RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 C22orf42Q6IC83 251 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 DUX4L9Q6RFH8 374 aaPredicted RBP1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 LYPD2Q6UXB3 125 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 ZNF620Q6ZNG0 422 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 WDR86Q86TI4 376 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 SLC30A8Q8IWU4 369 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 MICU2Q8IYU8 434 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 PUSL1Q8N0Z8 303 aaKnown RBP1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 LRRC18Q8N456 261 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 Q8N7P7 452 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 SLC26A10Q8NG04 563 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 OR8G5Q8NG78 346 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 OR2Z1Q8NG97 314 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 OR52E2Q8NGJ4 325 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 OR4A4PQ8NGN8 299 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 OR1S2Q8NGQ3 325 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 OR9G1Q8NH87 305 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 ZNF420Q8TAQ5 688 aaPredicted RBP1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 PIFOQ8TCI5 191 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 TMEM239Q8WW34 195 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 SLC7A6Q92536 515 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 C16orf74Q96GX8 76 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 PRRC1Q96M27 445 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 CGREF1Q99674 301 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 SLC29A1Q99808 456 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 FGF23Q9GZV9 251 aaPredicted RBP1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 HDHD2Q9H0R4 259 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 DNTTIP1Q9H147 329 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 TLNRD1Q9H1K6 362 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 NANOGQ9H9S0 305 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 BEX1Q9HBH7 125 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 PLGRKTQ9HBL7 147 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 FGF20Q9NP95 211 aaPredicted RBP1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 UBAP1Q9NZ09 502 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 STX18Q9P2W9 335 aaKnown RBP1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 XCL2Q9UBD3 114 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 RPS6KB2Q9UBS0 482 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 DUX4Q9UBX2 424 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 OR5V1Q9UGF6 321 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 TBC1D24Q9ULP9 559 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 ANGPT4Q9Y264 503 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 USH1CQ9Y6N9 552 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 DNAH2Q9P225 4427 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 DNAH10Q8IVF4 4471 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 TRAV27A0A087WT01 109 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 A0A087WUU8 490 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 TRBV9A0A0B4J1U6 114 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 KIR2DL5BA0A0G2JN68 375 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 KIR2DL5BA0A0G2JPC4 375 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 LOC100653049A0A140TA62 436 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 KBTBD11-OT1A0A1B0GTJ5 212 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 PRSS37A4D1T9 235 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 PSMB11A5LHX3 300 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 ZNF726A6NNF4 738 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 C12orf71A8MTZ7 269 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 VGLL3A8MV65 326 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 C5orf58C9J3I9 102 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 F5H5P2 479 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 RNASEK-C17orf49H0YIS7 233 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 H7C1C5 153 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 M0QX08 132 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 RER1O15258 196 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 PIN1P1O15428 100 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 SLC31A2O15432 143 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 SGCEO43556 437 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 SHOX2O60902 331 aaPredicted RBP1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 SERPINB7O75635 380 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 EIF3GO75821 320 aaKnown RBP eCLIP1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 MMP23AO75900 390 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 KRT34O76011 436 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 ALDOBP05062 364 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 CD14P08571 375 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 ACSM4P0C7M7 580 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 NR2C1P13056 603 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 GSTM3P21266 225 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 FMO3P31513 532 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 OMPP47874 163 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 SUB1P53999 127 aaKnown RBP eCLIP1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 PCBD1P61457 104 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 LCN6P62502 163 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 RAP1AP62834 184 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 GNB2P62879 340 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 ELF3P78545 371 aaPredicted RBP1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 PRKCDQ05655 676 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 KRR1Q13601 381 aaKnown RBP1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 LDLRAD2Q5SZI1 272 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 RSBN1Q5VWQ0 802 aaPredicted RBP1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 TTC33Q6PID6 262 aaPredicted RBP1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 C11orf53Q8IXP5 236 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 KIR2DL5AQ8N109 375 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 PNKDQ8N490 385 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 C11orf42Q8N5U0 333 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 LINC00612Q8N6U2 182 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 OR8J3Q8NGG0 315 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 OR8B3Q8NGG8 313 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 OR13G1Q8NGZ3 307 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 KIR2DL5BQ8NHK3 375 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 SLC7A13Q8TCU3 470 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 GLYATL2Q8WU03 294 aa1.72□□□□□ -2.13
SMARCB1-208ENST00000634926 C17orf50Q8WW18 174 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms