2 333 aa14.32□□□□□ -0.12
PHGDH-232ENST00000641947 MAGT1Q9H0U3 335 aa14.32□□□□□ -0.12
PHGDH-232ENST00000641947 POMT1Q9Y6A1 747 aa14.32□□□□□ -0.12
PHGDH-232ENST00000641947 CELSR1Q9NYQ6 3014 aa14.32□□□□□ -0.12
PHGDH-232ENST00000641947 IGHV2-26A0A0B4J1V2 119 aa14.32□□□□□ -0.12
PHGDH-232ENST00000641947 A0A1B0GU03 582 aa14.32□□□□□ -0.12
PHGDH-232ENST00000641947 J3QKU1 62 aa14.32□□□□□ -0.12
PHGDH-232ENST00000641947 RBP4P02753 201 aa14.32□□□□□ -0.12
PHGDH-232ENST00000641947 PET100P0DJ07 73 aa14.32□□□□□ -0.12
PHGDH-232ENST00000641947 SLC25A6P12236 298 aa14.32□□□□□ -0.12
PHGDH-232ENST00000641947 POLR2GP62487 172 aaKnown RBP eCLIP14.32□□□□□ -0.12
PHGDH-232ENST00000641947 MIDNQ504T8 468 aa14.32□□□□□ -0.12
PHGDH-232ENST00000641947 THOC7Q6I9Y2 204 aaKnown RBP14.32□□□□□ -0.12
PHGDH-232ENST00000641947 OR9G1Q8NH87 305 aa14.32□□□□□ -0.12
PHGDH-232ENST00000641947 RAB39BQ96DA2 213 aa14.32□□□□□ -0.12
PHGDH-232ENST00000641947 MRPL20Q9BYC9 149 aaKnown RBP14.32□□□□□ -0.12
PHGDH-232ENST00000641947 MMP24Q9Y5R2 645 aa14.32□□□□□ -0.12
PHGDH-232ENST00000641947 ST8SIA3O43173 380 aa14.31□□□□□ -0.12
PHGDH-232ENST00000641947 OR2F2O95006 317 aa14.31□□□□□ -0.12
PHGDH-232ENST00000641947 CFDP00746 253 aaPredicted RBP14.31□□□□□ -0.12
PHGDH-232ENST00000641947 NKX2-1P43699 371 aaPredicted RBP14.31□□□□□ -0.12
PHGDH-232ENST00000641947 REG1BP48304 166 aa14.31□□□□□ -0.12
PHGDH-232ENST00000641947 THBS3P49746 956 aa14.31□□□□□ -0.12
PHGDH-232ENST00000641947 ATP5J2P56134 94 aa14.31□□□□□ -0.12
PHGDH-232ENST00000641947 ARF6P62330 175 aa14.31□□□□□ -0.12
PHGDH-232ENST00000641947 ID3Q02535 119 aa14.31□□□□□ -0.12
PHGDH-232ENST00000641947 PAX2Q02962 417 aa14.31□□□□□ -0.12
PHGDH-232ENST00000641947 OR2F1Q13607 317 aa14.31□□□□□ -0.12
PHGDH-232ENST00000641947 SMCO1Q147U7 214 aa14.31□□□□□ -0.12
PHGDH-232ENST00000641947 PERPQ96FX8 193 aa14.31□□□□□ -0.12
PHGDH-232ENST00000641947 S1PR3Q99500 378 aa14.31□□□□□ -0.12
PHGDH-232ENST00000641947 MARCH11A6NNE9 402 aa14.3□□□□□ -0.12
PHGDH-232ENST00000641947 RBFOX2O43251 390 aaKnown RBP eCLIP14.3□□□□□ -0.127e-8■■□□□ 12.4
PHGDH-232ENST00000641947 IGLV1-47P01700 117 aa14.3□□□□□ -0.12
PHGDH-232ENST00000641947 HKR1P10072 659 aa14.3□□□□□ -0.12
PHGDH-232ENST00000641947 VKORC1L1Q8N0U8 176 aa14.3□□□□□ -0.12
PHGDH-232ENST00000641947 OR10X1Q8NGY0 326 aa14.3□□□□□ -0.12
PHGDH-232ENST00000641947 C10orf105Q8TEF2 133 aa14.3□□□□□ -0.12
PHGDH-232ENST00000641947 R3HDM4Q96D70 268 aa14.3□□□□□ -0.12
PHGDH-232ENST00000641947 AQP10Q96PS8 301 aa14.3□□□□□ -0.12
PHGDH-232ENST00000641947 PLEKHA2Q9HB19 425 aa14.3□□□□□ -0.12
PHGDH-232ENST00000641947 SIRT7Q9NRC8 400 aa14.3□□□□□ -0.12
PHGDH-232ENST00000641947 GCN1Q92616 2671 aaKnown RBP14.3□□□□□ -0.12
PHGDH-232ENST00000641947 A0A1W2PPH5 198 aa14.29□□□□□ -0.12
PHGDH-232ENST00000641947 VWC2LB2RUY7 222 aa14.29□□□□□ -0.12
PHGDH-232ENST00000641947 TMEM50AO95807 157 aa14.29□□□□□ -0.12
PHGDH-232ENST00000641947 HPRT1P00492 218 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms