RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 TAF15Q92804 592 aaKnown RBP eCLIP14.98□□□□□ -0.01
SCARB2-223ENST00000640640 CXorf1O96002 111 aa14.98□□□□□ -0.01
SCARB2-223ENST00000640640 CYB5R3P00387 301 aaPredicted RBP14.98□□□□□ -0.01
SCARB2-223ENST00000640640 ZNF880Q6PDB4 577 aa14.98□□□□□ -0.01
SCARB2-223ENST00000640640 LILRB1Q8NHL6 650 aaPredicted RBP14.98□□□□□ -0.01
SCARB2-223ENST00000640640 SIRT7Q9NRC8 400 aa14.98□□□□□ -0.01
SCARB2-223ENST00000640640 SEMA5BQ9P283 1151 aa14.98□□□□□ -0.01
SCARB2-223ENST00000640640 PDE6DO43924 150 aa14.98□□□□□ -0.01
SCARB2-223ENST00000640640 SSTR5P35346 364 aa14.98□□□□□ -0.01
SCARB2-223ENST00000640640 MSGN1A6NI15 193 aa14.97□□□□□ -0.01
SCARB2-223ENST00000640640 CCL1P22362 96 aa14.97□□□□□ -0.01
SCARB2-223ENST00000640640 TNFRSF9Q07011 255 aa14.97□□□□□ -0.01
SCARB2-223ENST00000640640 ANAPC16Q96DE5 110 aa14.97□□□□□ -0.01
SCARB2-223ENST00000640640 JPT1Q9UK76 154 aa14.97□□□□□ -0.01
SCARB2-223ENST00000640640 PSG7Q13046 419 aa14.97□□□□□ -0.01
SCARB2-223ENST00000640640 PAQR4Q8N4S7 273 aaPredicted RBP14.97□□□□□ -0.01
SCARB2-223ENST00000640640 WDYHV1Q96HA8 205 aa14.97□□□□□ -0.01
SCARB2-223ENST00000640640 TMUB1Q9BVT8 246 aa14.97□□□□□ -0.01
SCARB2-223ENST00000640640 TLNRD1Q9H1K6 362 aa14.97□□□□□ -0.01
SCARB2-223ENST00000640640 HEATR1Q9H583 2144 aaKnown RBP14.97□□□□□ -0.01
SCARB2-223ENST00000640640 MPDU1O75352 247 aa14.97□□□□□ -0.01
SCARB2-223ENST00000640640 CEACAM1P13688 526 aa14.97□□□□□ -0.01
SCARB2-223ENST00000640640 TMPRSS3P57727 454 aa14.97□□□□□ -0.01
SCARB2-223ENST00000640640 ZNF596Q8TC21 504 aa14.97□□□□□ -0.01
SCARB2-223ENST00000640640 HEATR5AQ86XA9 2040 aa14.97□□□□□ -0.01
SCARB2-223ENST00000640640 MPDZO75970 2070 aa14.97□□□□□ -0.01
SCARB2-223ENST00000640640 M0QZ24 198 aa14.97□□□□□ -0.01
SCARB2-223ENST00000640640 S1PR2O95136 353 aa14.97□□□□□ -0.01
SCARB2-223ENST00000640640 PMCHP20382 165 aa14.97□□□□□ -0.01
SCARB2-223ENST00000640640 LSM10Q969L4 123 aaKnown RBP14.97□□□□□ -0.01
SCARB2-223ENST00000640640 LURAP1Q96LR2 239 aa14.97□□□□□ -0.01
SCARB2-223ENST00000640640 FER1L5A0AVI2 2057 aa14.96□□□□□ -0.01
SCARB2-223ENST00000640640 GPR6P46095 362 aaPredicted RBP14.96□□□□□ -0.01
SCARB2-223ENST00000640640 DOLPP1Q86YN1 238 aa14.96□□□□□ -0.01
SCARB2-223ENST00000640640 ZNRF1Q8ND25 227 aa14.96□□□□□ -0.01
SCARB2-223ENST00000640640 WBP1Q96G27 269 aa14.96□□□□□ -0.01
SCARB2-223ENST00000640640 LYZL4Q96KX0 146 aa14.96□□□□□ -0.01
SCARB2-223ENST00000640640 RASL11BQ9BPW5 248 aa14.96□□□□□ -0.01
SCARB2-223ENST00000640640 RTBDNQ9BSG5 229 aaPredicted RBP14.96□□□□□ -0.01
SCARB2-223ENST00000640640 IGHV3-72A0A0B4J1Y9 119 aa14.96□□□□□ -0.01
SCARB2-223ENST00000640640 SFTPCP11686 197 aa14.96□□□□□ -0.01
SCARB2-223ENST00000640640 GAMTQ14353 236 aa14.96□□□□□ -0.01
SCARB2-223ENST00000640640 RPEL1Q2QD12 228 aa14.96□□□□□ -0.01
SCARB2-223ENST00000640640 SLC35E4Q6ICL7 350 aa14.96□□□□□ -0.01
SCARB2-223ENST00000640640 ASCL3Q9NQ33 180 aa14.96□□□□□ -0.01
SCARB2-223ENST00000640640 AURKAIP1Q9NWT8 199 aaPredicted RBP14.96□□□□□ -0.01
SCARB2-223ENST00000640640 PXMP4Q9Y6I8 212 aa14.96□□□□□ -0.01
SCARB2-223ENST00000640640 MC5RP33032 325 aa14.96□□□□□ -0.01
SCARB2-223ENST00000640640 LGALS7P47929 136 aa14.96□□□□□ -0.01
SCARB2-223ENST00000640640 ZIC4Q8N9L1 334 aa14.96□□□□□ -0.01
SCARB2-223ENST00000640640 LEAP2Q969E1 77 aa14.96□□□□□ -0.01
SCARB2-223ENST00000640640 PINLYPA6NC86 204 aa14.96□□□□□ -0.02
SCARB2-223ENST00000640640 S100A4P26447 101 aaKnown RBP14.96□□□□□ -0.02
SCARB2-223ENST00000640640 CAMPP49913 170 aa14.96□□□□□ -0.02
SCARB2-223ENST00000640640 C10orf113Q5VZT2 155 aa14.96□□□□□ -0.02
SCARB2-223ENST00000640640 DOPEY2Q9Y3R5 2298 aa14.95□□□□□ -0.02
SCARB2-223ENST00000640640 HELTA6NFD8 242 aa14.95□□□□□ -0.02
SCARB2-223ENST00000640640 F2RL2O00254 374 aa14.95□□□□□ -0.02
SCARB2-223ENST00000640640 CD59P13987 128 aa14.95□□□□□ -0.02
SCARB2-223ENST00000640640 IGHV1-2P23083 117 aa14.95□□□□□ -0.02
SCARB2-223ENST00000640640 DHRS7BQ6IAN0 325 aaPredicted RBP14.95□□□□□ -0.02
SCARB2-223ENST00000640640 GBF1Q92538 1859 aa14.95□□□□□ -0.02
SCARB2-223ENST00000640640 KIAA2026Q5HYC2 2103 aa14.95□□□□□ -0.02
SCARB2-223ENST00000640640 ZG16O60844 167 aa14.95□□□□□ -0.02
SCARB2-223ENST00000640640 TCL1AP56279 114 aa14.95□□□□□ -0.02
SCARB2-223ENST00000640640 FAM27E3Q08E93 113 aa14.95□□□□□ -0.02
SCARB2-223ENST00000640640 NCMAPQ5T1S8 102 aa14.95□□□□□ -0.02
SCARB2-223ENST00000640640 C1orf162Q8NEQ5 155 aaPredicted RBP14.95□□□□□ -0.02
SCARB2-223ENST00000640640 TMEM140Q9NV12 185 aa14.95□□□□□ -0.02
SCARB2-223ENST00000640640 COA4Q9NYJ1 87 aa14.95□□□□□ -0.02
SCARB2-223ENST00000640640 PGA5P0DJD9 388 aa14.95□□□□□ -0.02
SCARB2-223ENST00000640640 RPL27AP46776 148 aaKnown RBP14.95□□□□□ -0.02
SCARB2-223ENST00000640640 MEF2BQ02080 365 aaPredicted RBP14.95□□□□□ -0.02
SCARB2-223ENST00000640640 STXBP6Q8NFX7 210 aa14.95□□□□□ -0.02
SCARB2-223ENST00000640640 NOL4LQ96MY1 436 aaPredicted RBP14.95□□□□□ -0.02
SCARB2-223ENST00000640640 IDI2-AS1Q9NZ38 188 aa14.95□□□□□ -0.02
SCARB2-223ENST00000640640 NDUFA2O43678 99 aa14.94□□□□□ -0.02
SCARB2-223ENST00000640640 ID4P47928 161 aa14.94□□□□□ -0.02
SCARB2-223ENST00000640640 SH3BGRL3Q9H299 93 aa14.94□□□□□ -0.02
SCARB2-223ENST00000640640 MPTX1A8MV57 137 aa14.94□□□□□ -0.02
SCARB2-223ENST00000640640 SEC14L6B5MCN3 397 aa14.94□□□□□ -0.02
SCARB2-223ENST00000640640 C12orf77C9JDV5 145 aa14.94□□□□□ -0.02
SCARB2-223ENST00000640640 RPL8P62917 257 aaKnown RBP14.94□□□□□ -0.02
SCARB2-223ENST00000640640 ZNF273Q14593 569 aa14.94□□□□□ -0.02
SCARB2-223ENST00000640640 VOPP1Q96AW1 172 aa14.94□□□□□ -0.02
SCARB2-223ENST00000640640 IL36RNQ9UBH0 155 aa14.94□□□□□ -0.02
SCARB2-223ENST00000640640 ABCA4P78363 2273 aa14.94□□□□□ -0.02
SCARB2-223ENST00000640640 IFNL4K9M1U5 179 aa14.94□□□□□ -0.02
SCARB2-223ENST00000640640 ERVFRD-1P60508 538 aa14.94□□□□□ -0.02
SCARB2-223ENST00000640640 PCGF1Q9BSM1 259 aa14.94□□□□□ -0.02
SCARB2-223ENST00000640640 CELA3BP08861 270 aa14.94□□□□□ -0.02
SCARB2-223ENST00000640640 UCP1P25874 307 aa14.94□□□□□ -0.02
SCARB2-223ENST00000640640 OR10J1P30954 320 aa14.94□□□□□ -0.02
SCARB2-223ENST00000640640 FHITP49789 147 aa14.94□□□□□ -0.02
SCARB2-223ENST00000640640 HSPE1P61604 102 aaKnown RBP14.94□□□□□ -0.02
SCARB2-223ENST00000640640 SUMO1P63165 101 aaKnown RBP14.94□□□□□ -0.02
SCARB2-223ENST00000640640 PERPQ96FX8 193 aa14.94□□□□□ -0.02
SCARB2-223ENST00000640640 FAM74A7A6NL05 159 aa14.93□□□□□ -0.02
SCARB2-223ENST00000640640 CCDC144NLQ6NUI1 221 aa14.93□□□□□ -0.02
SCARB2-223ENST00000640640 FAM89BQ8N5H3 189 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms