RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 DCSTAMPQ9H295 470 aa14.27□□□□□ -0.13
CLN6-210ENST00000635747 METTL1Q9UBP6 276 aaKnown RBP14.27□□□□□ -0.13
CLN6-210ENST00000635747 ZNF230Q9UIE0 474 aaPredicted RBP14.27□□□□□ -0.13
CLN6-210ENST00000635747 VSIG4Q9Y279 399 aa14.27□□□□□ -0.13
CLN6-210ENST00000635747 CTXN2P0C2S0 81 aa14.26□□□□□ -0.13
CLN6-210ENST00000635747 SDC2P34741 201 aa14.26□□□□□ -0.13
CLN6-210ENST00000635747 LGALS7P47929 136 aa14.26□□□□□ -0.13
CLN6-210ENST00000635747 RAB9AP51151 201 aa14.26□□□□□ -0.13
CLN6-210ENST00000635747 RAB25P57735 213 aa14.26□□□□□ -0.13
CLN6-210ENST00000635747 PSG5Q15238 335 aa14.26□□□□□ -0.13
CLN6-210ENST00000635747 HACD4Q5VWC8 232 aa14.26□□□□□ -0.13
CLN6-210ENST00000635747 PYHIN1Q6K0P9 492 aa14.26□□□□□ -0.13
CLN6-210ENST00000635747 ZNF491Q8N8L2 437 aa14.26□□□□□ -0.13
CLN6-210ENST00000635747 DUX3Q96PT4 197 aa14.26□□□□□ -0.13
CLN6-210ENST00000635747 SLC35D1Q9NTN3 355 aa14.26□□□□□ -0.13
CLN6-210ENST00000635747 FOXA2Q9Y261 457 aaPredicted RBP14.26□□□□□ -0.13
CLN6-210ENST00000635747 FCN1O00602 326 aa14.25□□□□□ -0.13
CLN6-210ENST00000635747 TMEM127O75204 238 aa14.25□□□□□ -0.13
CLN6-210ENST00000635747 IGKV1-16P04430 117 aa14.25□□□□□ -0.13
CLN6-210ENST00000635747 RRASP10301 218 aa14.25□□□□□ -0.13
CLN6-210ENST00000635747 CD36P16671 472 aa14.25□□□□□ -0.13
CLN6-210ENST00000635747 CD40LGP29965 261 aa14.25□□□□□ -0.13
CLN6-210ENST00000635747 RUNX1Q01196 453 aa14.25□□□□□ -0.13
CLN6-210ENST00000635747 AKIRIN2Q53H80 203 aa14.25□□□□□ -0.13
CLN6-210ENST00000635747 ABHD5Q8WTS1 349 aa14.25□□□□□ -0.13
CLN6-210ENST00000635747 MAFIPQ8WZ33 124 aa14.25□□□□□ -0.13
CLN6-210ENST00000635747 ADTRPQ96IZ2 230 aa14.25□□□□□ -0.13
CLN6-210ENST00000635747 KLK15Q9H2R5 256 aa14.25□□□□□ -0.13
CLN6-210ENST00000635747 SDHAF2Q9NX18 166 aa14.25□□□□□ -0.13
CLN6-210ENST00000635747 NUBP2Q9Y5Y2 271 aa14.25□□□□□ -0.13
CLN6-210ENST00000635747 LOC100506127A0A0U1RQW1 187 aa14.24□□□□□ -0.13
CLN6-210ENST00000635747 KIAA0141Q14154 515 aaPredicted RBP14.24□□□□□ -0.13
CLN6-210ENST00000635747 NEDD8Q15843 81 aa14.24□□□□□ -0.13
CLN6-210ENST00000635747 ECSCRQ19T08 205 aa14.24□□□□□ -0.13
CLN6-210ENST00000635747 DEFB136Q30KP8 78 aa14.24□□□□□ -0.13
CLN6-210ENST00000635747 TIMM50Q3ZCQ8 353 aa14.24□□□□□ -0.13
CLN6-210ENST00000635747 PPP1R27Q86WC6 154 aa14.24□□□□□ -0.13
CLN6-210ENST00000635747 OR11H1Q8NG94 326 aa14.24□□□□□ -0.13
CLN6-210ENST00000635747 ST6GALNAC5Q9BVH7 336 aa14.24□□□□□ -0.13
CLN6-210ENST00000635747 ETV7Q9Y603 341 aa14.24□□□□□ -0.13
CLN6-210ENST00000635747 A0A1W2PN81 502 aa14.23□□□□□ -0.13
CLN6-210ENST00000635747 I3L521 148 aa14.23□□□□□ -0.13
CLN6-210ENST00000635747 OR8U8P0C7N1 319 aa14.23□□□□□ -0.13
CLN6-210ENST00000635747 SNRPBP14678 240 aaKnown RBP14.23□□□□□ -0.13
CLN6-210ENST00000635747 HOXD3P31249 432 aaPredicted RBP14.23□□□□□ -0.13
CLN6-210ENST00000635747 CHRNA7P36544 502 aa14.23□□□□□ -0.13
CLN6-210ENST00000635747 GNG2P59768 71 aa14.23□□□□□ -0.13
CLN6-210ENST00000635747 KRTAP10-11P60412 298 aa14.23□□□□□ -0.13
CLN6-210ENST00000635747 NDPQ00604 133 aa14.23□□□□□ -0.13
CLN6-210ENST00000635747 MXD1Q05195 221 aa14.23□□□□□ -0.13
CLN6-210ENST00000635747 DCTN2Q13561 401 aaKnown RBP14.23□□□□□ -0.13
CLN6-210ENST00000635747 FHL3Q13643 280 aa14.23□□□□□ -0.13
CLN6-210ENST00000635747 RTL8BQ17RB0 113 aa14.23□□□□□ -0.13
CLN6-210ENST00000635747 C19orf54Q5BKX5 351 aa14.23□□□□□ -0.13
CLN6-210ENST00000635747 C9orf66Q5T8R8 295 aa14.23□□□□□ -0.13
CLN6-210ENST00000635747 H1FOOQ8IZA3 346 aaPredicted RBP14.23□□□□□ -0.13
CLN6-210ENST00000635747 LGALS14Q8TCE9 139 aa14.23□□□□□ -0.13
CLN6-210ENST00000635747 CLCC1Q96S66 551 aa14.23□□□□□ -0.13
CLN6-210ENST00000635747 MRPS26Q9BYN8 205 aaKnown RBP14.23□□□□□ -0.13
CLN6-210ENST00000635747 RHBDL2Q9NX52 303 aa14.23□□□□□ -0.13
CLN6-210ENST00000635747 A0A0A6YYH2 397 aa14.22□□□□□ -0.13
CLN6-210ENST00000635747 A6NJ64 397 aa14.22□□□□□ -0.13
CLN6-210ENST00000635747 SLC25A17O43808 307 aa14.22□□□□□ -0.13
CLN6-210ENST00000635747 RAMP3O60896 148 aa14.22□□□□□ -0.13
CLN6-210ENST00000635747 SLC22A5O76082 557 aa14.22□□□□□ -0.13
CLN6-210ENST00000635747 CA2P00918 260 aa14.22□□□□□ -0.13
CLN6-210ENST00000635747 SMIM18P0DKX4 95 aa14.22□□□□□ -0.13
CLN6-210ENST00000635747 LINC00205P59089 165 aa14.22□□□□□ -0.13
CLN6-210ENST00000635747 ZNF616Q08AN1 781 aa14.22□□□□□ -0.13
CLN6-210ENST00000635747 ZNF260Q3ZCT1 412 aa14.22□□□□□ -0.13
CLN6-210ENST00000635747 ACTBL2Q562R1 376 aa14.22□□□□□ -0.13
CLN6-210ENST00000635747 CNIH2Q6PI25 160 aa14.22□□□□□ -0.13
CLN6-210ENST00000635747 OR1N2Q8NGR9 330 aa14.22□□□□□ -0.13
CLN6-210ENST00000635747 ELF5Q9UKW6 265 aaPredicted RBP14.22□□□□□ -0.13
CLN6-210ENST00000635747 FBXO7Q9Y3I1 522 aa14.22□□□□□ -0.13
CLN6-210ENST00000635747 A3GALT2U3KPV4 340 aa14.22□□□□□ -0.13
CLN6-210ENST00000635747 TMEM235A6NFC5 223 aa14.21□□□□□ -0.13
CLN6-210ENST00000635747 EGR2P11161 476 aaPredicted RBP14.21□□□□□ -0.13
CLN6-210ENST00000635747 DGCR2P98153 550 aa14.21□□□□□ -0.13
CLN6-210ENST00000635747 FXYD3Q14802 87 aa14.21□□□□□ -0.13
CLN6-210ENST00000635747 TMEM177Q53S58 311 aa14.21□□□□□ -0.13
CLN6-210ENST00000635747 IDNKQ5T6J7 187 aa14.21□□□□□ -0.13
CLN6-210ENST00000635747 UNQ5815/PRO19632Q6UWF5 114 aa14.21□□□□□ -0.13
CLN6-210ENST00000635747 CROCCP3Q8IVE0 287 aa14.21□□□□□ -0.13
CLN6-210ENST00000635747 ARPC1AQ92747 370 aa14.21□□□□□ -0.13
CLN6-210ENST00000635747 HARBI1Q96MB7 349 aa14.21□□□□□ -0.13
CLN6-210ENST00000635747 SLA2Q9H6Q3 261 aa14.21□□□□□ -0.13
CLN6-210ENST00000635747 GNB4Q9HAV0 340 aa14.21□□□□□ -0.13
CLN6-210ENST00000635747 IGKV1D-8A0A087WSZ0 117 aa14.2□□□□□ -0.14
CLN6-210ENST00000635747 K7EIL1 84 aa14.2□□□□□ -0.14
CLN6-210ENST00000635747 SHOXO15266 292 aa14.2□□□□□ -0.14
CLN6-210ENST00000635747 CNIH1O95406 144 aa14.2□□□□□ -0.14
CLN6-210ENST00000635747 LUMP51884 338 aaPredicted RBP14.2□□□□□ -0.14
CLN6-210ENST00000635747 DEFB121Q5J5C9 76 aa14.2□□□□□ -0.14
CLN6-210ENST00000635747 LFNGQ8NES3 379 aa14.2□□□□□ -0.14
CLN6-210ENST00000635747 NUDCD2Q8WVJ2 157 aa14.2□□□□□ -0.14
CLN6-210ENST00000635747 TMEM68Q96MH6 324 aa14.2□□□□□ -0.14
CLN6-210ENST00000635747 DIABLOQ9NR28 239 aa14.2□□□□□ -0.14
CLN6-210ENST00000635747 OR2W1Q9Y3N9 320 aa14.2□□□□□ -0.14
CLN6-210ENST00000635747 WI2-2373I1.2A0A1W2PRP0 233 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms