RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 CDH20Q9HBT6 801 aa13.88□□□□□ -0.19
HNRNPU-228ENST00000640306 TMEM242Q9NWH2 141 aa13.88□□□□□ -0.19
HNRNPU-228ENST00000640306 KCNIP1Q9NZI2 227 aa13.88□□□□□ -0.19
HNRNPU-228ENST00000640306 POLDIP2Q9Y2S7 368 aa13.88□□□□□ -0.19
HNRNPU-228ENST00000640306 ICE1Q9Y2F5 2266 aa13.88□□□□□ -0.19
HNRNPU-228ENST00000640306 NPIPB11E5RHQ5 1161 aa13.88□□□□□ -0.19
HNRNPU-228ENST00000640306 MPV17P39210 176 aa13.88□□□□□ -0.19
HNRNPU-228ENST00000640306 BRWD1-AS2P59051 145 aa13.88□□□□□ -0.19
HNRNPU-228ENST00000640306 ERVK11-1P61568 191 aa13.88□□□□□ -0.19
HNRNPU-228ENST00000640306 PSG7Q13046 419 aa13.88□□□□□ -0.19
HNRNPU-228ENST00000640306 SLC10A1Q14973 349 aa13.88□□□□□ -0.19
HNRNPU-228ENST00000640306 ZNF600Q6ZNG1 722 aa13.88□□□□□ -0.19
HNRNPU-228ENST00000640306 Q6ZR03 302 aa13.88□□□□□ -0.19
HNRNPU-228ENST00000640306 SSX9Q7RTT3 188 aa13.88□□□□□ -0.19
HNRNPU-228ENST00000640306 DTD1Q8TEA8 209 aa13.88□□□□□ -0.19
HNRNPU-228ENST00000640306 RAB24Q969Q5 203 aa13.88□□□□□ -0.19
HNRNPU-228ENST00000640306 GALMQ96C23 342 aa13.88□□□□□ -0.19
HNRNPU-228ENST00000640306 GPR87Q9BY21 358 aa13.88□□□□□ -0.19
HNRNPU-228ENST00000640306 GP6Q9HCN6 339 aa13.88□□□□□ -0.19
HNRNPU-228ENST00000640306 METRNQ9UJH8 293 aa13.88□□□□□ -0.19
HNRNPU-228ENST00000640306 GATCO43716 136 aaKnown RBP13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 SOX15O60248 233 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 KBTBD11O94819 623 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 AGFG2O95081 481 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 HBZP02008 142 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 COL8A2P25067 703 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 CHRNA7P36544 502 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 PRAMEF6Q5VXH4 476 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 CYP2G1PQ6ZSU1 146 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 MBNL3Q9NUK0 354 aaKnown RBP13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 LRRC30A6NM36 301 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 IFNL4K9M1U5 179 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 PFN1P07737 140 aaKnown RBP13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 ARG2P78540 354 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 ALKBH2Q6NS38 261 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 ZNF645Q8N7E2 425 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 OR10P1Q8NGE3 313 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 TMEM204Q9BSN7 226 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 A0A1B0GV90 55 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 XKRY2A2RUG3 117 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 ST8SIA5O15466 376 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 SP1P08047 785 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 ACP1P24666 158 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 FAM3BP58499 235 aaPredicted RBP13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 NANOS1Q8WY41 292 aaKnown RBP13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 OR5B12Q96R08 314 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 SPRR3Q9UBC9 169 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 HSPB7Q9UBY9 170 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 FUT9Q9Y231 359 aa13.87□□□□□ -0.19
HNRNPU-228ENST00000640306 TRAV38-1A0A0B4J264 116 aa13.86□□□□□ -0.19
HNRNPU-228ENST00000640306 PGPEP1LA6NFU8 196 aa13.86□□□□□ -0.19
HNRNPU-228ENST00000640306 ZNF705GA8MUZ8 300 aaPredicted RBP13.86□□□□□ -0.19
HNRNPU-228ENST00000640306 PPP5D1E7EU14 171 aa13.86□□□□□ -0.19
HNRNPU-228ENST00000640306 UBE2NP61088 152 aaKnown RBP13.86□□□□□ -0.19
HNRNPU-228ENST00000640306 Q3ZCU0 254 aa13.86□□□□□ -0.19
HNRNPU-228ENST00000640306 FIP1L1Q6UN15 594 aaKnown RBP13.86□□□□□ -0.19
HNRNPU-228ENST00000640306 NINJ1Q92982 152 aa13.86□□□□□ -0.19
HNRNPU-228ENST00000640306 SDSLQ96GA7 329 aa13.86□□□□□ -0.19
HNRNPU-228ENST00000640306 PITPNC1Q9UKF7 332 aa13.86□□□□□ -0.19
HNRNPU-228ENST00000640306 CDX4O14627 284 aaPredicted RBP13.86□□□□□ -0.19
HNRNPU-228ENST00000640306 WISP2O76076 250 aa13.86□□□□□ -0.19
HNRNPU-228ENST00000640306 AMBPP02760 352 aa13.86□□□□□ -0.19
HNRNPU-228ENST00000640306 MAP1BP46821 2468 aaKnown RBP13.86□□□□□ -0.19
HNRNPU-228ENST00000640306 EDDM3AQ14507 147 aa13.86□□□□□ -0.19
HNRNPU-228ENST00000640306 MSL2Q9HCI7 577 aa13.86□□□□□ -0.19
HNRNPU-228ENST00000640306 A0A087X0M5 115 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 CTXND1A0A1B0GTU2 59 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 A0A1B0GX30 115 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 LINC00473A8K010 186 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 RNF224P0DH78 156 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 ZNF146Q15072 292 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 MSMO1Q15800 293 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 H2BFWTQ7Z2G1 175 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 ZNF709Q8N972 641 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 TMEM147Q9BVK8 224 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 NPCDR1Q9BY65 106 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 CTDSP1Q9GZU7 261 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 SRD5A3Q9H8P0 318 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 PSG11Q9UQ72 335 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 WIPI2Q9Y4P8 454 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 LAMA5O15230 3695 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 PIGBOS1A0A0B4J2F0 54 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 TMEM30CPA0ZSE6 113 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 RNF212BA8MTL3 300 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 GYPAP02724 150 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 CST9LP1Q5W188 147 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 DERL1Q9BUN8 251 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 WASF3Q9UPY6 502 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 RP1L1Q8IWN7 2480 aaPredicted RBP13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 CADP27708 2225 aa13.85□□□□□ -0.19
HNRNPU-228ENST00000640306 HNF1AP20823 631 aa13.84□□□□□ -0.19
HNRNPU-228ENST00000640306 DDTP30046 118 aa13.84□□□□□ -0.19
HNRNPU-228ENST00000640306 EDDM3BP56851 147 aa13.84□□□□□ -0.19
HNRNPU-228ENST00000640306 Q8IYB0 196 aa13.84□□□□□ -0.19
HNRNPU-228ENST00000640306 NPPCP23582 126 aa13.84□□□□□ -0.19
HNRNPU-228ENST00000640306 FABP6P51161 128 aa13.84□□□□□ -0.19
HNRNPU-228ENST00000640306 PLA2G2CQ5R387 149 aa13.84□□□□□ -0.19
HNRNPU-228ENST00000640306 TMEM183AQ8IXX5 376 aa13.84□□□□□ -0.19
HNRNPU-228ENST00000640306 VKORC1L1Q8N0U8 176 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms