RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 WSB1Q9Y6I7 421 aa12.33□□□□□ -0.44
LINC00339-207ENST00000634712 G3V4G9 280 aa12.32□□□□□ -0.44
LINC00339-207ENST00000634712 ATP6V0E1O15342 81 aa12.32□□□□□ -0.44
LINC00339-207ENST00000634712 SLC22A5O76082 557 aa12.32□□□□□ -0.44
LINC00339-207ENST00000634712 IGKV1-16P04430 117 aa12.32□□□□□ -0.44
LINC00339-207ENST00000634712 RRASP10301 218 aa12.32□□□□□ -0.44
LINC00339-207ENST00000634712 SLC6A1P30531 599 aa12.32□□□□□ -0.44
LINC00339-207ENST00000634712 CBX5P45973 191 aa12.32□□□□□ -0.44
LINC00339-207ENST00000634712 PSG5Q15238 335 aa12.32□□□□□ -0.44
LINC00339-207ENST00000634712 RTL8BQ17RB0 113 aa12.32□□□□□ -0.44
LINC00339-207ENST00000634712 TMEM69Q5SWH9 247 aa12.32□□□□□ -0.44
LINC00339-207ENST00000634712 ZNF660Q6AZW8 331 aaPredicted RBP12.32□□□□□ -0.44
LINC00339-207ENST00000634712 TMEM65Q6PI78 240 aa12.32□□□□□ -0.44
LINC00339-207ENST00000634712 MRPS26Q9BYN8 205 aaKnown RBP12.32□□□□□ -0.44
LINC00339-207ENST00000634712 ZNF580Q9UK33 172 aa12.32□□□□□ -0.44
LINC00339-207ENST00000634712 PLXNB1O43157 2135 aa12.32□□□□□ -0.44
LINC00339-207ENST00000634712 MEGF8Q7Z7M0 2845 aa12.32□□□□□ -0.44
LINC00339-207ENST00000634712 TRAV41A0A0B4J266 112 aa12.31□□□□□ -0.44
LINC00339-207ENST00000634712 SMIM31A0A1B0GVY4 71 aa12.31□□□□□ -0.44
LINC00339-207ENST00000634712 SPDEFO95238 335 aa12.31□□□□□ -0.44
LINC00339-207ENST00000634712 IGHG4P01861 327 aa12.31□□□□□ -0.44
LINC00339-207ENST00000634712 RPLP1P05386 114 aaKnown RBP12.31□□□□□ -0.44
LINC00339-207ENST00000634712 SMIM18P0DKX4 95 aa12.31□□□□□ -0.44
LINC00339-207ENST00000634712 LGALS7P47929 136 aa12.31□□□□□ -0.44
LINC00339-207ENST00000634712 RORCP51449 518 aa12.31□□□□□ -0.44
LINC00339-207ENST00000634712 CX3CL1P78423 397 aa12.31□□□□□ -0.44
LINC00339-207ENST00000634712 TMEM267Q0VDI3 215 aaPredicted RBP12.31□□□□□ -0.44
LINC00339-207ENST00000634712 HOGA1Q86XE5 327 aa12.31□□□□□ -0.44
LINC00339-207ENST00000634712 ZNF695Q8IW36 515 aa12.31□□□□□ -0.44
LINC00339-207ENST00000634712 ZNF645Q8N7E2 425 aa12.31□□□□□ -0.44
LINC00339-207ENST00000634712 GVQW1Q8N7I0 195 aa12.31□□□□□ -0.44
LINC00339-207ENST00000634712 BVESQ8NE79 360 aa12.31□□□□□ -0.44
LINC00339-207ENST00000634712 IFT46Q9NQC8 304 aa12.31□□□□□ -0.44
LINC00339-207ENST00000634712 COMMD3Q9UBI1 195 aa12.31□□□□□ -0.44
LINC00339-207ENST00000634712 NOTCH1P46531 2555 aa12.31□□□□□ -0.44
LINC00339-207ENST00000634712 G3V318 75 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 FCN1O00602 326 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 SHOXO15266 292 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 SLC25A17O43808 307 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 HLA-DQB1P01920 261 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 ECSCRQ19T08 205 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 LCNL1Q6ZST4 164 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 C8orf86Q6ZUL3 223 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 ANKRD13BQ86YJ7 626 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 WFDC9Q8NEX5 89 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 ACOT12Q8WYK0 555 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 NECAP2Q9NVZ3 263 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 A3GALT2U3KPV4 340 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 TUSC2O75896 110 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 FCER2P06734 321 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 PTHLHP12272 177 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 DUTP33316 252 aaKnown RBP12.3□□□□□ -0.44
LINC00339-207ENST00000634712 MYCNOSP40205 109 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 CFHR3Q02985 330 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 OXLD1Q5BKU9 147 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 SAMD5Q5TGI4 173 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 GPR107Q5VW38 600 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 ZNF562Q6V9R5 426 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 C18orf65Q6ZTR6 163 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 GPR141Q7Z602 305 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 C5orf30Q96GV9 206 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 HARBI1Q96MB7 349 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 DCUN1D5Q9BTE7 237 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 PRELID3BQ9Y3B1 194 aa12.3□□□□□ -0.44
LINC00339-207ENST00000634712 NOTCH3Q9UM47 2321 aa12.29□□□□□ -0.44
LINC00339-207ENST00000634712 MEIS3P1A6NDR6 274 aa12.29□□□□□ -0.44
LINC00339-207ENST00000634712 CNIH1O95406 144 aa12.29□□□□□ -0.44
LINC00339-207ENST00000634712 CA2P00918 260 aa12.29□□□□□ -0.44
LINC00339-207ENST00000634712 PSMB8P28062 276 aa12.29□□□□□ -0.44
LINC00339-207ENST00000634712 CD40LGP29965 261 aa12.29□□□□□ -0.44
LINC00339-207ENST00000634712 FCGR2CP31995 323 aa12.29□□□□□ -0.44
LINC00339-207ENST00000634712 CDX1P47902 265 aaPredicted RBP12.29□□□□□ -0.44
LINC00339-207ENST00000634712 TAS2R20P59543 309 aa12.29□□□□□ -0.44
LINC00339-207ENST00000634712 MZT2AQ6P582 158 aa12.29□□□□□ -0.44
LINC00339-207ENST00000634712 PPP1R27Q86WC6 154 aa12.29□□□□□ -0.44
LINC00339-207ENST00000634712 RNF152Q8N8N0 203 aa12.29□□□□□ -0.44
LINC00339-207ENST00000634712 CMTM3Q96MX0 182 aa12.29□□□□□ -0.44
LINC00339-207ENST00000634712 MRPS7Q9Y2R9 242 aaKnown RBP12.29□□□□□ -0.44
LINC00339-207ENST00000634712 A0A1W2PN81 502 aa12.28□□□□□ -0.44
LINC00339-207ENST00000634712 WIPF1O43516 503 aa12.28□□□□□ -0.44
LINC00339-207ENST00000634712 GABARAPO95166 117 aa12.28□□□□□ -0.44
LINC00339-207ENST00000634712 CRYZL1O95825 349 aa12.28□□□□□ -0.44
LINC00339-207ENST00000634712 IGLL1P15814 213 aa12.28□□□□□ -0.44
LINC00339-207ENST00000634712 PPIFP30405 207 aaKnown RBP12.28□□□□□ -0.44
LINC00339-207ENST00000634712 PRSS3P35030 304 aa12.28□□□□□ -0.44
LINC00339-207ENST00000634712 CHRNA7P36544 502 aa12.28□□□□□ -0.44
LINC00339-207ENST00000634712 GNB1P62873 340 aa12.28□□□□□ -0.44
LINC00339-207ENST00000634712 FXYD3Q14802 87 aa12.28□□□□□ -0.44
LINC00339-207ENST00000634712 BEAN1Q3B7T3 259 aa12.28□□□□□ -0.44
LINC00339-207ENST00000634712 VMA21Q3ZAQ7 101 aa12.28□□□□□ -0.44
LINC00339-207ENST00000634712 TMEM177Q53S58 311 aa12.28□□□□□ -0.44
LINC00339-207ENST00000634712 UNQ5815/PRO19632Q6UWF5 114 aa12.28□□□□□ -0.44
LINC00339-207ENST00000634712 TCTEX1D1Q8N7M0 179 aa12.28□□□□□ -0.44
LINC00339-207ENST00000634712 OR5AP2Q8NGF4 316 aa12.28□□□□□ -0.44
LINC00339-207ENST00000634712 AP3S1Q92572 193 aa12.28□□□□□ -0.44
LINC00339-207ENST00000634712 RCC1LQ96I51 464 aaKnown RBP12.28□□□□□ -0.44
LINC00339-207ENST00000634712 NAA50Q9GZZ1 169 aaKnown RBP12.28□□□□□ -0.44
LINC00339-207ENST00000634712 RBMX2Q9Y388 322 aaKnown RBP12.28□□□□□ -0.44
LINC00339-207ENST00000634712 IGKV1D-13A0A0B4J2D9 117 aa12.27□□□□□ -0.45
LINC00339-207ENST00000634712 LINC00473A8K010 186 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms