RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 OR4C12Q96R67 309 aa14.19□□□□□ -0.14
CLN6-220ENST00000637450 TPRKBQ9Y3C4 175 aa14.19□□□□□ -0.14
CLN6-220ENST00000637450 TRIM64CA6NLI5 447 aa14.18□□□□□ -0.14
CLN6-220ENST00000637450 SLC25A17O43808 307 aa14.18□□□□□ -0.14
CLN6-220ENST00000637450 APOA2P02652 100 aa14.18□□□□□ -0.14
CLN6-220ENST00000637450 PSMA1P25786 263 aaKnown RBP14.18□□□□□ -0.14
CLN6-220ENST00000637450 SSBP2P81877 361 aaPredicted RBP14.18□□□□□ -0.14
CLN6-220ENST00000637450 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.18□□□□□ -0.14
CLN6-220ENST00000637450 GRPEL2Q8TAA5 225 aa14.18□□□□□ -0.14
CLN6-220ENST00000637450 MUC7Q8TAX7 377 aa14.18□□□□□ -0.14
CLN6-220ENST00000637450 NKX1-2Q9UD57 310 aaPredicted RBP14.18□□□□□ -0.14
CLN6-220ENST00000637450 H3BUA1 57 aa14.17□□□□□ -0.14
CLN6-220ENST00000637450 M0R1X1 148 aa14.17□□□□□ -0.14
CLN6-220ENST00000637450 DENRO43583 198 aaKnown RBP14.17□□□□□ -0.14
CLN6-220ENST00000637450 RGS10O43665 173 aa14.17□□□□□ -0.14
CLN6-220ENST00000637450 IGLV2-23P01705 113 aa14.17□□□□□ -0.14
CLN6-220ENST00000637450 CALRP27797 417 aaKnown RBP14.17□□□□□ -0.14
CLN6-220ENST00000637450 RANBP1P43487 201 aa14.17□□□□□ -0.14
CLN6-220ENST00000637450 SERPINB10P48595 397 aa14.17□□□□□ -0.14
CLN6-220ENST00000637450 FABP5Q01469 135 aa14.17□□□□□ -0.14
CLN6-220ENST00000637450 MLLT11Q13015 90 aaPredicted RBP14.17□□□□□ -0.14
CLN6-220ENST00000637450 PLA2G7Q13093 441 aa14.17□□□□□ -0.14
CLN6-220ENST00000637450 POC5Q8NA72 575 aa14.17□□□□□ -0.14
CLN6-220ENST00000637450 OR5T1Q8NG75 326 aa14.17□□□□□ -0.14
CLN6-220ENST00000637450 OR4A4PQ8NGN8 299 aa14.17□□□□□ -0.14
CLN6-220ENST00000637450 ELOVL1Q9BW60 279 aa14.17□□□□□ -0.14
CLN6-220ENST00000637450 RANGRFQ9HD47 186 aaPredicted RBP14.17□□□□□ -0.14
CLN6-220ENST00000637450 ZNF355PQ9NSJ1 428 aa14.17□□□□□ -0.14
CLN6-220ENST00000637450 SLC35D1Q9NTN3 355 aa14.17□□□□□ -0.14
CLN6-220ENST00000637450 KCNK7Q9Y2U2 307 aa14.17□□□□□ -0.14
CLN6-220ENST00000637450 V9GY05 133 aa14.17□□□□□ -0.14
CLN6-220ENST00000637450 SACSQ9NZJ4 4579 aa14.17□□□□□ -0.14
CLN6-220ENST00000637450 TMEM272A0A1B0GTI8 110 aa14.16□□□□□ -0.14
CLN6-220ENST00000637450 FABP7O15540 132 aa14.16□□□□□ -0.14
CLN6-220ENST00000637450 CNIH1O95406 144 aa14.16□□□□□ -0.14
CLN6-220ENST00000637450 CRYGBP07316 175 aa14.16□□□□□ -0.14
CLN6-220ENST00000637450 LGALS7P47929 136 aa14.16□□□□□ -0.14
CLN6-220ENST00000637450 PSMD7P51665 324 aa14.16□□□□□ -0.14
CLN6-220ENST00000637450 AQP4P55087 323 aa14.16□□□□□ -0.14
CLN6-220ENST00000637450 PJVKQ0ZLH3 352 aa14.16□□□□□ -0.14
CLN6-220ENST00000637450 CASC10Q5T4H9 136 aa14.16□□□□□ -0.14
CLN6-220ENST00000637450 RAB22AQ9UL26 194 aa14.16□□□□□ -0.14
CLN6-220ENST00000637450 STUB1Q9UNE7 303 aa14.16□□□□□ -0.14
CLN6-220ENST00000637450 A0A0G2JLM5 398 aa14.15□□□□□ -0.14
CLN6-220ENST00000637450 C13orf42A0A1B0GVH6 325 aa14.15□□□□□ -0.14
CLN6-220ENST00000637450 ANKRD65E5RJM6 399 aa14.15□□□□□ -0.14
CLN6-220ENST00000637450 IGLV1-51P01701 117 aa14.15□□□□□ -0.14
CLN6-220ENST00000637450 CD3GP09693 182 aa14.15□□□□□ -0.14
CLN6-220ENST00000637450 IGSF11Q5DX21 431 aa14.15□□□□□ -0.14
CLN6-220ENST00000637450 HAPLN4Q86UW8 402 aa14.15□□□□□ -0.14
CLN6-220ENST00000637450 Q8N1Y9 231 aa14.15□□□□□ -0.14
CLN6-220ENST00000637450 NRG4Q8WWG1 115 aa14.15□□□□□ -0.14
CLN6-220ENST00000637450 TMEM68Q96MH6 324 aa14.15□□□□□ -0.14
CLN6-220ENST00000637450 MGLLQ99685 303 aa14.15□□□□□ -0.14
CLN6-220ENST00000637450 ZMAT4Q9H898 229 aa14.15□□□□□ -0.14
CLN6-220ENST00000637450 ACOT13Q9NPJ3 140 aa14.15□□□□□ -0.14
CLN6-220ENST00000637450 SDHAF2Q9NX18 166 aa14.15□□□□□ -0.14
CLN6-220ENST00000637450 TRBV6-7A0A0A0MS04 114 aa14.14□□□□□ -0.15
CLN6-220ENST00000637450 BET1O15155 118 aa14.14□□□□□ -0.15
CLN6-220ENST00000637450 BRI3O95415 125 aa14.14□□□□□ -0.15
CLN6-220ENST00000637450 GSTT2P0CG29 244 aa14.14□□□□□ -0.15
CLN6-220ENST00000637450 GSTT2BP0CG30 244 aa14.14□□□□□ -0.15
CLN6-220ENST00000637450 ZP3P21754 424 aa14.14□□□□□ -0.15
CLN6-220ENST00000637450 MRPS15P82914 257 aaKnown RBP14.14□□□□□ -0.15
CLN6-220ENST00000637450 KLF5Q13887 457 aaPredicted RBP14.14□□□□□ -0.15
CLN6-220ENST00000637450 SRSF7Q16629 238 aaKnown RBP eCLIP14.14□□□□□ -0.15
CLN6-220ENST00000637450 HES5Q5TA89 166 aa14.14□□□□□ -0.15
CLN6-220ENST00000637450 PRSS48Q7RTY5 328 aa14.14□□□□□ -0.15
CLN6-220ENST00000637450 OR10J5Q8NHC4 309 aa14.14□□□□□ -0.15
CLN6-220ENST00000637450 RAB3CQ96E17 227 aa14.14□□□□□ -0.15
CLN6-220ENST00000637450 CABLES2Q9BTV7 478 aa14.14□□□□□ -0.15
CLN6-220ENST00000637450 CCDC90BQ9GZT6 254 aa14.14□□□□□ -0.15
CLN6-220ENST00000637450 OR2D2Q9H210 308 aa14.14□□□□□ -0.15
CLN6-220ENST00000637450 SRRM4A7MD48 611 aaKnown RBP14.13□□□□□ -0.15
CLN6-220ENST00000637450 DIRAS3O95661 229 aa14.13□□□□□ -0.15
CLN6-220ENST00000637450 FCGR3AP08637 254 aa14.13□□□□□ -0.15
CLN6-220ENST00000637450 CRHBPP24387 322 aa14.13□□□□□ -0.15
CLN6-220ENST00000637450 MAP2K4P45985 399 aa14.13□□□□□ -0.15
CLN6-220ENST00000637450 TAGLNQ01995 201 aaKnown RBP14.13□□□□□ -0.15
CLN6-220ENST00000637450 MOGAT2Q3SYC2 334 aa14.13□□□□□ -0.15
CLN6-220ENST00000637450 TMEM177Q53S58 311 aa14.13□□□□□ -0.15
CLN6-220ENST00000637450 ANKRD13BQ86YJ7 626 aa14.13□□□□□ -0.15
CLN6-220ENST00000637450 C5orf30Q96GV9 206 aa14.13□□□□□ -0.15
CLN6-220ENST00000637450 HARBI1Q96MB7 349 aa14.13□□□□□ -0.15
CLN6-220ENST00000637450 RSRP1Q9BUV0 290 aa14.13□□□□□ -0.15
CLN6-220ENST00000637450 STARD9Q9P2P6 4700 aa14.13□□□□□ -0.15
CLN6-220ENST00000637450 LYSTQ99698 3801 aa14.12□□□□□ -0.15
CLN6-220ENST00000637450 ANKRD34BA5PLL1 514 aa14.12□□□□□ -0.15
CLN6-220ENST00000637450 A8MZ25 164 aa14.12□□□□□ -0.15
CLN6-220ENST00000637450 IGHV4-30-4P0DP06 118 aa14.12□□□□□ -0.15
CLN6-220ENST00000637450 MRGPRG-AS1Q2M3A8 158 aa14.12□□□□□ -0.15
CLN6-220ENST00000637450 IL34Q6ZMJ4 242 aa14.12□□□□□ -0.15
CLN6-220ENST00000637450 BVESQ8NE79 360 aa14.12□□□□□ -0.15
CLN6-220ENST00000637450 OR10R2Q8NGX6 335 aa14.12□□□□□ -0.15
CLN6-220ENST00000637450 TM2D3Q9BRN9 247 aa14.12□□□□□ -0.15
CLN6-220ENST00000637450 TINAGL1Q9GZM7 467 aaPredicted RBP14.12□□□□□ -0.15
CLN6-220ENST00000637450 C19orf73Q9NVV2 129 aa14.12□□□□□ -0.15
CLN6-220ENST00000637450 TENM2Q9NT68 2774 aa14.12□□□□□ -0.15
CLN6-220ENST00000637450 TRAV1-2A0A0B4J238 106 aa14.11□□□□□ -0.15
CLN6-220ENST00000637450 GNB3P16520 340 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms