RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 PUSL1Q8N0Z8 303 aaKnown RBP16.92■□□□□ 0.3
CACNA1A-257ENST00000638009 LRP6O75581 1613 aa16.92■□□□□ 0.3
CACNA1A-257ENST00000638009 APOMO95445 188 aa16.92■□□□□ 0.3
CACNA1A-257ENST00000638009 A0A1B0GTH9 108 aa16.92■□□□□ 0.3
CACNA1A-257ENST00000638009 NDUFB4O95168 129 aa16.92■□□□□ 0.3
CACNA1A-257ENST00000638009 PSG6Q00889 435 aa16.92■□□□□ 0.3
CACNA1A-257ENST00000638009 KLK10O43240 276 aa16.91■□□□□ 0.3
CACNA1A-257ENST00000638009 RPL31P62899 125 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-257ENST00000638009 PAX2Q02962 417 aa16.91■□□□□ 0.3
CACNA1A-257ENST00000638009 RIPPLY2Q5TAB7 128 aa16.91■□□□□ 0.3
CACNA1A-257ENST00000638009 C5orf30Q96GV9 206 aa16.91■□□□□ 0.3
CACNA1A-257ENST00000638009 NEU1Q99519 415 aa16.91■□□□□ 0.3
CACNA1A-257ENST00000638009 SF3B5Q9BWJ5 86 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-257ENST00000638009 TICRRQ7Z2Z1 1910 aa16.91■□□□□ 0.3
CACNA1A-257ENST00000638009 ELOVL5Q9NYP7 299 aa16.91■□□□□ 0.3
CACNA1A-257ENST00000638009 SLC25A10Q9UBX3 287 aaPredicted RBP16.91■□□□□ 0.3
CACNA1A-257ENST00000638009 DNM1P46Q6ZS02 220 aa16.91■□□□□ 0.3
CACNA1A-257ENST00000638009 TRAV8-4A0A0B4J246 113 aa16.91■□□□□ 0.3
CACNA1A-257ENST00000638009 MED19A0JLT2 244 aaPredicted RBP16.91■□□□□ 0.3
CACNA1A-257ENST00000638009 UCP3P55916 312 aa16.91■□□□□ 0.3
CACNA1A-257ENST00000638009 RPL8P62917 257 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-257ENST00000638009 LHFPL4Q7Z7J7 247 aa16.91■□□□□ 0.3
CACNA1A-257ENST00000638009 PLPP3O14495 311 aa16.91■□□□□ 0.3
CACNA1A-257ENST00000638009 DNAJC4Q9NNZ3 241 aa16.91■□□□□ 0.3
CACNA1A-257ENST00000638009 SRIP30626 198 aa16.9■□□□□ 0.3
CACNA1A-257ENST00000638009 MFRPQ9BY79 579 aa16.9■□□□□ 0.3
CACNA1A-257ENST00000638009 C2orf16Q68DN1 1984 aa16.9■□□□□ 0.3
CACNA1A-257ENST00000638009 OBSL1O75147 1896 aa16.9■□□□□ 0.3
CACNA1A-257ENST00000638009 ASPDHA6ND91 283 aa16.9■□□□□ 0.3
CACNA1A-257ENST00000638009 OR51G1Q8NGK1 321 aa16.9■□□□□ 0.3
CACNA1A-257ENST00000638009 ODAMA1E959 279 aa16.9■□□□□ 0.3
CACNA1A-257ENST00000638009 KLK8O60259 260 aa16.9■□□□□ 0.3
CACNA1A-257ENST00000638009 SBK3P0C264 359 aa16.9■□□□□ 0.3
CACNA1A-257ENST00000638009 TRBV20OR9-2A0A075B6H5 130 aa16.9■□□□□ 0.3
CACNA1A-257ENST00000638009 A0A0U1RQS6 177 aa16.9■□□□□ 0.3
CACNA1A-257ENST00000638009 FAM216AQ8WUB2 273 aa16.9■□□□□ 0.3
CACNA1A-257ENST00000638009 CHST5Q9GZS9 411 aa16.9■□□□□ 0.3
CACNA1A-257ENST00000638009 TSPO2Q5TGU0 170 aa16.9■□□□□ 0.3
CACNA1A-257ENST00000638009 C8orf44Q96CB5 159 aa16.9■□□□□ 0.3
CACNA1A-257ENST00000638009 RNF7Q9UBF6 113 aa16.9■□□□□ 0.3
CACNA1A-257ENST00000638009 TRAV9-1A0A075B6T8 112 aa16.89■□□□□ 0.3
CACNA1A-257ENST00000638009 CEACAM4O75871 244 aa16.89■□□□□ 0.3
CACNA1A-257ENST00000638009 ATP6V0CP27449 155 aa16.89■□□□□ 0.3
CACNA1A-257ENST00000638009 ZNF645Q8N7E2 425 aa16.89■□□□□ 0.3
CACNA1A-257ENST00000638009 LINC00587B1AMM8 73 aa16.89■□□□□ 0.29
CACNA1A-257ENST00000638009 LINC00869P0C866 280 aa16.89■□□□□ 0.29
CACNA1A-257ENST00000638009 RAE1P78406 368 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-257ENST00000638009 TRBV23-1A0A0A0MS06 115 aa16.89■□□□□ 0.29
CACNA1A-257ENST00000638009 DTX2Q86UW9 622 aa16.89■□□□□ 0.29
CACNA1A-257ENST00000638009 GGACTQ9BVM4 153 aa16.89■□□□□ 0.29
CACNA1A-257ENST00000638009 DLL1O00548 723 aa16.89■□□□□ 0.29
CACNA1A-257ENST00000638009 OR8B12Q8NGG6 310 aa16.89■□□□□ 0.29
CACNA1A-257ENST00000638009 SERGEFQ9UGK8 458 aa16.89■□□□□ 0.29
CACNA1A-257ENST00000638009 RRHO14718 337 aa16.89■□□□□ 0.29
CACNA1A-257ENST00000638009 CLEC2AQ6UVW9 174 aa16.89■□□□□ 0.29
CACNA1A-257ENST00000638009 FZR1Q9UM11 496 aa16.89■□□□□ 0.29
CACNA1A-257ENST00000638009 IGHV3-43A0A0B4J1X8 118 aa16.89■□□□□ 0.29
CACNA1A-257ENST00000638009 IGHV3-43DP0DP04 118 aa16.89■□□□□ 0.29
CACNA1A-257ENST00000638009 PRSS53Q2L4Q9 553 aa16.89■□□□□ 0.29
CACNA1A-257ENST00000638009 CISD1Q9NZ45 108 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-257ENST00000638009 FFAR1O14842 300 aa16.89■□□□□ 0.29
CACNA1A-257ENST00000638009 ASB10Q8WXI3 467 aa16.89■□□□□ 0.29
CACNA1A-257ENST00000638009 ZNF430Q9H8G1 570 aaPredicted RBP16.89■□□□□ 0.29
CACNA1A-257ENST00000638009 GFRA1P56159 465 aa16.88■□□□□ 0.29
CACNA1A-257ENST00000638009 TMEM30AQ9NV96 361 aa16.88■□□□□ 0.29
CACNA1A-257ENST00000638009 VENTXO95231 258 aa16.88■□□□□ 0.29
CACNA1A-257ENST00000638009 GLIPR1P48060 266 aa16.88■□□□□ 0.29
CACNA1A-257ENST00000638009 GAGE2BQ13066 116 aa16.88■□□□□ 0.29
CACNA1A-257ENST00000638009 GAGE2EQ4V326 116 aa16.88■□□□□ 0.29
CACNA1A-257ENST00000638009 MS4A3Q96HJ5 214 aa16.88■□□□□ 0.29
CACNA1A-257ENST00000638009 GAGE2DQ9UEU5 116 aa16.88■□□□□ 0.29
CACNA1A-257ENST00000638009 OR2H1Q9GZK4 316 aa16.88■□□□□ 0.29
CACNA1A-257ENST00000638009 GPX4P36969 197 aaPredicted RBP16.88■□□□□ 0.29
CACNA1A-257ENST00000638009 CT83Q5H943 113 aa16.88■□□□□ 0.29
CACNA1A-257ENST00000638009 TMEM190Q8WZ59 177 aa16.88■□□□□ 0.29
CACNA1A-257ENST00000638009 ARL14EPLP0DKL9 152 aa16.88■□□□□ 0.29
CACNA1A-257ENST00000638009 AGERQ15109 404 aa16.88■□□□□ 0.29
CACNA1A-257ENST00000638009 PCGF1Q9BSM1 259 aa16.88■□□□□ 0.29
CACNA1A-257ENST00000638009 ALX4Q9H161 411 aaPredicted RBP16.88■□□□□ 0.29
CACNA1A-257ENST00000638009 CTSVO60911 334 aa16.88■□□□□ 0.29
CACNA1A-257ENST00000638009 SELENOPP49908 381 aa16.88■□□□□ 0.29
CACNA1A-257ENST00000638009 MMD2Q8IY49 270 aa16.88■□□□□ 0.29
CACNA1A-257ENST00000638009 PLXNB3Q9ULL4 1909 aa16.88■□□□□ 0.29
CACNA1A-257ENST00000638009 EML2O95834 649 aa16.87■□□□□ 0.29
CACNA1A-257ENST00000638009 V9GYH0 126 aa16.87■□□□□ 0.29
CACNA1A-257ENST00000638009 GCM2O75603 506 aaPredicted RBP16.87■□□□□ 0.29
CACNA1A-257ENST00000638009 CLDND2Q8NHS1 167 aa16.87■□□□□ 0.29
CACNA1A-257ENST00000638009 MPZL1O95297 269 aa16.87■□□□□ 0.29
CACNA1A-257ENST00000638009 ZNF117Q03924 483 aa16.87■□□□□ 0.29
CACNA1A-257ENST00000638009 ASCL4Q6XD76 172 aa16.87■□□□□ 0.29
CACNA1A-257ENST00000638009 DTX1Q86Y01 620 aa16.87■□□□□ 0.29
CACNA1A-257ENST00000638009 MS4A7Q9GZW8 240 aaPredicted RBP16.87■□□□□ 0.29
CACNA1A-257ENST00000638009 ANAPC1Q9H1A4 1944 aa16.87■□□□□ 0.29
CACNA1A-257ENST00000638009 TRAV8-6A0A0B4J262 113 aa16.87■□□□□ 0.29
CACNA1A-257ENST00000638009 K7ESM1 405 aa16.87■□□□□ 0.29
CACNA1A-257ENST00000638009 RPS11P62280 158 aaKnown RBP eCLIP16.87■□□□□ 0.29
CACNA1A-257ENST00000638009 KRTCAP3Q53RY4 240 aa16.87■□□□□ 0.29
CACNA1A-257ENST00000638009 GPBAR1Q8TDU6 330 aa16.87■□□□□ 0.29
CACNA1A-257ENST00000638009 SF3B6Q9Y3B4 125 aaKnown RBP16.87■□□□□ 0.29
CACNA1A-257ENST00000638009 NAPSAO96009 420 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms