RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 OR10J3Q5JRS4 329 aa10.29□□□□□ -0.76
GFAP-228ENST00000638488 TAF15Q92804 592 aaKnown RBP eCLIP10.29□□□□□ -0.76
GFAP-228ENST00000638488 C10orf35Q96D05 121 aa10.29□□□□□ -0.76
GFAP-228ENST00000638488 KCNS1Q96KK3 526 aa10.29□□□□□ -0.76
GFAP-228ENST00000638488 SF3B5Q9BWJ5 86 aaKnown RBP10.29□□□□□ -0.76
GFAP-228ENST00000638488 SHANK1Q9Y566 2161 aa10.29□□□□□ -0.76
GFAP-228ENST00000638488 IGHV1-45A0A0A0MS14 117 aa10.28□□□□□ -0.76
GFAP-228ENST00000638488 MDFIC2A0A1B0GVS7 189 aa10.28□□□□□ -0.76
GFAP-228ENST00000638488 H3BP45 60 aa10.28□□□□□ -0.76
GFAP-228ENST00000638488 TNFSF12O43508 249 aa10.28□□□□□ -0.76
GFAP-228ENST00000638488 TNFSF15O95150 251 aa10.28□□□□□ -0.76
GFAP-228ENST00000638488 IGKV1D-33P01593 117 aa10.28□□□□□ -0.76
GFAP-228ENST00000638488 IGKV1-33P01594 117 aa10.28□□□□□ -0.76
GFAP-228ENST00000638488 CBLN1P23435 193 aa10.28□□□□□ -0.76
GFAP-228ENST00000638488 OR4A47Q6IF82 309 aa10.28□□□□□ -0.76
GFAP-228ENST00000638488 FAM71F2Q6NXP2 309 aa10.28□□□□□ -0.76
GFAP-228ENST00000638488 PET117Q6UWS5 81 aa10.28□□□□□ -0.76
GFAP-228ENST00000638488 ZNF596Q8TC21 504 aa10.28□□□□□ -0.76
GFAP-228ENST00000638488 CHCHD2Q9Y6H1 151 aaPredicted RBP10.28□□□□□ -0.76
GFAP-228ENST00000638488 KIAA1324LA8MWY0 1029 aaPredicted RBP10.28□□□□□ -0.76
GFAP-228ENST00000638488 SIRPB1O00241 398 aa10.28□□□□□ -0.76
GFAP-228ENST00000638488 S1PR2O95136 353 aa10.28□□□□□ -0.76
GFAP-228ENST00000638488 AMTP48728 403 aa10.28□□□□□ -0.76
GFAP-228ENST00000638488 DUSP3P51452 185 aaPredicted RBP10.28□□□□□ -0.76
GFAP-228ENST00000638488 GRB2P62993 217 aaKnown RBP10.28□□□□□ -0.76
GFAP-228ENST00000638488 MRPL49Q13405 166 aaKnown RBP10.28□□□□□ -0.76
GFAP-228ENST00000638488 FAM180AQ6UWF9 173 aa10.28□□□□□ -0.76
GFAP-228ENST00000638488 PRSS57Q6UWY2 283 aa10.28□□□□□ -0.76
GFAP-228ENST00000638488 Q6ZSR3 168 aa10.28□□□□□ -0.76
GFAP-228ENST00000638488 FAM103A1Q9BTL3 118 aaKnown RBP10.28□□□□□ -0.76
GFAP-228ENST00000638488 LRFN3Q9BTN0 628 aa10.28□□□□□ -0.76
GFAP-228ENST00000638488 MEGF9Q9H1U4 602 aa10.28□□□□□ -0.76
GFAP-228ENST00000638488 SDK2Q58EX2 2172 aa10.27□□□□□ -0.76
GFAP-228ENST00000638488 IGHV3-15A0A0B4J1V0 119 aa10.27□□□□□ -0.76
GFAP-228ENST00000638488 C9orf172C9J069 976 aa10.27□□□□□ -0.76
GFAP-228ENST00000638488 H0Y980 276 aa10.27□□□□□ -0.76
GFAP-228ENST00000638488 DEGS1O15121 323 aa10.27□□□□□ -0.76
GFAP-228ENST00000638488 DHRS3O75911 302 aa10.27□□□□□ -0.76
GFAP-228ENST00000638488 CCL3P10147 92 aa10.27□□□□□ -0.76
GFAP-228ENST00000638488 KITLGP21583 273 aa10.27□□□□□ -0.76
GFAP-228ENST00000638488 NPPCP23582 126 aa10.27□□□□□ -0.76
GFAP-228ENST00000638488 MFAP5Q13361 173 aa10.27□□□□□ -0.76
GFAP-228ENST00000638488 OR52L2PQ8NGH6 319 aa10.27□□□□□ -0.76
GFAP-228ENST00000638488 OR4P4Q8NGL7 312 aa10.27□□□□□ -0.76
GFAP-228ENST00000638488 C1QTNF9BB2RNN3 333 aa10.27□□□□□ -0.77
GFAP-228ENST00000638488 C11orf94C9JXX5 98 aa10.27□□□□□ -0.77
GFAP-228ENST00000638488 F2Z2F3 143 aa10.27□□□□□ -0.77
GFAP-228ENST00000638488 NTN3O00634 580 aaPredicted RBP10.27□□□□□ -0.77
GFAP-228ENST00000638488 TAX1BP3O14907 124 aa10.27□□□□□ -0.77
GFAP-228ENST00000638488 PAGE4O60829 102 aa10.27□□□□□ -0.77
GFAP-228ENST00000638488 KLF7O75840 302 aaPredicted RBP10.27□□□□□ -0.77
GFAP-228ENST00000638488 NXPH3O95157 252 aa10.27□□□□□ -0.77
GFAP-228ENST00000638488 C3orf79P0CE67 100 aa10.27□□□□□ -0.77
GFAP-228ENST00000638488 COX6A1P12074 109 aa10.27□□□□□ -0.77
GFAP-228ENST00000638488 OTX2P32243 289 aa10.27□□□□□ -0.77
GFAP-228ENST00000638488 ARL16Q0P5N6 197 aa10.27□□□□□ -0.77
GFAP-228ENST00000638488 HLA-DRB5Q30154 266 aa10.27□□□□□ -0.77
GFAP-228ENST00000638488 STUMQ69YW2 141 aa10.27□□□□□ -0.77
GFAP-228ENST00000638488 CFAP161Q6P656 301 aa10.27□□□□□ -0.77
GFAP-228ENST00000638488 LIN37Q96GY3 246 aaPredicted RBP10.27□□□□□ -0.77
GFAP-228ENST00000638488 PNRC2Q9NPJ4 139 aaKnown RBP10.27□□□□□ -0.77
GFAP-228ENST00000638488 C1QTNF9P0C862 333 aa10.26□□□□□ -0.77
GFAP-228ENST00000638488 CTSSP25774 331 aa10.26□□□□□ -0.77
GFAP-228ENST00000638488 RHOBP62745 196 aa10.26□□□□□ -0.77
GFAP-228ENST00000638488 TMEM211Q6ICI0 200 aa10.26□□□□□ -0.77
GFAP-228ENST00000638488 HAPLN4Q86UW8 402 aa10.26□□□□□ -0.77
GFAP-228ENST00000638488 OR4S2Q8NH73 311 aa10.26□□□□□ -0.77
GFAP-228ENST00000638488 SLC25A22Q9H936 323 aa10.26□□□□□ -0.77
GFAP-228ENST00000638488 WDR54Q9H977 334 aa10.26□□□□□ -0.77
GFAP-228ENST00000638488 GNB4Q9HAV0 340 aa10.26□□□□□ -0.77
GFAP-228ENST00000638488 TRAV9-2A0A087WT02 112 aa10.26□□□□□ -0.77
GFAP-228ENST00000638488 ZNF324O75467 553 aaPredicted RBP10.26□□□□□ -0.77
GFAP-228ENST00000638488 ANOS1P23352 680 aa10.26□□□□□ -0.77
GFAP-228ENST00000638488 FOLR3P41439 243 aa10.26□□□□□ -0.77
GFAP-228ENST00000638488 CLDN15P56746 228 aa10.26□□□□□ -0.77
GFAP-228ENST00000638488 ZNF90Q03938 601 aa10.26□□□□□ -0.77
GFAP-228ENST00000638488 MYO7BQ6PIF6 2116 aa10.26□□□□□ -0.77
GFAP-228ENST00000638488 GATAD1Q8WUU5 269 aa10.26□□□□□ -0.77
GFAP-228ENST00000638488 PIGTQ969N2 578 aa10.26□□□□□ -0.77
GFAP-228ENST00000638488 LYZL4Q96KX0 146 aa10.26□□□□□ -0.77
GFAP-228ENST00000638488 OR4C12Q96R67 309 aa10.26□□□□□ -0.77
GFAP-228ENST00000638488 PSENENQ9NZ42 101 aa10.26□□□□□ -0.77
GFAP-228ENST00000638488 IL36BQ9NZH7 164 aa10.26□□□□□ -0.77
GFAP-228ENST00000638488 GAGE12BA1L429 117 aa10.25□□□□□ -0.77
GFAP-228ENST00000638488 FCN1O00602 326 aa10.25□□□□□ -0.77
GFAP-228ENST00000638488 IGHG1P01857 330 aa10.25□□□□□ -0.77
GFAP-228ENST00000638488 MT-ND6P03923 174 aa10.25□□□□□ -0.77
GFAP-228ENST00000638488 CLDN17P56750 224 aa10.25□□□□□ -0.77
GFAP-228ENST00000638488 OR10G8Q8NGN5 311 aa10.25□□□□□ -0.77
GFAP-228ENST00000638488 RNF138Q8WVD3 245 aa10.25□□□□□ -0.77
GFAP-228ENST00000638488 GNB1LQ9BYB4 327 aa10.25□□□□□ -0.77
GFAP-228ENST00000638488 ARRDC1-AS1Q9H2J1 176 aa10.25□□□□□ -0.77
GFAP-228ENST00000638488 CELSR3Q9NYQ7 3312 aa10.25□□□□□ -0.77
GFAP-228ENST00000638488 A0A1W2PS18 150 aa10.25□□□□□ -0.77
GFAP-228ENST00000638488 SYNGR2O43760 224 aa10.25□□□□□ -0.77
GFAP-228ENST00000638488 TIMP3P35625 211 aa10.25□□□□□ -0.77
GFAP-228ENST00000638488 SSR4P51571 173 aa10.25□□□□□ -0.77
GFAP-228ENST00000638488 GNB1P62873 340 aa10.25□□□□□ -0.77
GFAP-228ENST00000638488 PSG4Q00888 419 aa10.25□□□□□ -0.77
GFAP-228ENST00000638488 DMRTC1Q5HYR2 192 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms