RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 ZNF134P52741 427 aa17.84■□□□□ 0.45
CLN6-224ENST00000638076 DEFB108BQ8NET1 73 aa17.84■□□□□ 0.45
CLN6-224ENST00000638076 KIAA1456Q9P272 454 aa17.84■□□□□ 0.45
CLN6-224ENST00000638076 MAP1BP46821 2468 aaKnown RBP17.84■□□□□ 0.45
CLN6-224ENST00000638076 SLC38A11Q08AI6 406 aa17.83■□□□□ 0.45
CLN6-224ENST00000638076 CD300LFQ8TDQ1 290 aa17.83■□□□□ 0.45
CLN6-224ENST00000638076 OR4C12Q96R67 309 aa17.83■□□□□ 0.45
CLN6-224ENST00000638076 ZGRF1Q86YA3 2104 aa17.83■□□□□ 0.44
CLN6-224ENST00000638076 ICE1Q9Y2F5 2266 aa17.83■□□□□ 0.44
CLN6-224ENST00000638076 PPIHO43447 177 aaKnown RBP17.83■□□□□ 0.44
CLN6-224ENST00000638076 ZG16O60844 167 aa17.83■□□□□ 0.44
CLN6-224ENST00000638076 FCGR3BO75015 233 aa17.83■□□□□ 0.44
CLN6-224ENST00000638076 PTAFRP25105 342 aa17.83■□□□□ 0.44
CLN6-224ENST00000638076 STUMQ69YW2 141 aa17.83■□□□□ 0.44
CLN6-224ENST00000638076 ZDHHC16Q969W1 377 aa17.83■□□□□ 0.44
CLN6-224ENST00000638076 SNRNP40Q96DI7 357 aaKnown RBP17.83■□□□□ 0.44
CLN6-224ENST00000638076 SDSLQ96GA7 329 aa17.83■□□□□ 0.44
CLN6-224ENST00000638076 SMDT1Q9H4I9 107 aa17.83■□□□□ 0.44
CLN6-224ENST00000638076 C17orf58Q2M2W7 97 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 PRR30Q53SZ7 412 aaPredicted RBP17.82■□□□□ 0.44
CLN6-224ENST00000638076 RPL39P5Q59GN2 51 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 DTD1Q8TEA8 209 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 R3HDM4Q96D70 268 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 PSMG3Q9BT73 122 aaPredicted RBP17.82■□□□□ 0.44
CLN6-224ENST00000638076 WDR61Q9GZS3 305 aaKnown RBP17.82■□□□□ 0.44
CLN6-224ENST00000638076 DPRXA6NFQ7 191 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 H7C2Y5 167 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 K7ENP7 123 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 M0R1X1 148 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 OR8U8P0C7N1 319 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 CGB3P0DN86 165 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 CGB7P0DN87 165 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 AKR1C3P42330 323 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 HAGHQ16775 308 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 AWAT1Q58HT5 328 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 TGIF2LYQ8IUE0 185 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 FAM216AQ8WUB2 273 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 FAM234AQ9H0X4 552 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 HIPK2Q9H2X6 1198 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 IFI27L2Q9H2X8 130 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 VSIRQ9H7M9 311 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 RPS10P5Q9NQ39 176 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 RPRMQ9NS64 109 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 ZNF835Q9Y2P0 537 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 DSCAMO60469 2012 aa17.82■□□□□ 0.44
CLN6-224ENST00000638076 CUL9Q8IWT3 2517 aa17.81■□□□□ 0.44
CLN6-224ENST00000638076 UBE2L5PA0A1B0GUS4 154 aa17.81■□□□□ 0.44
CLN6-224ENST00000638076 UTF1Q5T230 341 aa17.81■□□□□ 0.44
CLN6-224ENST00000638076 Q8TCH9 128 aa17.81■□□□□ 0.44
CLN6-224ENST00000638076 NCOR1P1Q9H4R4 102 aa17.81■□□□□ 0.44
CLN6-224ENST00000638076 PLCE1Q9P212 2302 aa17.81■□□□□ 0.44
CLN6-224ENST00000638076 HBE1P02100 147 aa17.81■□□□□ 0.44
CLN6-224ENST00000638076 THBDP07204 575 aa17.81■□□□□ 0.44
CLN6-224ENST00000638076 CD55P08174 381 aa17.81■□□□□ 0.44
CLN6-224ENST00000638076 RAB2AP61019 212 aa17.81■□□□□ 0.44
CLN6-224ENST00000638076 LEAP2Q969E1 77 aa17.81■□□□□ 0.44
CLN6-224ENST00000638076 GAFA1Q96PS6 74 aa17.81■□□□□ 0.44
CLN6-224ENST00000638076 CCL13Q99616 98 aa17.81■□□□□ 0.44
CLN6-224ENST00000638076 AIFM2Q9BRQ8 373 aa17.81■□□□□ 0.44
CLN6-224ENST00000638076 PARD6GQ9BYG4 376 aaPredicted RBP17.81■□□□□ 0.44
CLN6-224ENST00000638076 JKAMPQ9P055 326 aa17.81■□□□□ 0.44
CLN6-224ENST00000638076 M0R036 132 aa17.8■□□□□ 0.44
CLN6-224ENST00000638076 SLC31A2O15432 143 aa17.8■□□□□ 0.44
CLN6-224ENST00000638076 HPRT1P00492 218 aa17.8■□□□□ 0.44
CLN6-224ENST00000638076 GYPAP02724 150 aa17.8■□□□□ 0.44
CLN6-224ENST00000638076 SNRNP70P08621 437 aaKnown RBP17.8■□□□□ 0.44
CLN6-224ENST00000638076 CCL8P80075 99 aa17.8■□□□□ 0.44
CLN6-224ENST00000638076 BSPH1Q075Z2 132 aa17.8■□□□□ 0.44
CLN6-224ENST00000638076 SPINK9Q5DT21 86 aa17.8■□□□□ 0.44
CLN6-224ENST00000638076 RBMXL1Q96E39 390 aaKnown RBP17.8■□□□□ 0.44
CLN6-224ENST00000638076 C20orf24Q9BUV8 137 aa17.8■□□□□ 0.44
CLN6-224ENST00000638076 DCAF16Q9NXF7 216 aa17.8■□□□□ 0.44
CLN6-224ENST00000638076 ADIPOQQ15848 244 aa17.8■□□□□ 0.44
CLN6-224ENST00000638076 TAF15Q92804 592 aaKnown RBP eCLIP17.8■□□□□ 0.44
CLN6-224ENST00000638076 SMCO4Q9NRQ5 59 aa17.8■□□□□ 0.44
CLN6-224ENST00000638076 PIEZO2Q9H5I5 2752 aa17.79■□□□□ 0.44
CLN6-224ENST00000638076 KBTBD11-OT1A0A1B0GTJ5 212 aa17.79■□□□□ 0.44
CLN6-224ENST00000638076 CEBPZOSA8MTT3 80 aa17.79■□□□□ 0.44
CLN6-224ENST00000638076 OR4A8P0C604 315 aa17.79■□□□□ 0.44
CLN6-224ENST00000638076 OR9G9P0C7N8 305 aa17.79■□□□□ 0.44
CLN6-224ENST00000638076 IRF2P14316 349 aa17.79■□□□□ 0.44
CLN6-224ENST00000638076 SERF2P84101 59 aa17.79■□□□□ 0.44
CLN6-224ENST00000638076 SOHLH1Q5JUK2 328 aa17.79■□□□□ 0.44
CLN6-224ENST00000638076 CLDND2Q8NHS1 167 aa17.79■□□□□ 0.44
CLN6-224ENST00000638076 CIB3Q96Q77 187 aaPredicted RBP17.79■□□□□ 0.44
CLN6-224ENST00000638076 QTRT1Q9BXR0 403 aaKnown RBP17.79■□□□□ 0.44
CLN6-224ENST00000638076 ZNF665Q9H7R5 613 aa17.79■□□□□ 0.44
CLN6-224ENST00000638076 TRGV10A0A0A0MS01 117 aa17.78■□□□□ 0.44
CLN6-224ENST00000638076 C7orf77A4D0Y5 90 aa17.78■□□□□ 0.44
CLN6-224ENST00000638076 FAM122CQ6P4D5 195 aa17.78■□□□□ 0.44
CLN6-224ENST00000638076 SSX9Q7RTT3 188 aa17.78■□□□□ 0.44
CLN6-224ENST00000638076 FAM216BQ8N7L0 139 aa17.78■□□□□ 0.44
CLN6-224ENST00000638076 COL25A1Q9BXS0 654 aaPredicted RBP17.78■□□□□ 0.44
CLN6-224ENST00000638076 RAB9BQ9NP90 201 aa17.78■□□□□ 0.44
CLN6-224ENST00000638076 GFOD1Q9NXC2 390 aa17.78■□□□□ 0.44
CLN6-224ENST00000638076 TRAV1-1A0A0B4J248 108 aa17.78■□□□□ 0.44
CLN6-224ENST00000638076 A0A1W2PPE3 182 aa17.78■□□□□ 0.44
CLN6-224ENST00000638076 PMS2P5A8MQ11 134 aa17.78■□□□□ 0.44
CLN6-224ENST00000638076 OR2B8PP59922 312 aa17.78■□□□□ 0.44
CLN6-224ENST00000638076 ICAM4Q14773 271 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms