RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 ICE1Q9Y2F5 2266 aa7.8□□□□□ -1.16
NECAP1-225ENST00000640209 SMG1Q96Q15 3661 aaKnown RBP7.8□□□□□ -1.16
NECAP1-225ENST00000640209 RNF212BA8MTL3 300 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 HMGB3O15347 200 aaKnown RBP7.79□□□□□ -1.16
NECAP1-225ENST00000640209 ZNF737O75373 536 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 HBE1P02100 147 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 CXCL1P09341 107 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 GCH1P30793 250 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 PRDX2P32119 198 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 KHDC3LQ587J8 217 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 ACSM6Q6P461 480 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 HEPN1Q6WQI6 88 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 MBD3L1Q8WWY6 194 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 TAF15Q92804 592 aaKnown RBP eCLIP7.79□□□□□ -1.16
NECAP1-225ENST00000640209 DUSP13Q9UII6 198 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 A0A1B0GWJ7 208 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 K7EM74 188 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 IFNA4P05014 189 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 MAS1LP35410 378 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 MEOX2P50222 304 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 ERVFRD-1P60508 538 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 RAB11AP62491 216 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 HBG1P69891 147 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 HBG2P69892 147 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 SMIM21Q3B7S5 101 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 FAM201AQ5SY85 155 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 NCR3LG1Q68D85 454 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 ZNF474Q6S9Z5 364 aaPredicted RBP7.79□□□□□ -1.16
NECAP1-225ENST00000640209 RPP25LQ8N5L8 163 aaKnown RBP7.79□□□□□ -1.16
NECAP1-225ENST00000640209 ZBTB34Q8NCN2 500 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 Q8WTZ3 238 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 CA5BP1Q8WTZ4 195 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 PSMG3Q9BT73 122 aaPredicted RBP7.79□□□□□ -1.16
NECAP1-225ENST00000640209 TMPRSS5Q9H3S3 457 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 URGCP-MRPS24S4R325 110 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 ZNF318Q5VUA4 2279 aa7.79□□□□□ -1.16
NECAP1-225ENST00000640209 TGIF2-C20orf24A0A0A6YYL0 155 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 PIGBOS1A0A0B4J2F0 54 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 AHRRA9YTQ3 701 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 FAM90A26D6RGX4 464 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 UBE2CO00762 179 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 IGHV2-5P01817 119 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 OPN1MWP04001 364 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 OR8U8P0C7N1 319 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 OPN1MW2P0DN77 364 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 OPN1MW3P0DN78 364 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 BCL2P10415 239 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 DEFA4P12838 97 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 SELLP14151 372 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 NQO2P16083 231 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 TFF3Q07654 80 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 FABP9Q0Z7S8 132 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 TMEM41BQ5BJD5 291 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 CLEC2AQ6UVW9 174 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 C1orf229Q6ZS94 237 aaPredicted RBP7.78□□□□□ -1.16
NECAP1-225ENST00000640209 C22orf34Q6ZV56 151 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 NINJ1Q92982 152 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 TVP23CQ96ET8 276 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 LURAP1Q96LR2 239 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 CISD1Q9NZ45 108 aaKnown RBP7.78□□□□□ -1.16
NECAP1-225ENST00000640209 IFNL4K9M1U5 179 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 CEACAM4O75871 244 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 OR9G9P0C7N8 305 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 ELOBQ15370 118 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 VHLLQ6RSH7 139 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 SLC16A13Q7RTY0 426 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 GCSAMQ8N6F7 178 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 SNIP1Q8TAD8 396 aaKnown RBP7.78□□□□□ -1.16
NECAP1-225ENST00000640209 Q8TCH9 128 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 GATAD1Q8WUU5 269 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 S100PBPQ96BU1 408 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 MALSU1Q96EH3 234 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.78□□□□□ -1.16
NECAP1-225ENST00000640209 FAM215AQ9Y5M1 114 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 AKAP13Q12802 2813 aa7.78□□□□□ -1.16
NECAP1-225ENST00000640209 MAP1LC3B2A6NCE7 125 aa7.77□□□□□ -1.17
NECAP1-225ENST00000640209 MBD3L4A6NDZ8 208 aaPredicted RBP7.77□□□□□ -1.17
NECAP1-225ENST00000640209 MBD3L3A6NE82 208 aaPredicted RBP7.77□□□□□ -1.17
NECAP1-225ENST00000640209 MBD3L5A6NJ08 208 aaPredicted RBP7.77□□□□□ -1.17
NECAP1-225ENST00000640209 B9A039 149 aa7.77□□□□□ -1.17
NECAP1-225ENST00000640209 M0R1B8 84 aa7.77□□□□□ -1.17
NECAP1-225ENST00000640209 CLDN14O95500 239 aa7.77□□□□□ -1.17
NECAP1-225ENST00000640209 ZNF134P52741 427 aa7.77□□□□□ -1.17
NECAP1-225ENST00000640209 CATR1Q13166 79 aa7.77□□□□□ -1.17
NECAP1-225ENST00000640209 MSMO1Q15800 293 aa7.77□□□□□ -1.17
NECAP1-225ENST00000640209 DUX4L9Q6RFH8 374 aaPredicted RBP7.77□□□□□ -1.17
NECAP1-225ENST00000640209 ZNRF1Q8ND25 227 aa7.77□□□□□ -1.17
NECAP1-225ENST00000640209 MBD3L2Q8NHZ7 208 aaPredicted RBP7.77□□□□□ -1.17
NECAP1-225ENST00000640209 DTD1Q8TEA8 209 aa7.77□□□□□ -1.17
NECAP1-225ENST00000640209 NIPSNAP3BQ9BS92 247 aa7.77□□□□□ -1.17
NECAP1-225ENST00000640209 QTRT1Q9BXR0 403 aaKnown RBP7.77□□□□□ -1.17
NECAP1-225ENST00000640209 MAP1LC3BQ9GZQ8 125 aa7.77□□□□□ -1.17
NECAP1-225ENST00000640209 FAM234AQ9H0X4 552 aa7.77□□□□□ -1.17
NECAP1-225ENST00000640209 UNKLQ9H9P5 680 aaKnown RBP7.77□□□□□ -1.17
NECAP1-225ENST00000640209 BSNQ9UPA5 3926 aa7.77□□□□□ -1.17
NECAP1-225ENST00000640209 SRRM5B3KS81 715 aa7.77□□□□□ -1.17
NECAP1-225ENST00000640209 TM4SF5O14894 197 aa7.77□□□□□ -1.17
NECAP1-225ENST00000640209 RAB29O14966 203 aa7.77□□□□□ -1.17
NECAP1-225ENST00000640209 SLC31A2O15432 143 aa7.77□□□□□ -1.17
NECAP1-225ENST00000640209 RPS10P46783 165 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms