RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 C14orf144Q96I85 54 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 OR5B12Q96R08 314 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 DIRC2Q96SL1 478 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 OR2J1Q9GZK6 312 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 PLA2G3Q9NZ20 509 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 TSTD3H0UI37 97 aa12.19□□□□□ -0.46
CLN6-215ENST00000636674 PSPNO60542 156 aa12.19□□□□□ -0.46
CLN6-215ENST00000636674 WISP2O76076 250 aa12.19□□□□□ -0.46
CLN6-215ENST00000636674 S1PR2O95136 353 aa12.19□□□□□ -0.46
CLN6-215ENST00000636674 TYMSP04818 313 aa12.19□□□□□ -0.46
CLN6-215ENST00000636674 SELEP16581 610 aa12.19□□□□□ -0.46
CLN6-215ENST00000636674 IL2RGP31785 369 aa12.19□□□□□ -0.46
CLN6-215ENST00000636674 OR3A1P47881 315 aa12.19□□□□□ -0.46
CLN6-215ENST00000636674 COL10A1Q03692 680 aa12.19□□□□□ -0.46
CLN6-215ENST00000636674 DTD1Q8TEA8 209 aa12.19□□□□□ -0.46
CLN6-215ENST00000636674 S100PBPQ96BU1 408 aa12.19□□□□□ -0.46
CLN6-215ENST00000636674 RPUSD4Q96CM3 377 aaKnown RBP12.19□□□□□ -0.46
CLN6-215ENST00000636674 ACY3Q96HD9 319 aa12.19□□□□□ -0.46
CLN6-215ENST00000636674 NPCDR1Q9BY65 106 aa12.19□□□□□ -0.46
CLN6-215ENST00000636674 FOXJ2Q9P0K8 574 aa12.19□□□□□ -0.46
CLN6-215ENST00000636674 CLN8Q9UBY8 286 aa12.19□□□□□ -0.46
CLN6-215ENST00000636674 ZNF891A8MT65 544 aaPredicted RBP12.18□□□□□ -0.46
CLN6-215ENST00000636674 PPP5D1E7EU14 171 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 KLRC4-KLRK1H3BQV0 150 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 SOX15O60248 233 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 GGCTO75223 188 aaKnown RBP12.18□□□□□ -0.46
CLN6-215ENST00000636674 KRASP01116 189 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 BRWD1-AS2P59051 145 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 GNB2P62879 340 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 SLC10A1Q14973 349 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 FFAR4Q5NUL3 377 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 FAM180AQ6UWF9 173 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 ZNF66Q6ZN08 573 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 LINC00696Q6ZRV3 163 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 REC114Q7Z4M0 266 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 WDR31Q8NA23 367 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 PRR7Q8TB68 274 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 TMEM170AQ8WVE7 144 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 WDYHV1Q96HA8 205 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 TAAR6Q96RI8 345 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 GAB2Q9UQC2 676 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 MKRN2OSH3BPM6 223 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 ZG16O60844 167 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 HBZP02008 142 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 AMBPP02760 352 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 CELA3BP08861 270 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 GZMHP20718 246 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 DDTP30046 118 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 SRP14P37108 136 aaKnown RBP12.18□□□□□ -0.46
CLN6-215ENST00000636674 SLC25A40Q8TBP6 338 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 RAB24Q969Q5 203 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 NEIL1Q96FI4 390 aaPredicted RBP12.18□□□□□ -0.46
CLN6-215ENST00000636674 DOCK7Q96N67 2140 aa12.18□□□□□ -0.46
CLN6-215ENST00000636674 C17orf98A8MV24 154 aa12.17□□□□□ -0.46
CLN6-215ENST00000636674 C17orf112F2Z3M2 114 aa12.17□□□□□ -0.46
CLN6-215ENST00000636674 LY86O95711 162 aa12.17□□□□□ -0.46
CLN6-215ENST00000636674 TFF3Q07654 80 aa12.17□□□□□ -0.46
CLN6-215ENST00000636674 ZNF816Q0VGE8 651 aaPredicted RBP12.17□□□□□ -0.46
CLN6-215ENST00000636674 AARDQ4LEZ3 155 aa12.17□□□□□ -0.46
CLN6-215ENST00000636674 ACTL10Q5JWF8 245 aa12.17□□□□□ -0.46
CLN6-215ENST00000636674 OR4F5Q8NH21 305 aa12.17□□□□□ -0.46
CLN6-215ENST00000636674 OR4F4Q96R69 305 aa12.17□□□□□ -0.46
CLN6-215ENST00000636674 PTPRBP23467 1997 aa12.17□□□□□ -0.46
CLN6-215ENST00000636674 CNOT1A5YKK6 2376 aaKnown RBP12.17□□□□□ -0.46
CLN6-215ENST00000636674 GYPAP02724 150 aa12.16□□□□□ -0.46
CLN6-215ENST00000636674 ERVS71-1P61550 626 aa12.16□□□□□ -0.46
CLN6-215ENST00000636674 PSG7Q13046 419 aa12.16□□□□□ -0.46
CLN6-215ENST00000636674 ALKBH6Q3KRA9 238 aa12.16□□□□□ -0.46
CLN6-215ENST00000636674 ZNF709Q8N972 641 aa12.16□□□□□ -0.46
CLN6-215ENST00000636674 OR52L2PQ8NGH6 319 aa12.16□□□□□ -0.46
CLN6-215ENST00000636674 RAB1CQ92928 201 aa12.16□□□□□ -0.46
CLN6-215ENST00000636674 NINJ1Q92982 152 aa12.16□□□□□ -0.46
CLN6-215ENST00000636674 COQ2Q96H96 371 aa12.16□□□□□ -0.46
CLN6-215ENST00000636674 GMPPAQ96IJ6 420 aaPredicted RBP12.16□□□□□ -0.46
CLN6-215ENST00000636674 USF3Q68DE3 2245 aa12.16□□□□□ -0.46
CLN6-215ENST00000636674 A0A1W2PNU3 283 aaPredicted RBP12.16□□□□□ -0.46
CLN6-215ENST00000636674 CDX4O14627 284 aaPredicted RBP12.16□□□□□ -0.46
CLN6-215ENST00000636674 MLNRO43193 412 aa12.16□□□□□ -0.46
CLN6-215ENST00000636674 CD99P14209 185 aa12.16□□□□□ -0.46
CLN6-215ENST00000636674 CEBPDP49716 269 aaPredicted RBP12.16□□□□□ -0.46
CLN6-215ENST00000636674 PAX5Q02548 391 aa12.16□□□□□ -0.46
CLN6-215ENST00000636674 ACOT6Q3I5F7 207 aaPredicted RBP12.16□□□□□ -0.46
CLN6-215ENST00000636674 Q8N7P7 452 aa12.16□□□□□ -0.46
CLN6-215ENST00000636674 HSD17B10Q99714 261 aaKnown RBP12.16□□□□□ -0.46
CLN6-215ENST00000636674 UFSP2Q9NUQ7 469 aa12.16□□□□□ -0.46
CLN6-215ENST00000636674 SPRR3Q9UBC9 169 aa12.16□□□□□ -0.46
CLN6-215ENST00000636674 DCHS1Q96JQ0 3298 aa12.15□□□□□ -0.46
CLN6-215ENST00000636674 HMGB3O15347 200 aaKnown RBP12.15□□□□□ -0.46
CLN6-215ENST00000636674 TMPRSS2O15393 492 aa12.15□□□□□ -0.46
CLN6-215ENST00000636674 IDH3GP51553 393 aaPredicted RBP12.15□□□□□ -0.46
CLN6-215ENST00000636674 UBE2NP61088 152 aaKnown RBP12.15□□□□□ -0.46
CLN6-215ENST00000636674 LCN2P80188 198 aa12.15□□□□□ -0.46
CLN6-215ENST00000636674 TGFBR3Q03167 851 aa12.15□□□□□ -0.46
CLN6-215ENST00000636674 H2BFWTQ7Z2G1 175 aa12.15□□□□□ -0.46
CLN6-215ENST00000636674 C11orf53Q8IXP5 236 aa12.15□□□□□ -0.46
CLN6-215ENST00000636674 ZNF808Q8N4W9 903 aaPredicted RBP12.15□□□□□ -0.46
CLN6-215ENST00000636674 CISD2Q8N5K1 135 aaKnown RBP12.15□□□□□ -0.46
CLN6-215ENST00000636674 FAM216AQ8WUB2 273 aa12.15□□□□□ -0.46
CLN6-215ENST00000636674 GATAD1Q8WUU5 269 aa12.15□□□□□ -0.46
CLN6-215ENST00000636674 ZDHHC16Q969W1 377 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms